BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0176.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774778.1| ribulose-5-phosphate 4-epimerase [Herbaspiri... 536 e-151 ref|YP_004381989.1| hypothetical protein MDS_4206 [Pseudomonas m... 377 e-102 ref|YP_933499.1| hypothetical protein azo1995 [Azoarcus sp. BH72... 371 e-101 ref|YP_004314675.1| class II aldolase/adducin family protein [Ma... 355 4e-96 ref|YP_001340676.1| class II aldolase/adducin family protein [Ma... 351 7e-95 ref|YP_487493.1| class II aldolase/adducin-like [Rhodopseudomona... 310 1e-82 ref|YP_001261452.1| class II aldolase/adducin family protein [Sp... 310 1e-82 ref|ZP_08644025.1| ribulose-5-phosphate 4-epimerase [Acetobacter... 304 7e-81 ref|YP_003188694.1| ribulose-5-phosphate 4-epimerase [Acetobacte... 301 5e-80 ref|YP_001263196.1| class II aldolase/adducin family protein [Sp... 291 5e-77 >ref|YP_003774778.1| ribulose-5-phosphate 4-epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ62870.1| ribulose-5-phosphate 4-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 258 Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust. Identities = 256/258 (99%), Positives = 256/258 (99%) Query: 1 MDIMQYSYGAVQPAHCSDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLV 60 MDIMQYSYGAVQPAHCSDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLV Sbjct: 1 MDIMQYSYGAVQPAHCSDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLV 60 Query: 61 NPFALNYNEVTPANLLKVGLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTP 120 NPFALNYNEVTPANLLKVGLDG LAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTP Sbjct: 61 NPFALNYNEVTPANLLKVGLDGHLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTP 120 Query: 121 ISAVTMKKSGFAHNDFYGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGV 180 ISAVTMKKSGFAHNDFYGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGV Sbjct: 121 ISAVTMKKSGFAHNDFYGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGV 180 Query: 181 AVCESDIERAFFLLWTVQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAV 240 AVCESDIERAFFLLWTVQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAV Sbjct: 181 AVCESDIERAFFLLWTVQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAV 240 Query: 241 IFFAAIVRKMLKSLYQVH 258 IFFAAIVRKMLK LYQVH Sbjct: 241 IFFAAIVRKMLKGLYQVH 258 >ref|YP_004381989.1| hypothetical protein MDS_4206 [Pseudomonas mendocina NK-01] gb|AEB60237.1| hypothetical protein MDS_4206 [Pseudomonas mendocina NK-01] Length = 255 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 172/239 (71%), Positives = 198/239 (82%) Query: 12 QPAHCSDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEVT 71 +PAHCSDEEWALR++LA+CY LVD+ GWTE IFNHIS R+PGP HHYLVNPF LNY+EVT Sbjct: 9 KPAHCSDEEWALRVKLAYCYHLVDWFGWTETIFNHISARLPGPAHHYLVNPFGLNYSEVT 68 Query: 72 PANLLKVGLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSGF 131 P NLLKV L G+ EPS Y NPAGFALHSA+HGARDD++CVIHTHTTPISAV KK GF Sbjct: 69 PGNLLKVDLHGKKLEPSPYDGNPAGFALHSAVHGARDDIQCVIHTHTTPISAVVQKKRGF 128 Query: 132 AHNDFYGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESDIERAF 191 H+DFYGAQL GRIGYH FEGITLF +EK RM++SLG+KH+LVLRNHG+AV ES IE+ F Sbjct: 129 THDDFYGAQLHGRIGYHTFEGITLFDDEKARMIESLGDKHVLVLRNHGIAVGESSIEKTF 188 Query: 192 FLLWTVQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAIVRKM 250 FLLWTVQRAAE Q A ++GGED L+D + KC+DLT LIR GFA F+ A+VRKM Sbjct: 189 FLLWTVQRAAENQCAAGALGGEDNPLEDGIAAKCSDLTAMLIRESGFATKFYDAMVRKM 247 >ref|YP_933499.1| hypothetical protein azo1995 [Azoarcus sp. BH72] emb|CAL94612.