BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0212.p (204 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774743.1| thiosulfate reductase cytochrome subunit B [... 399 e-110 ref|YP_004750841.1| thiosulfate reductase cytochrome B subunit (... 265 2e-69 ref|ZP_04587822.2| hypothetical protein POR16_11046 [Pseudomonas... 251 5e-65 ref|ZP_03265147.1| conserved hypothetical protein [Burkholderia ... 244 4e-63 gb|EGH64634.1| hypothetical protein PSYAC_06920 [Pseudomonas syr... 242 3e-62 ref|NP_793380.1| hypothetical protein PSPTO_3601 [Pseudomonas sy... 242 3e-62 gb|EGH10710.1| hypothetical protein PSYMP_14559 [Pseudomonas syr... 241 4e-62 ref|ZP_06458584.1| HupC/HyaC/HydC family protein [Pseudomonas sy... 240 8e-62 gb|EGH91205.1| HupC/HyaC/HydC family protein [Pseudomonas syring... 240 9e-62 ref|YP_003607268.1| hypothetical protein BC1002_3735 [Burkholder... 240 9e-62 >ref|YP_003774743.1| thiosulfate reductase cytochrome subunit B [Herbaspirillum seropedicae SmR1] gb|ADJ62835.1| thiosulfate reductase cytochrome B subunit (membrane anchoring protein) protein [Herbaspirillum seropedicae SmR1] Length = 204 Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust. Identities = 201/204 (98%), Positives = 203/204 (99%) Query: 1 MSRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAW 60 MSRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASP+FPFKFASWMTLGGWLGGSIAW Sbjct: 1 MSRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPLFPFKFASWMTLGGWLGGSIAW 60 Query: 61 HFAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQ 120 HFAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALR +LPHQPGVYNAVQ Sbjct: 61 HFAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRLKLPHQPGVYNAVQ 120 Query: 121 KLLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLA 180 KLLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLA Sbjct: 121 KLLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLA 180 Query: 181 LVAIVPRTLIPMFTGGHDKKANAS 204 LVAIVPRTLIPMFTGGHDKKANAS Sbjct: 181 LVAIVPRTLIPMFTGGHDKKANAS 204 >ref|YP_004750841.1| thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Collimonas fungivorans Ter331] gb|AEK60018.1| Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Collimonas fungivorans Ter331] Length = 219 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 136/193 (70%), Positives = 158/193 (81%) Query: 3 RPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWHF 62 R ++HPL VRI HW+NAFAI CM+ SGW IYNASP+F F F W TLGGWLGG+IAWH Sbjct: 10 RAHIIHPLLVRIVHWINAFAIVCMVMSGWTIYNASPLFGFDFPRWATLGGWLGGAIAWHL 69 Query: 63 AAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQKL 122 AAMWLLVANGL Y+ YG L+GHFRRH LP+R ++ RDA AL F+L HQPG+YNAVQ+L Sbjct: 70 AAMWLLVANGLIYIGYGVLAGHFRRHFLPLRPRDLLRDATDALTFKLAHQPGIYNAVQRL 129 Query: 123 LYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLALV 182 +Y V+LLG+LVV SGL++WKPVQLD LADLFGG+D AR+VHF AMAGI AFV VHLALV Sbjct: 130 MYIIVLLLGVLVVASGLSIWKPVQLDVLADLFGGYDTARRVHFVAMAGIVAFVAVHLALV 189 Query: 183 AIVPRTLIPMFTG 195 IVP TL+PM TG Sbjct: 190 LIVPSTLLPMLTG 202 >ref|ZP_04587822.2| hypothetical protein POR16_11046 [Pseudomonas syringae pv. oryzae str. 1_6] ref|ZP_04592979.2| hypothetical protein POR16_37454 [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI02274.1| hypothetical protein POR16_11046 [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI07444.1| hypothetical protein POR16_37454 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 234 Score = 251 bits (641), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 122/203 (60%), Positives = 146/203 (71%), Gaps = 2/203 (0%) Query: 2 SRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWH 61 +RP +HP VR+ HW+NA + CM SGW IYNASP+ PF F ++TLGGWLGGSIAWH Sbjct: 31 TRP--IHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWH 88 Query: 62 FAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQK 121 FA MWLLV NGL Y+LY S HF+R LLPV +V RD AL FRL H G YNAVQ+ Sbjct: 89 FAVMWLLVINGLVYVLYSVFSRHFKRDLLPVSPSQVKRDMSDALHFRLAHVKGQYNAVQR 148 Query: 122 LLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLAL 181 L+YW V+++G+LVV+SGLA+WKPVQ L L GGFDFAR VHF AM I AFV+VHL L Sbjct: 149 LMYWLVLIMGVLVVVSGLAIWKPVQFQGLVALLGGFDFARWVHFGAMTAIGAFVIVHLLL 208 Query: 182 VAIVPRTLIPMFTGGHDKKANAS 204 V +VP TL+PM TGG + + Sbjct: 209 VMLVPSTLLPMITGGRQPNEDGA 231 >ref|ZP_03265147.1| conserved hypothetical protein [Burkholderia sp. H160] gb|EEA03225.1| conserved hypothetical protein [Burkholderia sp. H160] Length = 216 Score = 244 bits (624), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 135/191 (70%), Positives = 155/191 (81%) Query: 5 PVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWHFAA 64 P++HPL VR+ HW+NAFA+ CM+ SGW IYNASPIFPF+F W TLGGWLGGSIAWHFAA Sbjct: 8 PIVHPLVVRVTHWINAFAMVCMVMSGWAIYNASPIFPFRFPVWATLGGWLGGSIAWHFAA 67 Query: 65 MWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQKLLY 124 MWLL ANGL YL YG SGH + LLPVRA ++ RDA ALRFRLPH+ G YNAVQ+ LY Sbjct: 68 MWLLCANGLLYLAYGMASGHLQHKLLPVRARDMARDAALALRFRLPHESGKYNAVQRALY 127 Query: 125 WAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLALVAI 184 V+LLG+L+V SGL++WKPVQ WL LFGGFDFAR+VHF AMAG+ FVVVHL LV + Sbjct: 128 LLVLLLGVLLVASGLSIWKPVQFSWLTALFGGFDFARRVHFIAMAGVVGFVVVHLMLVLL 187 Query: 185 VPRTLIPMFTG 195 VPRTL PMFTG Sbjct: 188 VPRTLPPMFTG 198 >gb|EGH64634.1| hypothetical protein PSYAC_06920 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 206 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 127/203 (62%), Positives = 148/203 (72%), Gaps = 2/203 (0%) Query: 2 SRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWH 61 +RP +HP VR+ HW+NA + CM SGW IYNASP+ PF F ++TLGGWLGGSIAWH Sbjct: 3 TRP--IHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWH 60 Query: 62 FAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQK 121 FA MWLLV NGL Y+LYG S HFRR LLPVR EV RD AL FRL H G YNAVQ+ Sbjct: 61 FAVMWLLVVNGLIYVLYGVFSRHFRRDLLPVRPSEVKRDMSDALHFRLAHVKGQYNAVQR 120 Query: 122 LLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLAL 181 L+YW V+++G+LVV+SGLA+WKPVQ L L GGFDFAR VHF AM I AFVVVHL L Sbjct: 121 LMYWLVLIMGVLVVVSGLAIWKPVQFQGLVALLGGFDFARWVHFGAMTAIGAFVVVHLML 180 Query: 182 VAIVPRTLIPMFTGGHDKKANAS 204 V +VP TL+PM TGG + + Sbjct: 181 VVLVPSTLLPMITGGRQPNEDGT 203 >ref|NP_793380.1| hypothetical protein PSPTO_3601 [Pseudomonas syringae pv. tomato str. DC3000] ref|ZP_03397085.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07231237.1| hypothetical protein PsyrptM_09307 [Pseudomonas syringae pv. tomato Max13] ref|ZP_07254516.1| hypothetical protein PsyrptK_23564 [Pseudomonas syringae pv. tomato K40] ref|ZP_07260584.1| hypothetical protein PsyrptN_24587 [Pseudomonas syringae pv. tomato NCPPB 1108] gb|AAO57075.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] gb|EEB59799.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 206 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 127/203 (62%), Positives = 148/203 (72%), Gaps = 2/203 (0%) Query: 2 SRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWH 61 +RP +HP VR+ HW+NA + CM SGW IYNASP+ PF F ++TLGGWLGGSIAWH Sbjct: 3 TRP--IHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWH 60 Query: 62 FAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQK 121 FA MWLLV NGL Y+LYG S HFRR LLPVR EV RD AL FRL H G YNAVQ+ Sbjct: 61 FAVMWLLVVNGLIYVLYGVFSRHFRRDLLPVRPSEVKRDMSDALHFRLAHVKGQYNAVQR 120 Query: 122 LLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLAL 181 L+YW V+++G+LVV+SGLA+WKPVQ L L GGFDFAR VHF AM I AFVVVHL L Sbjct: 121 LMYWLVLIMGVLVVVSGLAIWKPVQFQGLVALLGGFDFARWVHFGAMTAIGAFVVVHLVL 180 Query: 182 VAIVPRTLIPMFTGGHDKKANAS 204 V +VP TL+PM TGG + + Sbjct: 181 VVLVPSTLLPMITGGRQPNEDGT 203 >gb|EGH10710.1| hypothetical protein PSYMP_14559 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 