BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0185.p (508 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774769.1| two component transmembrane sensor histidine... 1035 0.0 ref|ZP_02369706.1| sensory box histidine kinase, putative [Burkh... 510 e-142 ref|ZP_02383638.1| sensory box histidine kinase, putative [Burkh... 510 e-142 ref|ZP_02367975.1| sensory box histidine kinase, putative [Burkh... 507 e-141 ref|ZP_02360822.1| sensory box histidine kinase, putative [Burkh... 507 e-141 ref|YP_001895785.1| PAS/PAC sensor signal transduction histidine... 495 e-138 ref|ZP_03583798.1| PAS/PAC sensor signal transduction histidine ... 486 e-135 ref|YP_001585044.1| PAS/PAC sensor signal transduction histidine... 486 e-135 ref|YP_837248.1| PAS/PAC sensor signal transduction histidine ki... 483 e-134 ref|ZP_04942344.1| PAS [Burkholderia cenocepacia PC184] >gi|1248... 483 e-134 >ref|YP_003774769.1| two component transmembrane sensor histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ62861.1| two component transmembrane sensor histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 508 Score = 1035 bits (2677), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/508 (99%), Positives = 507/508 (99%) Query: 1 MPEPTAAPEDDPIRFGLDDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELL 60 MPEPTAAPEDDPIRFGLDDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELL Sbjct: 1 MPEPTAAPEDDPIRFGLDDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELL 60 Query: 61 PLKAPDMSRQSHEYRREIGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTER 120 PLKAPDMSRQSHEYRREIGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTER Sbjct: 61 PLKAPDMSRQSHEYRREIGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTER 120 Query: 121 DVIMVQFRNIAREEQIRREMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGV 180 DVIMVQFRNIAREEQIRREMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGV Sbjct: 121 DVIMVQFRNIAREEQIRREMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGV 180 Query: 181 RPGQNPPKNFVAQCLPDSQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIE 240 RPGQNPPKNFV QCLPDSQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIE Sbjct: 181 RPGQNPPKNFVEQCLPDSQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIE 240 Query: 241 IENDLKGHLLHFHDITDQVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIR 300 IENDLKGHLLHFHDITDQVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIR Sbjct: 241 IENDLKGHLLHFHDITDQVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIR 300 Query: 301 NFLEGSVLRLNHSEALREQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDL 360 NFLEGSVLRLNHSEALREQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDL Sbjct: 301 NFLEGSVLRLNHSEALREQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDL 360 Query: 361 NEVLAEVRWFIEMRAAEGRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQ 420 NEVLAEVRWFIEMRAAEGRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFP+ Sbjct: 361 NEVLAEVRWFIEMRAAEGRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPE 420 Query: 421 SQRRVCISLARKDQQALLTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIAR 480 +QRRVCISLARKDQQALLTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIAR Sbjct: 421 NQRRVCISLARKDQQALLTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIAR 480 Query: 481 HRGDIWAQPAQVRGTRFCFTLPLVQRHN 508 HRGDIWAQPAQVRGTRFCFTLPLVQRHN Sbjct: 481 HRGDIWAQPAQVRGTRFCFTLPLVQRHN 508 >ref|ZP_02369706.1| sensory box histidine kinase, putative [Burkholderia thailandensis TXDOH] Length = 488 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 257/486 (52%), Positives = 337/486 (69%), Gaps = 5/486 (1%) Query: 18 DDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELLPLKAPDMSRQSHEYRRE 77 DDFRR++DAL +C++LHDAQTK+I+WAN +AC VLGFTLEELLPLKAPDM+R +Y RE Sbjct: 7 DDFRRLLDALSLCVLLHDAQTKAIVWANRAACDVLGFTLEELLPLKAPDMTRPGPKYPRE 66 Query: 78 IGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTERDVIMVQFRNIAREEQIR 137 +G + + G + EWCYR++ G ++LSEA AT V L ERDV+MVQFR+I+ EE R Sbjct: 67 VGVGAMDRSMTDGPQVYEWCYRSRTGVDMLSEATATYVRLRERDVVMVQFRDISAEEATR 126 Query: 138 REMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGVRPGQNPPKNFVAQCLPD 197 + +++ E+RL+EFMQD DEGVAVL P GG++++S++GR++LG+ G+ P + C Sbjct: 127 QALRRYEARLREFMQDLDEGVAVLTPHGGVQFISESGRRVLGIAAGE-PLGGVLDYCTVA 185 Query: 198 SQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIEIENDLKGHLLHFHDITD 257 ++ L L A S P RYRIAR+DG RW CR ++IE DL G L+HF D+TD Sbjct: 186 DRDRLIAQLRDAPACRPSEPQRYRIARRDGASRWVRITCRRVDIEGDLSGLLIHFRDVTD 245 Query: 258 QVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIRNFLEGSVLRLNHSEALR 317 +V EEARR + LEY R+NAMGEMA AIAHELSQPLAA+RNF+EG++ RL A Sbjct: 246 EVALEEARRAEARMLEYAGRYNAMGEMAAAIAHELSQPLAAVRNFIEGAIRRLGQPGATD 305 Query: 318 EQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDLNEVLAEVRWFIEMRAAE 377 + I+WGL SA RQ +HAA IIKSVREY+V+ E E ++DL ++LA+V +FI++RA E Sbjct: 306 D----IVWGLRSADRQAEHAALIIKSVREYIVRRESVETVVDLRDILADVSYFIDLRAKE 361 Query: 378 GRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQSQRRVCISLARKDQQAL 437 V + + ++ L V CE+VLIGQVILNLAFNAIE ++ + R + + A+ Sbjct: 362 AGVAVTIMQADAPLPVRCERVLIGQVILNLAFNAIEALAGIERPARTLTLRTGGHAAHAV 421 Query: 438 LTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIARHRGDIWAQPAQVRGTRF 497 L D G G+ G +LFDGF SSKV GNGIGL+LCKNI+ RH G I AQPA G Sbjct: 422 LYAVDNGPGVPDGMHAQLFDGFSSSKVGGNGIGLSLCKNIVTRHGGQIRAQPAPGGGLEC 481 Query: 498 CFTLPL 503 FTLPL Sbjct: 482 RFTLPL 487 >ref|ZP_02383638.1| sensory box histidine kinase, putative [Burkholderia thailandensis Bt4] ref|ZP_05589841.1| sensory box histidine kinase, putative [Burkholderia thailandensis E264] Length = 488 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 257/486 (52%), Positives = 337/486 (69%), Gaps = 5/486 (1%) Query: 18 DDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELLPLKAPDMSRQSHEYRRE 77 DDFRR++DAL +C++LHDAQTK+I+WAN +AC VLGFTLEELLPLKAPDM+R +Y RE Sbjct: 7 DDFRRLLDALSLCVLLHDAQTKAIVWANRAACDVLGFTLEELLPLKAPDMTRPGPKYPRE 66 Query: 78 IGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTERDVIMVQFRNIAREEQIR 137 +G + + G + EWCYR++ G ++LSEA AT V L ERDV+MVQFR+I+ EE R Sbjct: 67 VGVGAMDRSMTDGPQVYEWCYRSRTGVDMLSEATATYVRLRERDVVMVQFRDISAEEATR 126 Query: 138 REMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGVRPGQNPPKNFVAQCLPD 197 + +++ E+RL+EFMQD DEGVAVL P GG++++S++GR++LG+ G+ P + C Sbjct: 127 QALRRYEARLREFMQDLDEGVAVLTPHGGVQFISESGRRVLGIAVGE-PLGGVLDYCTVA 185 Query: 198 SQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIEIENDLKGHLLHFHDITD 257 ++ L L A S P RYRIAR+DG RW CR ++IE DL G L+HF D+TD Sbjct: 186 DRDRLIAQLRDAPACRPSEPQRYRIARRDGASRWVRITCRRVDIEGDLSGLLIHFRDVTD 245 Query: 258 QVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIRNFLEGSVLRLNHSEALR 317 +V EEARR + LEY R+NAMGEMA AIAHELSQPLAA+RNF+EG++ RL A Sbjct: 246 EVALEEARRAEARMLEYAGRYNAMGEMAAAIAHELSQPLAAVRNFIEGAIRRLGQPGATD 305 Query: 318 EQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDLNEVLAEVRWFIEMRAAE 377 + I+WGL SA RQ +HAA IIKSVREY+V+ E E ++DL ++LA+V +FI++RA E Sbjct: 306 D----IVWGLRSADRQAEHAALIIKSVREYIVRRESVETVVDLRDILADVSYFIDLRAKE 361 Query: 378 GRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQSQRRVCISLARKDQQAL 437 V + + ++ L V CE+VLIGQVILNLAFNAIE ++ + R + + A+ Sbjct: 362 AGVAVTIMQADAPLPVRCERVLIGQVILNLAFNAIEALAGIERPARTLTLRTGGHAAHAV 421 Query: 438 LTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIARHRGDIWAQPAQVRGTRF 497 L D G G+ G +LFDGF SSKV GNGIGL+LCKNI+ RH G I AQPA G Sbjct: 422 LYAVDNGPGVPDGMHAQLFDGFSSSKVGGNGIGLSLCKNIVTRHGGQIRAQPAAGGGLEC 481 Query: 498 CFTLPL 503 FTLPL Sbjct: 482 RFTLPL 487 >ref|ZP_02367975.1| sensory box histidine kinase, putative [Burkholderia oklahomensis C6786] Length = 488 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 254/486 (52%), Positives = 339/486 (69%), Gaps = 5/486 (1%) Query: 18 DDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELLPLKAPDMSRQSHEYRRE 77 DDFRR++DAL +C++LHDA+TK+I+WAN +AC VLGFT+ ELLPLKAPDM+R +Y+RE Sbjct: 7 DDFRRLLDALSLCVLLHDAKTKAIVWANRAACDVLGFTVAELLPLKAPDMTRPGPKYQRE 66 Query: 78 IGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTERDVIMVQFRNIAREEQIR 137 IG + + G + EWCYR++ G ++LSEA AT V L ERDV+MVQFR+I+ EE R Sbjct: 67 IGVGAMDRSITDGPQVYEWCYRSRTGVDMLSEATATHVRLRERDVVMVQFRDISAEEATR 126 Query: 138 REMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGVRPGQNPPKNFVAQCLPD 197 + +++ E+RL+EFMQD DEGVAVL P GG++++S++GR++LG+ G+ P + + C Sbjct: 127 