BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0208.p (251 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774747.1| maleate cis-trans isomerase [Herbaspirillum ... 506 e-141 ref|YP_297988.1| Asp/Glu racemase [Ralstonia eutropha JMP134] >g... 450 e-125 ref|ZP_06687226.1| maleate cis-trans isomerase [Achromobacter pi... 450 e-125 ref|YP_296719.1| Asp/Glu racemase [Ralstonia eutropha JMP134] >g... 447 e-124 ref|YP_004684716.1| maleate cis-trans isomerase [Cupriavidus nec... 446 e-123 ref|YP_725437.1| maleate cis-trans isomerase [Ralstonia eutropha... 445 e-123 ref|YP_002004903.1| maleate cis-trans isomerase [Cupriavidus tai... 444 e-123 ref|YP_004680963.1| maleate cis-trans isomerase [Cupriavidus nec... 442 e-122 ref|YP_728968.1| maleate cis-trans isomerase [Ralstonia eutropha... 441 e-122 ref|YP_555488.1| putative cis-trans isomerase [Burkholderia xeno... 437 e-121 >ref|YP_003774747.1| maleate cis-trans isomerase [Herbaspirillum seropedicae SmR1] gb|ADJ62839.1| maleate cis-trans isomerase protein [Herbaspirillum seropedicae SmR1] Length = 251 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 250/251 (99%), Positives = 251/251 (100%) Query: 1 MQQRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDG 60 MQQRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDG Sbjct: 1 MQQRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDG 60 Query: 61 ESDRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGAL 120 ESDRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGAL Sbjct: 61 ESDRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGAL 120 Query: 121 IDALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLP 180 IDALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLP Sbjct: 121 IDALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLP 180 Query: 181 AIVAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIV 240 AIVAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLEL+RIV Sbjct: 181 AIVAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELDRIV 240 Query: 241 PGAGALLSGAY 251 PGAGALLSGAY Sbjct: 241 PGAGALLSGAY 251 >ref|YP_297988.1| Asp/Glu racemase [Ralstonia eutropha JMP134] gb|AAZ63144.1| Asp/Glu racemase [Ralstonia eutropha JMP134] Length = 250 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 216/249 (86%), Positives = 235/249 (94%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAMLTARQ IRPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLTARQQIRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR+SEQRL AHT NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRKSEQRLKAHTTENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKVIGAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPA+LPAI Sbjct: 122 ALKVIGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPAKLPAI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+ + VDAIVLSACVQMPSLP +A+VEAMTGKPVITAA+ATTYAML+ L+LE +VPG Sbjct: 182 VAQMNIADVDAIVLSACVQMPSLPAVAKVEAMTGKPVITAAIATTYAMLRALDLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >ref|ZP_06687226.1| maleate cis-trans isomerase [Achromobacter piechaudii ATCC 43553] gb|EFF75741.1| maleate cis-trans isomerase [Achromobacter piechaudii ATCC 43553] Length = 250 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 220/249 (88%), Positives = 234/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+ +RIGQIVPSSNTTMETEIPAML ARQ IRPERFTFHSSRMRMKKVVKEELAAMDGES Sbjct: 2 QKPFRIGQIVPSSNTTMETEIPAMLLARQQIRPERFTFHSSRMRMKKVVKEELAAMDGES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SE+RL AHTAANGADAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRVSEKRLQAHTAANGADAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKVIGA++IVVVAPYMKPLTELVVDYIR+EG+EV+DYRALEIPDNLDV RHDP+RLP I Sbjct: 122 