206 Score = 241 bits (615), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 127/203 (62%), Positives = 148/203 (72%), Gaps = 2/203 (0%) Query: 2 SRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWH 61 +RP +HP VR+ HW+NA + CM SGW IYNASP+ PF F ++TLGGWLGGSIAWH Sbjct: 3 TRP--IHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWH 60 Query: 62 FAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQK 121 FA MWLLV NGL Y+LYG S HFRR LLPVR EV RD AL FRL H G YNAVQ+ Sbjct: 61 FAVMWLLVINGLIYVLYGVFSRHFRRDLLPVRPSEVKRDMSDALHFRLAHVKGQYNAVQR 120 Query: 122 LLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLAL 181 L+YW V+++G+LVV+SGLA+WKPVQ L L GGFDFAR VHF AM I AFVVVHL L Sbjct: 121 LMYWLVLIMGVLVVVSGLAIWKPVQFQGLVALLGGFDFARWVHFGAMTAIGAFVVVHLVL 180 Query: 182 VAIVPRTLIPMFTGGHDKKANAS 204 V +VP TL+PM TGG + + Sbjct: 181 VVLVPSTLLPMITGGRQPNEDGT 203 >ref|ZP_06458584.1| HupC/HyaC/HydC family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gb|EGH03785.1| HupC/HyaC/HydC family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 206 Score = 240 bits (613), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 126/203 (62%), Positives = 148/203 (72%), Gaps = 2/203 (0%) Query: 2 SRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWH 61 +RP +HP VR+ HW+NA + CM SGW IYNASP+ PF F ++TLGGWLGGSIAWH Sbjct: 3 TRP--IHPWPVRLTHWVNALGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWH 60 Query: 62 FAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQK 121 FA MWLLV NGL Y+LYG S HF+R LLPVR EV RD AL FRL H G YNAVQ+ Sbjct: 61 FAVMWLLVINGLLYVLYGVFSRHFKRDLLPVRPSEVKRDMSDALHFRLAHVKGRYNAVQR 120 Query: 122 LLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLAL 181 L+YW V+++G+LVV+SGLA+WKPVQ L L GGFDFAR VHF AM I AFVVVHL L Sbjct: 121 LMYWLVLIMGVLVVVSGLAIWKPVQFQGLVALLGGFDFARWVHFGAMTAIGAFVVVHLVL 180 Query: 182 VAIVPRTLIPMFTGGHDKKANAS 204 V +VP TL+PM TGG + + Sbjct: 181 VVLVPSTLLPMITGGRQPNEDGT 203 >gb|EGH91205.1| HupC/HyaC/HydC family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 206 Score = 240 bits (613), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 126/203 (62%), Positives = 148/203 (72%), Gaps = 2/203 (0%) Query: 2 SRPPVLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWH 61 +RP +HP VR+ HW+NA + CM SGW IYNASP+ PF F ++TLGGWLGGSIAWH Sbjct: 3 TRP--IHPWPVRLTHWVNAVGMVCMFMSGWAIYNASPLMPFTFPKFLTLGGWLGGSIAWH 60 Query: 62 FAAMWLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQK 121 FA MWLLV NGL Y+LYG S HF+R LLPVR EV RD AL FRL H G YNAVQ+ Sbjct: 61 FAVMWLLVINGLLYVLYGVFSRHFKRDLLPVRPSEVKRDMSDALHFRLAHVKGRYNAVQR 120 Query: 122 LLYWAVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLAL 181 L+YW V+++G+LVV+SGLA+WKPVQ L L GGFDFAR VHF AM I AFVVVHL L Sbjct: 121 LMYWLVLIMGVLVVVSGLAIWKPVQFQGLVALLGGFDFARWVHFGAMTAIGAFVVVHLVL 180 Query: 182 VAIVPRTLIPMFTGGHDKKANAS 204 V +VP TL+PM TGG + + Sbjct: 181 VVLVPSTLLPMITGGRQPNEDGT 203 >ref|YP_003607268.1| hypothetical protein BC1002_3735 [Burkholderia sp. CCGE1002] gb|ADG17757.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 216 Score = 240 bits (613), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 133/190 (70%), Positives = 154/190 (81%) Query: 6 VLHPLAVRIAHWLNAFAIACMISSGWGIYNASPIFPFKFASWMTLGGWLGGSIAWHFAAM 65 ++HPL VR+ HW+NAFA+ CM+ SGW IYNASPIFPF+F W T+GGWLGGSIAWHFAAM Sbjct: 9 IVHPLLVRVTHWINAFAMVCMVMSGWAIYNASPIFPFRFPVWATVGGWLGGSIAWHFAAM 68 Query: 66 WLLVANGLFYLLYGALSGHFRRHLLPVRAGEVWRDAGQALRFRLPHQPGVYNAVQKLLYW 125 WLL NGL YL +G SGH RR LLPVRA +V RDA ALRFRLPH+ G YNAVQ+ LY Sbjct: 69 WLLCVNGLLYLAHGVASGHLRRKLLPVRARDVARDAALALRFRLPHETGRYNAVQRALYL 128 Query: 126 AVMLLGILVVLSGLALWKPVQLDWLADLFGGFDFARKVHFAAMAGIAAFVVVHLALVAIV 185 V++LG+L+V SGL++WKPVQ WL LFGGFDFAR+VHF AMAG+ FVVVHL LV +V Sbjct: 129 LVLVLGVLLVASGLSIWKPVQFSWLTTLFGGFDFARRVHFVAMAGVVGFVVVHLLLVLLV 188 Query: 186 PRTLIPMFTG 195 PRTL PMFTG Sbjct: 189 PRTLPPMFTG 198