BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0168.p (123 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775526.1| molybdenum transport regulator protein [Herb... 252 1e-65 ref|YP_002219328.1| putative ModE family transcriptional regulat... 136 1e-30 ref|YP_004784615.1| putative ModE family transcriptional regulat... 134 4e-30 ref|YP_004752220.1| putative transcriptional regulator [Collimon... 134 6e-30 ref|ZP_05293259.1| hypothetical protein ACA_0746 [Acidithiobacil... 124 5e-27 ref|YP_546401.1| ModE family transcriptional regulator [Methylob... 123 1e-26 ref|YP_002945950.1| ModE family transcriptional regulator [Vario... 120 7e-26 ref|ZP_06062887.1| ModE family transcriptional regulator [Acinet... 119 2e-25 ref|YP_004157013.1| ModE family transcriptional regulator [Vario... 117 5e-25 ref|YP_001713768.1| repressor of the modABC operon for molybdenu... 114 4e-24 >ref|YP_003775526.1| molybdenum transport regulator protein [Herbaspirillum seropedicae SmR1] gb|ABS11245.1| ModE2 [Herbaspirillum seropedicae SmR1] gb|ADJ63618.1| molybdenum transport regulator protein [Herbaspirillum seropedicae SmR1] Length = 123 Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 123/123 (100%), Positives = 123/123 (100%) Query: 1 MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60 MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC Sbjct: 1 MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60 Query: 61 FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLMNAPQPDD 120 FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLMNAPQPDD Sbjct: 61 FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLMNAPQPDD 120 Query: 121 GDA 123 GDA Sbjct: 121 GDA 123 >ref|YP_002219328.1| putative ModE family transcriptional regulator [Acidithiobacillus ferrooxidans ATCC 53993] ref|YP_002425211.1| helix-turn-helix domain protein [Acidithiobacillus ferrooxidans ATCC 23270] gb|ACH83121.1| putative transcriptional regulator, ModE family [Acidithiobacillus ferrooxidans ATCC 53993] gb|ACK78950.1| helix-turn-helix domain protein [Acidithiobacillus ferrooxidans ATCC 23270] gb|EGQ63483.1| helix-turn-helix domain protein [Acidithiobacillus sp. GGI-221] Length = 123 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/121 (53%), Positives = 84/121 (69%) Query: 1 MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60 M D R+RV+ E IA GPGKA+LL+ I GSIS AAR M MSYRRAWLLV+ MN C Sbjct: 1 MTDHLQPRLRVLLAEAIAIGPGKAELLRHIREEGSISAAARAMNMSYRRAWLLVDTMNHC 60 Query: 61 FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLMNAPQPDD 120 F +P+V+TATGGS GGGA +T +G+E+LTRY M+ KA ++A D+ LM +P++ Sbjct: 61 FLAPVVSTATGGSHGGGAHLTEMGEEILTRYEAMEAKANLTLAPDIAEFRKLMQLHKPEE 120 Query: 121 G 121 Sbjct: 121 N 121 >ref|YP_004784615.1| putative ModE family transcriptional regulator [Acidithiobacillus ferrivorans SS3] gb|AEM48289.1| putative transcriptional regulator, ModE family [Acidithiobacillus ferrivorans SS3] Length = 123 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 65/120 (54%), Positives = 82/120 (68%) Query: 1 MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60 M D R+R++ E IA GPGKA+LL+ I GSIS AAR M MSYRRAWLLV+ MN C Sbjct: 1 MTDHLQPRLRILLAEAIAVGPGKAELLRHIREKGSISAAARAMSMSYRRAWLLVDTMNHC 60 Query: 61 FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLMNAPQPDD 120 F +PLV TATGGS GGGA +T +G+E+L RY M+ KA A++A D+ LM P++ Sbjct: 61 FLAPLVGTATGGSHGGGAHLTEMGEEILKRYEAMESKANAALAPDIAEFRKLMQLHTPEE 120 >ref|YP_004752220.1| putative transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK61397.1| putative transcriptional regulator, ModE family [Collimonas fungivorans Ter331] Length = 122 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 73/116 (62%), Positives = 92/116 (79%) Query: 1 MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60 M +SK++R+RV+QG+ IAFGPGKA LL AI ++GSIS AAR + MSYRRAWLLVE MN+C Sbjct: 1 MANSKSVRLRVLQGDAIAFGPGKAALLLAIHQSGSISAAARSLGMSYRRAWLLVEAMNQC 60 Query: 61 FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLMNAP 116 F SPLV TATGG++GGGA VT +G E+L RY+ MQ KA A++A D+ + LM AP Sbjct: 61 FKSPLVATATGGAKGGGAQVTPIGHEILARYQAMQNKAEAAVAKDMAYFDALMAAP 116 >ref|ZP_05293259.1| hypothetical protein ACA_0746 [Acidithiobacillus caldus ATCC 51756] ref|YP_004748668.1| hypothetical protein Atc_1319 [Acidithiobacillus caldus SM-1] gb|EET26836.1| hypothetical protein ACA_0746 [Acidithiobacillus caldus ATCC 51756] gb|AEK57968.1| conserved