ALKVIGARRIVVVAPYMKPLTELVVDYIRNEGFEVVDYRALEIPDNLDVGRHDPSRLPEI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQMDT VDAIVLSACVQMPSLP IA+VEA TGKPVITAAVATTYA+LK L LE +VPG Sbjct: 182 VAQMDTRDVDAIVLSACVQMPSLPAIAKVEAQTGKPVITAAVATTYAILKSLNLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >ref|YP_296719.1| Asp/Glu racemase [Ralstonia eutropha JMP134] gb|AAZ61875.1| Asp/Glu racemase [Ralstonia eutropha JMP134] Length = 250 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 215/249 (86%), Positives = 233/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAMLTARQ IRPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLTARQQIRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SEQRL AHT NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRTSEQRLKAHTTENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKVIGAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPA+LP I Sbjct: 122 ALKVIGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPAKLPGI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+ + VDAIVLSACVQMPSLP +A+VEAMTGKPVITAA+ATTYAML+ L+LE +VPG Sbjct: 182 VAQMNIADVDAIVLSACVQMPSLPAVAKVEAMTGKPVITAAIATTYAMLRALDLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >ref|YP_004684716.1| maleate cis-trans isomerase [Cupriavidus necator N-1] gb|AEI76235.1| maleate cis-trans isomerase [Cupriavidus necator N-1] Length = 255 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 214/249 (85%), Positives = 232/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAML ARQ +RPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 7 QKVFRIGQIVPSSNTTMETEIPAMLAARQLVRPERFTFHSSRMRMKKVVKEELAAMDAES 66 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SEQRL AHTA NG DAPV+TSAGAL+D Sbjct: 67 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRVSEQRLQAHTAENGGDAPVITSAGALVD 126 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKV+GAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPARLP I Sbjct: 127 ALKVMGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPARLPEI 186 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+T+ D IVLSACVQMPSLP +A+VEAMTGKPV+TAAVATTYA+LKRL LE +VPG Sbjct: 187 VAQMNTADADVIVLSACVQMPSLPAVAKVEAMTGKPVVTAAVATTYALLKRLGLEPVVPG 246 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 247 AGALLSGAY 255 >ref|YP_725437.1| maleate cis-trans isomerase [Ralstonia eutropha H16] emb|CAJ92069.1| maleate cis-trans isomerase [Ralstonia eutropha H16] Length = 250 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 214/249 (85%), Positives = 232/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAML ARQ +RPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLAARQLVRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SEQRL AHTA NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRVSEQRLQAHTAENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKV+GAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPARLP I Sbjct: 122 ALKVMGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPARLPEI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+T+ D IVLSACVQMPSLP +A+VEAMTGKPV+TAAVATTYA+LKRL LE +VPG Sbjct: 182 VAQMNTADADVIVLSACVQMPSLPAVAKVEAMTGKPVVTAAVATTYALLKRLGLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >ref|YP_002004903.1| maleate cis-trans isomerase [Cupriavidus taiwanensis LMG 19424] emb|CAQ68834.1| putative MALEATE CIS-TRANS ISOMERASE [Cupriavidus taiwanensis LMG 19424] Length = 250 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 214/249 (85%), Positives = 232/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAML ARQ +RPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLAARQLVRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR SEQRL AHTA NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRVSEQRLQAHTAENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 