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 257 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/244 (72%), Positives = 199/244 (81%) Query: 7 SYGAVQPAHCSDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALN 66 S V+PA+CSDEEWALRIQLA CY LVDY GWTE IFNHIS R+PG +++YLVNPF LN Sbjct: 6 SPAVVKPANCSDEEWALRIQLAECYHLVDYFGWTETIFNHISARLPGGDNYYLVNPFGLN 65 Query: 67 YNEVTPANLLKVGLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTM 126 Y EVTPANLLKV L G EPS Y ANPAGFALHSAIHGAR+D+ CVIHTHT +SAV Sbjct: 66 YTEVTPANLLKVDLQGNKVEPSPYDANPAGFALHSAIHGAREDIHCVIHTHTNAVSAVAN 125 Query: 127 KKSGFAHNDFYGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESD 186 KK+GF+H++FYGAQL+GR+GYH FEGITLFAEEK RML SLG+KHILVLRNHGVAV E D Sbjct: 126 KKAGFSHDNFYGAQLYGRVGYHTFEGITLFAEEKVRMLASLGDKHILVLRNHGVAVGEMD 185 Query: 187 IERAFFLLWTVQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAI 246 I + FFLLWTVQRAAEIQ + GED L ++ QKCADLTQ LIR+ GFAV FF A+ Sbjct: 186 IAKTFFLLWTVQRAAEIQCHAGMIPGEDNPLPAEIGQKCADLTQMLIRDSGFAVKFFDAM 245 Query: 247 VRKM 250 VRKM Sbjct: 246 VRKM 249 >ref|YP_004314675.1| class II aldolase/adducin family protein [Marinomonas mediterranea MMB-1] gb|ADZ92839.1| class II aldolase/adducin family protein [Marinomonas mediterranea MMB-1] Length = 253 Score = 355 bits (910), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 162/240 (67%), Positives = 194/240 (80%) Query: 11 VQPAHCSDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEV 70 +P HCS+EEW LR++LAHCY L+D+ GWTE IFNHIS R+P + YLVNPF LNY E+ Sbjct: 6 TKPDHCSEEEWQLRVKLAHCYHLIDFFGWTETIFNHISARLPHIDGEYLVNPFGLNYTEI 65 Query: 71 TPANLLKVGLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSG 130 TP NL+KV + G + S Y NPAGFALH AIH AR+D+ CVIHTHT +SAV MKK+G Sbjct: 66 TPKNLIKVDVKGNKLDDSPYDGNPAGFALHGAIHAAREDVHCVIHTHTNEVSAVAMKKAG 125 Query: 131 FAHNDFYGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESDIERA 190 F+H+ FYGAQL+GR+GYHDFEGITLF +EKERML+SLG+KHILVLRNHG+AV E DIER Sbjct: 126 FSHDSFYGAQLYGRVGYHDFEGITLFDDEKERMLKSLGDKHILVLRNHGIAVGEFDIERT 185 Query: 191 FFLLWTVQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAIVRKM 250 FFLLWTVQRAAEIQV ++GG D +L +DV+ KCADLTQ LI++ GFA FF A+VRKM Sbjct: 186 FFLLWTVQRAAEIQVTSGALGGADVLLGEDVQTKCADLTQMLIKDSGFADKFFNAMVRKM 245 >ref|YP_001340676.1| class II aldolase/adducin family protein [Marinomonas sp. MWYL1] gb|ABR70741.1| class II aldolase/adducin family protein [Marinomonas sp. MWYL1] Length = 253 Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 160/239 (66%), Positives = 192/239 (80%) Query: 12 QPAHCSDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEVT 71 +P H S EEWALR++LAHCY L+D+ GWTE IFNHIS R+P E YLVNPF LNY E+T Sbjct: 7 RPTHISKEEWALRVKLAHCYHLIDFFGWTETIFNHISARLPHIEGEYLVNPFGLNYTEIT 66 Query: 72 PANLLKVGLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSGF 131 P NL+KV ++G + S Y NPAGFALH AIH AR+D+ CVIHTHT +SAV MKK GF Sbjct: 67 PENLIKVDVNGHKLDDSPYDGNPAGFALHGAIHAAREDIHCVIHTHTNEVSAVAMKKQGF 126 Query: 132 AHNDFYGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESDIERAF 191 +H+ FYGAQL+GR+GYH FEGITLF +EK RML+SLG+KHILVLRNHG+AV E DIER F Sbjct: 127 SHDSFYGAQLYGRVGYHAFEGITLFDDEKSRMLESLGQKHILVLRNHGIAVGEFDIERTF 186 Query: 192 FLLWTVQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAIVRKM 250 FLLWTVQRAAEIQV ++GGED +L+ +R+KCADLTQ LI++ GFA F+ A+VRKM Sbjct: 187 FLLWTVQRAAEIQVTSGALGGEDVLLEQGIREKCADLTQMLIKDSGFADKFYNAMVRKM 245 >ref|YP_487493.1| class II aldolase/adducin-like [Rhodopseudomonas palustris HaA2] gb|ABD08582.1| Class II aldolase/adducin-like [Rhodopseudomonas palustris HaA2] Length = 250 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 145/234 (61%), Positives = 174/234 (74%) Query: 20 EWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEVTPANLLKVG 79 E LR +LA CYRL+D+ GWTEMIFNH+SVR+PG E YLVNPF LNYNEVTP NLL V Sbjct: 12 EAQLRTELALCYRLIDFFGWTEMIFNHVSVRLPGAEKRYLVNPFGLNYNEVTPDNLLTVD 71 Query: 80 LDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSGFAHNDFYGA 139 + G+L S+Y+ NPAGFALH AIH AR+DL CV+H HTTP+SAV K G +H+ FYGA Sbjct: 72 VSGELIGTSNYRPNPAGFALHGAIHSAREDLHCVLHAHTTPMSAVAQKAGGLSHDSFYGA 131 Query: 140 QLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESDIERAFFLLWTVQR 199 QL GR+GYH FEGITL+ +E+ERML SLG+ +L+LRNHGVAV DI RAF LLWTVQR Sbjct: 132 QLTGRVGYHTFEGITLYDDERERMLASLGDGDVLILRNHGVAVGAPDIPRAFMLLWTVQR 191 Query: 200 AAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAIVRKMLKS 253 A EIQ A + G D L D VRQ+C D ++ LI FA +FF VR+M+K+ Sbjct: 192 ACEIQCAAGGIPGPDTPLPDHVRQQCVDNSKDLIAESAFARLFFDGAVRRMIKA 245 >ref|YP_001261452.1| class II aldolase/adducin family protein [Sphingomonas wittichii RW1] gb|ABQ67314.1| class II aldolase/adducin family protein [Sphingomonas wittichii RW1] Length = 250 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 142/232 (61%), Positives = 175/232 (75%) Query: 19 EEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEVTPANLLKV 78 +E LR QL Y LV +LGW+E+IFNHISVR+PGPEHHYL+NPF L Y E+TP NL+KV Sbjct: 10 DEATLRRQLTDFYHLVVHLGWSEIIFNHISVRLPGPEHHYLMNPFGLLYEEITPENLIKV 69 Query: 79 GLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSGFAHNDFYG 138 G+DG+L EPS Y NPAGFALH IH R D+ CV HTH+ +SAV MK+ G +H++FYG Sbjct: 70 GIDGKLVEPSPYPGNPAGFALHGVIHANRPDVACVAHTHSNAVSAVAMKREGISHDNFYG 129 Query: 139 AQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESDIERAFFLLWTVQ 198 AQLFGR+GYHDFEGITL+ +E+ RML+S+G+KH+LVLRNHG+AVCE I F LLWTVQ Sbjct: 130 AQLFGRVGYHDFEGITLYDDERGRMLESIGDKHVLVLRNHGIAVCERSIPATFMLLWTVQ 189 Query: 199 RAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAIVRKM 250 RAAEIQ GG D +L D VRQ+CAD +L + F+ + F A VR+M Sbjct: 190 RAAEIQCMSGQAGGPDTILADSVRQRCADDALRLATSASFSDMVFDASVRRM 241 >ref|ZP_08644025.1| ribulose-5-phosphate 4-epimerase [Acetobacter tropicalis NBRC 101654] dbj|GAA07329.1| ribulose-5-phosphate 4-epimerase [Acetobacter tropicalis NBRC 101654] Length = 252 Score = 304 bits (779), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 142/236 (60%), Positives = 176/236 (74%) Query: 19 EEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEVTPANLLKV 78 EEW LR++LA CY L+ Y GWTEMIFNHIS+R+PG YLVN F LNY+E++P NLL V Sbjct: 8 EEWQLRVRLAECYHLISYFGWTEMIFNHISLRLPGEPRRYLVNAFGLNYDEISPENLLVV 67 Query: 79 GLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSGFAHNDFYG 138 DG L ++ + NPAGFALH AIH ARDD+ C+IHTHT+ +SAV MK++GF++++FYG