QALRRYEARLREFMQDLDEGVAVLTPHGGVQFISESGRRVLGIAAGE-PLGDVLDYCTVA 185 Query: 198 SQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIEIENDLKGHLLHFHDITD 257 ++ L L A S P RYRIAR+DG RW CR ++IE DL G L+HF D+TD Sbjct: 186 DRDRLIAQLRDAPACRPSEPQRYRIARRDGTPRWVRITCRRVDIEGDLSGLLIHFRDVTD 245 Query: 258 QVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIRNFLEGSVLRLNHSEALR 317 +V EE RR + LEY R+NAMGEMA IAHELSQPLAA+RNF+EG++ RL + Sbjct: 246 EVAIEETRRIEARMLEYAGRYNAMGEMAAVIAHELSQPLAAVRNFIEGAIQRLGQPGSTD 305 Query: 318 EQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDLNEVLAEVRWFIEMRAAE 377 + ++WGL A RQ +HAA IIKSVREYVV+ E E ++DL ++LA+V +FI++RA E Sbjct: 306 D----VVWGLRGADRQAEHAALIIKSVREYVVRRESVEAVVDLRDILADVSYFIDLRAKE 361 Query: 378 GRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQSQRRVCISLARKDQQAL 437 V + + ++ L V CE+VLIGQVILNLAFNAIE ++ R + + + +A+ Sbjct: 362 AGVAVAIVQADAPLPVRCERVLIGQVILNLAFNAIEALTDVVPPARALMLGIGEHAGRAV 421 Query: 438 LTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIARHRGDIWAQPAQVRGTRF 497 L V D G G+ G RLFDGF SSKVSGNGIGL+LCKNI+ RH G IWAQPA G Sbjct: 422 LHVVDNGPGVPDGVHARLFDGFSSSKVSGNGIGLSLCKNIVTRHGGRIWAQPAPGGGLEC 481 Query: 498 CFTLPL 503 F+LPL Sbjct: 482 RFSLPL 487 >ref|ZP_02360822.1| sensory box histidine kinase, putative [Burkholderia oklahomensis EO147] Length = 488 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 254/486 (52%), Positives = 339/486 (69%), Gaps = 5/486 (1%) Query: 18 DDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELLPLKAPDMSRQSHEYRRE 77 DDFRR++DAL +C++LHDA+TK+I+WAN +AC VLGFT+ ELLPLKAPDM+R +Y+RE Sbjct: 7 DDFRRLLDALSLCVLLHDAKTKAIVWANRAACDVLGFTVAELLPLKAPDMTRPGPKYQRE 66 Query: 78 IGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTERDVIMVQFRNIAREEQIR 137 IG + + G + EWCYR++ G ++LSEA AT V L ERDV+MVQFR+I+ EE R Sbjct: 67 IGVGAMDRSITDGPQVYEWCYRSRTGVDMLSEATATHVRLRERDVVMVQFRDISAEEATR 126 Query: 138 REMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGVRPGQNPPKNFVAQCLPD 197 + +++ E+RL+EFMQD DEGVAVL P GG++++S++GR++LG+ G+ P + + C Sbjct: 127 QALRRYEARLREFMQDLDEGVAVLTPHGGVQFISESGRRVLGIAAGE-PLGDVLDYCTVA 185 Query: 198 SQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIEIENDLKGHLLHFHDITD 257 ++ L L A S P RYRIAR+DG RW CR ++IE DL G L+HF D+TD Sbjct: 186 DRDRLIAQLRDAPACRPSEPQRYRIARRDGTPRWVRITCRRVDIEGDLSGLLIHFRDVTD 245 Query: 258 QVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIRNFLEGSVLRLNHSEALR 317 +V EE RR + LEY R+NAMGEMA IAHELSQPLAA+RNF+EG++ RL + Sbjct: 246 EVAIEETRRIEARMLEYAGRYNAMGEMAAVIAHELSQPLAAVRNFIEGAIQRLGQPGSTD 305 Query: 318 EQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDLNEVLAEVRWFIEMRAAE 377 + ++WGL A RQ +HAA IIKSVREYVV+ E E ++DL ++LA+V +FI++RA E Sbjct: 306 D----VVWGLRGADRQAEHAAHIIKSVREYVVRRESVESVVDLRDILADVSYFIDLRAKE 361 Query: 378 GRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQSQRRVCISLARKDQQAL 437 V + + ++ L V CE+VLIGQVILNLAFNAIE ++ R + + + +A+ Sbjct: 362 AGVAVAIVQADAPLPVRCERVLIGQVILNLAFNAIEALTDVDPPARALMLGVGEHAGRAV 421 Query: 438 LTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIARHRGDIWAQPAQVRGTRF 497 L V D G G+ G RLFDGF SSKVSGNGIGL+LCKNI+ RH G IWAQPA G Sbjct: 422 LRVVDNGPGVPDGVHARLFDGFSSSKVSGNGIGLSLCKNIVTRHGGRIWAQPAPGGGLEC 481 Query: 498 CFTLPL 503 F+LPL Sbjct: 482 RFSLPL 487 >ref|YP_001895785.1| PAS/PAC sensor signal transduction histidine kinase [Burkholderia phytofirmans PsJN] gb|ACD16561.1| PAS/PAC sensor signal transduction histidine kinase [Burkholderia phytofirmans PsJN] Length = 506 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 258/498 (51%), Positives = 339/498 (68%), Gaps = 18/498 (3%) Query: 18 DDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELLPLKAPDMSRQSHEYRRE 77 +DF R++DAL +C++LHDA+TK+I+WAN +AC+ LGFTL ELLPLKA DM+R +YRRE Sbjct: 7 EDFHRLLDALTLCVLLHDAETKAIVWANRAACEALGFTLAELLPLKAKDMTRPVPKYRRE 66 Query: 78 IGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTERDVIMVQFRNIAREEQIR 137 IG + + G + EWCYR++NG ++LSEAIAT VPL ER V+MVQFR+I+ E+ ++ Sbjct: 67 IGVGAMDRSITEGPQVYEWCYRSRNGADMLSEAIATYVPLRERAVVMVQFRDISVEDTLK 126 Query: 138 REMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGVRPGQNPPKNFVAQCLPD 197 + +++ ESRL+EFMQD EGVAVL P G +E++S++GR++LG+ G P + + C Sbjct: 127 QTLRRYESRLREFMQDLGEGVAVLTPTGEVEFVSESGRRVLGLEEG-TPLGDLLDYCSEP 185 Query: 198 SQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIEIENDLKGHLLHFHDITD 257 +E L E L A S P RYRIAR+DG CR IEIENDL G LLHF D+TD Sbjct: 186 DRERLLEQLANAPRIQPSAPQRYRIARRDGTPGSLRITCRRIEIENDLNGRLLHFRDVTD 245 Query: 258 QVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIRNFLEGSVLRLNHSEALR 317 +V E+ARR + LEY R+NAMGEMATAIAHELSQPLAA+RNF+EGS+ RL ++ Sbjct: 246 EVAVEDARRNEARLLEYAGRYNAMGEMATAIAHELSQPLAAVRNFIEGSIRRLAQPASID 305 Query: 318 EQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDLNEVLAEVRWFIEMRAAE 377 + +WGL SA RQ +HAA+IIKSVR+Y+VK E SE DL EVLAEV +FIE+RA E Sbjct: 306 DA----VWGLRSADRQAEHAASIIKSVRDYIVKREASETHADLREVLAEVAYFIELRARE 361 Query: 378 GRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSH-------------FPQSQRR 424 V L ++ + + L V E+VLIGQV+LNLAFNAIE + +R Sbjct: 362 AGVTLTIEQAAQPLPVYVERVLIGQVVLNLAFNAIEALGEGTNERTNEGTNRSVASERRE 421 Query: 425 VCISLARKDQQALLTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIARHRGD 484 + + + + A++ V D G G+ A RLFDGF SSK GNGIGL+LCKNI+ RH G+ Sbjct: 422 LRLVTQLRGKYAIVHVIDNGPGVPADAHGRLFDGFSSSKAGGNGIGLSLCKNIVTRHGGE 481 Query: 485 IWAQPAQVRGTRFCFTLP 502 I A+PAQ G F+LP Sbjct: 482 IRAKPAQHGGLECSFSLP 499 >ref|ZP_03583798.1| PAS/PAC sensor signal transduction histidine kinase [Burkholderia multivorans CGD1] gb|EEE02241.1| PAS/PAC sensor signal transduction histidine kinase [Burkholderia