ALKV+GAK+I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPA+LP I Sbjct: 122 ALKVMGAKRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPAKLPEI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 VAQM+T+ D IVLSACVQMPSLP IA+VEAMTGKPV+TAAVATTYA+LKRL LE +VPG Sbjct: 182 VAQMNTADADVIVLSACVQMPSLPAIAKVEAMTGKPVVTAAVATTYALLKRLGLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >ref|YP_004680963.1| maleate cis-trans isomerase [Cupriavidus necator N-1] gb|AEI79731.1| maleate cis-trans isomerase [Cupriavidus necator N-1] Length = 250 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 212/249 (85%), Positives = 233/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAML ARQ +RPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLLARQQLRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR+SEQRL AHT NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRKSEQRLKAHTIENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 AL+VIGA++I VVAPYMKPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPARLP I Sbjct: 122 ALRVIGARRIAVVAPYMKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPARLPGI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 V+QM+ + VDAIVLSACVQMPSLP +A+VEAMTGKPVITAA+ATTYAMLK L+LE +VPG Sbjct: 182 VSQMNLADVDAIVLSACVQMPSLPAVAKVEAMTGKPVITAAIATTYAMLKALDLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >ref|YP_728968.1| maleate cis-trans isomerase [Ralstonia eutropha H16] emb|CAJ95603.1| maleate cis-trans isomerase [Ralstonia eutropha H16] Length = 250 Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust. Identities = 211/249 (84%), Positives = 232/249 (93%) Query: 3 QRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDGES 62 Q+++RIGQIVPSSNTTMETEIPAML ARQ IRPERFTFHSSRMRMKKVVKEELAAMD ES Sbjct: 2 QKVFRIGQIVPSSNTTMETEIPAMLLARQQIRPERFTFHSSRMRMKKVVKEELAAMDAES 61 Query: 63 DRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGALID 122 DRCAVELSDARVDVLGYACLVAIMAMG GYHR+SEQRL HT NG DAPV+TSAGAL+D Sbjct: 62 DRCAVELSDARVDVLGYACLVAIMAMGHGYHRKSEQRLKVHTIENGGDAPVITSAGALVD 121 Query: 123 ALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLPAI 182 AL+VIGA++I VVAPY+KPLTELVVDYIR+EGYEV+DYRALEIPDNL+V RHDPARLP I Sbjct: 122 ALRVIGARRIAVVAPYLKPLTELVVDYIRNEGYEVVDYRALEIPDNLEVGRHDPARLPGI 181 Query: 183 VAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIVPG 242 V+QM+ + VDAIVLSACVQMPSLP +A+VEAMTGKPVITAA+ATTYAMLK L+LE +VPG Sbjct: 182 VSQMNLADVDAIVLSACVQMPSLPAVAKVEAMTGKPVITAAIATTYAMLKALDLEPVVPG 241 Query: 243 AGALLSGAY 251 AGALLSGAY Sbjct: 242 AGALLSGAY 250 >ref|YP_555488.1| putative cis-trans isomerase [Burkholderia xenovorans LB400] gb|ABE36138.1| Putative cis-trans isomerase [Burkholderia xenovorans LB400] Length = 251 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 216/251 (86%), Positives = 227/251 (90%) Query: 1 MQQRLYRIGQIVPSSNTTMETEIPAMLTARQAIRPERFTFHSSRMRMKKVVKEELAAMDG 60 M + +YRIGQIVPSSNTTMETEIPAML ARQ IRPERFTFHSSRMRMKKV K ELAAMD Sbjct: 1 MSKNIYRIGQIVPSSNTTMETEIPAMLLARQQIRPERFTFHSSRMRMKKVEKSELAAMDA 60 Query: 61 ESDRCAVELSDARVDVLGYACLVAIMAMGRGYHRQSEQRLTAHTAANGADAPVVTSAGAL 120 ESDRCAVELSDARVDVLGYACLVAIMAMG GYHRQSEQRL AHTA NGADAPVVTSAGAL Sbjct: 61 ESDRCAVELSDARVDVLGYACLVAIMAMGHGYHRQSEQRLKAHTAENGADAPVVTSAGAL 120 Query: 121 IDALKVIGAKKIVVVAPYMKPLTELVVDYIRHEGYEVLDYRALEIPDNLDVARHDPARLP 180 +DAL VIGAK++ VVAPYMKPLT+LVVDYI +EGYEV DYRALEI DNL+V RHDP+RLP Sbjct: 121 VDALGVIGAKRVAVVAPYMKPLTKLVVDYIGNEGYEVCDYRALEIQDNLEVGRHDPSRLP 180 Query: 181 AIVAQMDTSQVDAIVLSACVQMPSLPVIAQVEAMTGKPVITAAVATTYAMLKRLELERIV 240 IVA MDT VDAIVLSACVQMPSLPV+AQVEAMT KPV+TAAVATTYAMLK L LERIV Sbjct: 181 EIVAGMDTRGVDAIVLSACVQMPSLPVVAQVEAMTRKPVVTAAVATTYAMLKALGLERIV 240 Query: 241 PGAGALLSGAY 251 PGAG LLSGAY Sbjct: 241 PGAGTLLSGAY 251