Sbjct: 68 NADGHLVGDTEGKPNPAGFALHGAIHSARDDIHCIIHTHTSEVSAVAMKQAGFSYDNFYG 127 Query: 139 AQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESDIERAFFLLWTVQ 198 AQLFGR+GYH FEGITL+ EE+ RML+SLG+KH+LVLRNHGVAV ESD+ RAFFLLWTVQ Sbjct: 128 AQLFGRVGYHAFEGITLYEEERPRMLESLGDKHVLVLRNHGVAVGESDVARAFFLLWTVQ 187 Query: 199 RAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAIVRKMLKSL 254 RAAEIQ + G D L D +R CA ++ + A F A VRKM K + Sbjct: 188 RAAEIQCHAGMLPGPDVPLSDTIRASCAKDAAWVLSSTSAADKMFDAAVRKMRKDV 243 >ref|YP_003188694.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-01] dbj|BAI00315.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-01] dbj|BAI03366.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-03] dbj|BAI06411.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-07] dbj|BAI09461.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-22] dbj|BAI12509.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-26] dbj|BAI15555.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-32] dbj|BAI18536.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-01-42C] dbj|BAI21585.1| ribulose-5-phosphate 4-epimerase [Acetobacter pasteurianus IFO 3283-12] Length = 252 Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 145/236 (61%), Positives = 174/236 (73%) Query: 17 SDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEVTPANLL 76 S +E LRIQLA CY L+DY GWTEMIFNHISVR+PG YLVN F LNY+EVTP NLL Sbjct: 6 SADETKLRIQLAECYHLIDYFGWTEMIFNHISVRLPGEPKRYLVNAFGLNYDEVTPENLL 65 Query: 77 KVGLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSGFAHNDF 136 V DG + S + NPAGFALH +IHGARDD+ CVIHTHT + AV MK+ GF+H++F Sbjct: 66 IVDADGHIISNSANKPNPAGFALHGSIHGARDDIHCVIHTHTNAVCAVAMKEQGFSHDNF 125 Query: 137 YGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESDIERAFFLLWT 196 YGAQLF R+GYHDFEGITL+ +E+ RML SLG KH+LVLRNHGVAV +D+ RAFFLLW Sbjct: 126 YGAQLFERVGYHDFEGITLYDDERPRMLASLGNKHVLVLRNHGVAVGGADVPRAFFLLWI 185 Query: 197 VQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAIVRKMLK 252 VQRAAEIQ + G+D L D++R++CA + +I N A F A VRK+ K Sbjct: 186 VQRAAEIQCQTGMIPGKDITLSDEIRRRCAQDAESVIANSQAAQKMFDAAVRKIRK 241 >ref|YP_001263196.1| class II aldolase/adducin family protein [Sphingomonas wittichii RW1] gb|ABQ69058.1| class II aldolase/adducin family protein [Sphingomonas wittichii RW1] Length = 244 Score = 291 bits (746), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 140/237 (59%), Positives = 169/237 (71%) Query: 14 AHCSDEEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEVTPA 73 A +E LR QL Y LVDY GW+E+IFNHIS R+PGP+HHYLVNPF L+Y EV P Sbjct: 2 ASTPSDEARLRQQLTDFYHLVDYFGWSELIFNHISARLPGPDHHYLVNPFGLDYREVRPD 61 Query: 74 NLLKVGLDGQLAEPSDYQANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSGFAH 133 NLL V + G S++ ANPAGFALH IH R D CV HTH+ +SAV MK+ GF H Sbjct: 62 NLLVVDVAGNKLCSSNHDANPAGFALHGVIHQNRPDAMCVAHTHSNALSAVAMKRDGFDH 121 Query: 134 NDFYGAQLFGRIGYHDFEGITLFAEEKERMLQSLGEKHILVLRNHGVAVCESDIERAFFL 193 N+FYGAQLFGR+GYHDFEGITL+ +E+ RML+SLG++H+LVLRNHGVAVCE DI F L Sbjct: 122 NNFYGAQLFGRVGYHDFEGITLYDDERPRMLESLGDRHVLVLRNHGVAVCERDIPTTFML 181 Query: 194 LWTVQRAAEIQVAGRSMGGEDQVLQDDVRQKCADLTQQLIRNDGFAVIFFAAIVRKM 250 LWT QRAAEIQ GG D L D+V+Q+CA +L+ + FA + F A VR+M Sbjct: 182 LWTAQRAAEIQCMAGQAGGPDVPLPDEVKQRCAADALRLVEHAQFAELVFDAQVRRM 238