multivorans CGD1] Length = 492 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 251/486 (51%), Positives = 330/486 (67%), Gaps = 5/486 (1%) Query: 18 DDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELLPLKAPDMSRQSHEYRRE 77 DDF R++DAL C++LHDAQTK+I+WAN +AC LGF++EELLPLKAPDM+R +YRRE Sbjct: 7 DDFHRLLDALTTCVLLHDAQTKAIVWANRAACIALGFSVEELLPLKAPDMTRPEPKYRRE 66 Query: 78 IGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTERDVIMVQFRNIAREEQIR 137 IG + A + G + EWCYR++ G ++LSEAIAT VPL RDV+MVQFR+I+ EE IR Sbjct: 67 IGVGAMDRAIVEGPQVYEWCYRSRTGVDMLSEAIATYVPLRGRDVVMVQFRDISAEEAIR 126 Query: 138 REMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGVRPGQNPPKNFVAQCLPD 197 +++++ E+RL+EFMQD DEG+AV+ P GG++++S++GR++LG+ + + C D Sbjct: 127 QQLRRYEARLREFMQDLDEGIAVVTPHGGVQFISESGRRVLGL-AADEAVGDVLDYCSAD 185 Query: 198 SQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIEIENDLKGHLLHFHDITD 257 + L L A S P RYR R+DG W CR +EIE DL G L+HF D++D Sbjct: 186 DRARLVAQLRDAPSTCPSEPQRYRFVRRDGSTCWLRVACRQVEIEGDLDGLLVHFRDVSD 245 Query: 258 QVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIRNFLEGSVLRLNHSEALR 317 +V EEARR + LEY R+NAMGEMAT IAHELSQPLAA+RNF+EG+V RL R Sbjct: 246 EVAIEEARRAEARMLEYAGRYNAMGEMATVIAHELSQPLAAVRNFIEGAVQRLGA----R 301 Query: 318 EQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDLNEVLAEVRWFIEMRAAE 377 IWGL SA RQ +HAA IIKSVRE++VK E L DL ++LA+V +FIE+RA E Sbjct: 302 GNVDDAIWGLRSADRQAEHAALIIKSVREFIVKREPVVVLADLRDILADVAYFIELRARE 361 Query: 378 GRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQSQRRVCISLARKDQQAL 437 V + + ++ L V CE+VLIGQVILNLAFNAIE + ++ RR+ + A+ A Sbjct: 362 SGVTVSIVQADVPLPVRCERVLIGQVILNLAFNAIEAFAGCERATRRLTLGTAQVGALAE 421 Query: 438 LTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIARHRGDIWAQPAQVRGTRF 497 L D G G+ +RLFDGF SSK GNGIGL+LCK+I+ RH G I A+ A+ G Sbjct: 422 LRAIDNGPGVADDAHDRLFDGFSSSKAGGNGIGLSLCKSIVTRHGGRIAARRAEGGGLDC 481 Query: 498 CFTLPL 503 TLPL Sbjct: 482 RVTLPL 487 >ref|YP_001585044.1| PAS/PAC sensor signal transduction histidine kinase [Burkholderia multivorans ATCC 17616] ref|YP_001947843.1| signal transduction histidine kinase [Burkholderia multivorans ATCC 17616] gb|ABX18752.1| PAS/PAC sensor signal transduction histidine kinase [Burkholderia multivorans ATCC 17616] dbj|BAG45307.1| signal transduction histidine kinase [Burkholderia multivorans ATCC 17616] Length = 517 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 254/503 (50%), Positives = 336/503 (66%), Gaps = 11/503 (2%) Query: 1 MPEPTAAPEDDPIRFGLDDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELL 60 +P+PT D+ DDF R++DAL C++LHDAQTK+I+WAN +AC LGF++EELL Sbjct: 21 VPDPTMRFPDE------DDFHRLLDALTTCVLLHDAQTKAIVWANRAACIALGFSVEELL 74 Query: 61 PLKAPDMSRQSHEYRREIGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTER 120 PLKAPDM+R +YRREIG + A + G + EWCYR++ G ++LSEAIAT VPL R Sbjct: 75 PLKAPDMTRPEPKYRREIGVGAMDRAIVEGPQVYEWCYRSRTGVDMLSEAIATYVPLRGR 134 Query: 121 DVIMVQFRNIAREEQIRREMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGV 180 DV+MVQFR+I+ EE IR+++++ E+RL+EFMQD DEG+AV+ P GG++++S++GR++LG+ Sbjct: 135 DVVMVQFRDISAEEAIRQQLRRYEARLREFMQDLDEGIAVVTPHGGVQFISESGRRVLGL 194 Query: 181 RPGQNPPKNFVAQCLPDSQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIE 240 + + C D + L L A S P RYR R+DG W CR +E Sbjct: 195 -AADEAVGDVLDYCSADDRARLVAQLRDAPSTCPSEPQRYRFVRRDGSTCWLRVACRQVE 253 Query: 241 IENDLKGHLLHFHDITDQVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIR 300 IE DL G L+HF D++D+V EEARR + LEY R+NAMGEMAT IAHELSQPLAA+R Sbjct: 254 IEGDLDGLLVHFRDVSDEVAIEEARRAEARMLEYAGRYNAMGEMATVIAHELSQPLAAVR 313 Query: 301 NFLEGSVLRLNHSEALREQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDL 360 NF+EG+V RL R IWGL SA RQ +HAA IIKSVRE++VK E L DL Sbjct: 314 NFIEGAVQRLGA----RGNVDDAIWGLRSADRQAEHAALIIKSVREFIVKREPVVVLADL 369 Query: 361 NEVLAEVRWFIEMRAAEGRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQ 420 ++LA+V +FIE+RA E V + + ++ L V CE+VLIGQVILNLAFNAIE + + Sbjct: 370 RDILADVAYFIELRAREAGVTVSIVQADVPLPVRCERVLIGQVILNLAFNAIEAFAGCER 429 Query: 421 SQRRVCISLARKDQQALLTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIAR 480 + R + + A+ A L D G G+ +RLFDGF SSK GNGIGL+LCK+I+ R Sbjct: 430 ATRMLTLGTAQVGALAELRAIDNGPGVADDAHDRLFDGFSSSKAGGNGIGLSLCKSIVTR 489 Query: 481 HRGDIWAQPAQVRGTRFCFTLPL 503 H G I A+ A+ G TLPL Sbjct: 490 HGGRIAARRAEGGGLDCRVTLPL 512 >ref|YP_837248.1| PAS/PAC sensor signal transduction histidine kinase [Burkholderia cenocepacia HI2424] gb|ABK10355.1| PAS/PAC sensor signal transduction histidine kinase [Burkholderia cenocepacia HI2424] Length = 515 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 248/486 (51%), Positives = 331/486 (68%), Gaps = 5/486 (1%) Query: 18 DDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELLPLKAPDMSRQSHEYRRE 77 DDF R++DAL C++LHDA T++I+WAN +AC LGF++EELLPLKAPDM+R +Y+RE Sbjct: 32 DDFHRLLDALTTCVLLHDAHTRAIVWANRAACIALGFSVEELLPLKAPDMTRPEPKYQRE 91 Query: 78 IGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTERDVIMVQFRNIAREEQIR 137 I A + G + EWCYR++ G ++LSEA AT VPL RDV+MVQFR+I+ EE +R Sbjct: 92 IAVSAWDRARVDGPQVYEWCYRSRTGVDMLSEATATYVPLRGRDVVMVQFRDISAEEAVR 151 Query: 138 REMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGVRPGQNPPKNFVAQCLPD 197 +++++ E+RL+EFMQD DEG+AV+ P GG++++S++GR++LG+ P + P + C Sbjct: 152 QQLRRYEARLREFMQDLDEGIAVVTPRGGVQFISESGRRVLGLAPDE-PLGEVLDYCSAA 210 Query: 198 SQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIEIENDLKGHLLHFHDITD 257 ++ L L A S P RYRI R+DG W +CR +EIE DL G L+ F D++D Sbjct: 211 DRDRLIAQLRDAPSACPSAPQRYRIVRRDGSACWLRILCRQVEIEGDLDGLLVQFRDVSD 270 Query: 258 QVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIRNFLEGSVLRLNHSEALR 317 +V EEARR + LEY R+NAMGEMAT IAHELSQPLAA+RNF+EG+V RLN + A+ Sbjct: 271 EVAIEEARRAEARMLEYAGRYNAMGEMATVIAHELSQPLAAVRNFIEGAVRRLNGNGAVD 330 Query: 318 EQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDLNEVLAEVRWFIEMRAAE 377 + IWGL SA RQ +HAA IIKSVRE++VK E DL ++LA+V +FIE+RA E Sbjct: 331 DA----IWGLRSADRQAEHAALIIKSVREFIVKREPVVARADLRDILADVAYFIELRAKE 386 Query: 378 GRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQSQRRVCISLARKDQQAL 437 V + + ++ L + CE+VLIGQVILNLAFNAIE + + R + + A A Sbjct: 387 AGVTVAIVQADAPLPIRCERVLIGQVILNLAFNAIEAFAGCERLPRTLTLGTANVAGHAE 446 Query: 438 LTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIARHRGDIWAQPAQVRGTRF 497 L D G GI+AG +RLFDGF SSK GNGIGL+LCK+I+ RH G I A PA G Sbjct: 447 LRALDNGPGIEAGAHDRLFDGFSSSKAGGNGIGLSLCKSIVTRHGGRIAATPAAGGGLDC 506 Query: 498 CFTLPL 503 TLPL Sbjct: 507 RVTLPL 512 >ref|ZP_04942344.1| PAS [Burkholderia cenocepacia PC184] gb|EAY65515.1| PAS [Burkholderia cenocepacia PC184] Length = 515 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 248/486 (51%), Positives = 329/486 (67%), Gaps = 5/486 (1%) Query: 18 DDFRRMMDALPMCIILHDAQTKSILWANPSACQVLGFTLEELLPLKAPDMSRQSHEYRRE 77 DDF R++DAL C++LHDA T++I+WAN +AC LGF++EELLPLKAPDM+R +YRRE Sbjct: 32 DDFHRLLDALTTCVLLHDAHTRAIVWANRAACIALGFSVEELLPLKAPDMTRPEPKYRRE 91 Query: 78 IGRKWLHDATLHGSNMVEWCYRAKNGEEILSEAIATLVPLTERDVIMVQFRNIAREEQIR 137 I A G + EWCYR++ G ++LSEA AT VPL RDV+MVQFR+I+ EE +R Sbjct: 92 IAVSAWDRARADGPQVYEWCYRSRTGVDMLSEATATYVPLRGRDVVMVQFRDISAEEAVR 151 Query: 138 REMKKLESRLKEFMQDSDEGVAVLRPDGGIEYLSDAGRKLLGVRPGQNPPKNFVAQCLPD 197 +++++ E+RL+EFMQD DEG+AV+ P GG++++S++GR++LG+ P + P + C Sbjct: 152 QQLRRYEARLREFMQDLDEGIAVVTPHGGVQFISESGRRVLGLAPDE-PLGEVLDYCSAA 210 Query: 198 SQEELQELLTLALPDAISFPLRYRIARKDGLVRWHHAVCRYIEIENDLKGHLLHFHDITD 257 ++ L L A S P RYRI R+DG W +CR +EIE DL G L+ F D++D Sbjct: 211 DRDRLIAQLRDAPSACPSAPQRYRIVRRDGSACWLRILCRQVEIEGDLDGLLVQFRDVSD 270 Query: 258 QVEAEEARRRDQAALEYLARHNAMGEMATAIAHELSQPLAAIRNFLEGSVLRLNHSEALR 317 +V EEARR + LEY R+NAMGEMAT IAHELSQPLAA+RNF+EG+V RLN + A+ Sbjct: 271 EVAIEEARRAEARMLEYAGRYNAMGEMATVIAHELSQPLAAVRNFIEGAVRRLNGNGAVD 330 Query: 318 EQAGQIIWGLESAGRQVDHAAAIIKSVREYVVKLEQSEGLIDLNEVLAEVRWFIEMRAAE 377 + IWGL SA RQ +HAA IIKSVRE++VK E DL ++LA+V +FIE+RA E Sbjct: 331 DA----IWGLRSADRQAEHAALIIKSVREFIVKREPVVARADLRDILADVAYFIELRAKE 386 Query: 378 GRVQLEVQASEEALVVSCEKVLIGQVILNLAFNAIEEMSHFPQSQRRVCISLARKDQQAL 437 V + + ++ L + CE+VLIGQVILNLAFNAIE + + R + + A A Sbjct: 387 AGVTVAIVQADAPLPIRCERVLIGQVILNLAFNAIEAFAGCERVPRTLTLGTANVAGHAE 446 Query: 438 LTVADEGRGIDAGHRERLFDGFFSSKVSGNGIGLALCKNIIARHRGDIWAQPAQVRGTRF 497 L D G GI+AG +RLFDGF SSK GNGIGL+LCK+I+ RH G I A P G Sbjct: 447 LRAIDNGPGIEAGAHDRLFDGFSSSKAGGNGIGLSLCKSIVTRHGGRIAATPVAGGGLDC 506 Query: 498 CFTLPL 503 TLPL Sbjct: 507 RVTLPL 512