hypothetical protein [Acidithiobacillus caldus SM-1] Length = 133 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/117 (55%), Positives = 79/117 (67%) Query: 2 NDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRCF 61 + S R+R++ E IA GPGKA+LL+AI GSIS AAR M MSYRRAWLLV+ MNR F Sbjct: 7 SHSNAPRLRILLAEAIAMGPGKAELLRAIREHGSISAAARAMGMSYRRAWLLVDTMNRSF 66 Query: 62 ASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLMNAPQP 118 PLV TATGGSRGGGA +T LG +VL RY M++KA A + D+ L+ P Sbjct: 67 IEPLVGTATGGSRGGGARLTPLGMDVLRRYAAMEQKAQAVLQEDMDDFRRLLRPDGP 123 >ref|YP_546401.1| ModE family transcriptional regulator [Methylobacillus flagellatus KT] gb|ABE50560.1| putative transcriptional regulator, ModE family [Methylobacillus flagellatus KT] Length = 115 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 6 TLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRCFASPL 65 ++++R+ +A GPGKADLL+AI ++GSIS AR M MSY+RAW LV+ MN+ F PL Sbjct: 5 SIKIRLPYQHLVAIGPGKADLLEAIDKSGSISAGARAMGMSYKRAWDLVDAMNKSFREPL 64 Query: 66 VTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLMN 114 V TATGGS GGGA VT G +VL RYR M+ KA++ IA D L +L+ Sbjct: 65 VATATGGSHGGGAKVTPFGHDVLARYRAMEAKASSCIAQDAEALASLLQ 113 >ref|YP_002945950.1| ModE family transcriptional regulator [Variovorax paradoxus S110] gb|ACS20684.1| putative transcriptional regulator, ModE family [Variovorax paradoxus S110] Length = 115 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 56/113 (49%), Positives = 80/113 (70%) Query: 1 MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60 M R+R+ + ++IAFGPGK +L+A+ TGSIS AAR++ MSYRRAW+L++EMN Sbjct: 1 MKTRVQFRLRIYRDDSIAFGPGKIAVLEAVAETGSISAAARQLGMSYRRAWMLIDEMNNA 60 Query: 61 FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLM 113 +SP V TA GGSRGGG A+T +G+E++ YR ++ A + AAD+R L L+ Sbjct: 61 LSSPAVNTAAGGSRGGGTALTPVGEEIVKHYRAIENAARLATAADVRALTRLL 113 >ref|ZP_06062887.1| ModE family transcriptional regulator [Acinetobacter johnsonii SH046] gb|EEY96666.1| ModE family transcriptional regulator [Acinetobacter johnsonii SH046] Length = 116 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/110 (52%), Positives = 77/110 (70%), Gaps = 1/110 (0%) Query: 1 MNDSK-TLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNR 59 M D K L++R++ + IAFGPGKA+LL+ I RTGSIS AA+ M MSYRRAW LVE MN Sbjct: 1 MQDVKLKLQLRILLNQDIAFGPGKAELLEEIRRTGSISQAAKSMNMSYRRAWQLVETMNH 60 Query: 60 CFASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHL 109 F S LV T GG+ GGGA +T LG+ +L+++R+M+ KA +I D + Sbjct: 61 SFQSGLVETQKGGTHGGGAKLTDLGESILSQFRQMEIKARVAIEQDFEEI 110 >ref|YP_004157013.1| ModE family transcriptional regulator [Variovorax paradoxus EPS] gb|ADU38902.1| putative transcriptional regulator, ModE family [Variovorax paradoxus EPS] Length = 115 Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 56/113 (49%), Positives = 77/113 (68%) Query: 1 MNDSKTLRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRC 60 M R+RV + + IA GPGK +L+A+ TGSIS AAR + MSYRRAW+LV+EMN+ Sbjct: 1 MKSKVQFRLRVYRDDAIAIGPGKIAVLEAVAETGSISAAARLLGMSYRRAWMLVDEMNKA 60 Query: 61 FASPLVTTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLM 113 SP V TA GGSRGGG A+T +G+E++ YR ++ A + +AD+R L L+ Sbjct: 61 LVSPAVNTAAGGSRGGGTALTPVGEEIVKHYRAIENAAKLATSADIRALTRLL 113 >ref|YP_001713768.1| repressor of the modABC operon for molybdenum transport (ModE) [Acinetobacter baumannii AYE] ref|YP_002319335.1| transcriptional regulator, ModE family [Acinetobacter baumannii AB0057] ref|YP_002325648.1| transcriptional regulator modE [Acinetobacter baumannii AB307-0294] ref|ZP_07225859.1| Transcriptional regulator modE [Acinetobacter baumannii AB056] ref|ZP_07236644.1| Transcriptional regulator modE [Acinetobacter baumannii AB058] ref|ZP_07241032.1| Transcriptional regulator modE [Acinetobacter baumannii AB059] ref|ZP_08433437.1| transcriptional regulator, LysR family [Acinetobacter baumannii 6013150] ref|ZP_08437552.1| transcriptional regulator, LysR family [Acinetobacter baumannii 6013113] emb|CAM86775.1| putative repressor of the modABC operon for molybdenum transport (ModE) [Acinetobacter baumannii AYE] gb|ACJ41352.1| transcriptional regulator, ModE family [Acinetobacter baumannii AB0057] gb|ACJ58844.1| Transcriptional regulator modE [Acinetobacter baumannii AB307-0294] gb|EGJ61318.1| transcriptional regulator, LysR family [Acinetobacter baumannii 6013150] gb|EGJ65201.1| transcriptional regulator, LysR family [Acinetobacter baumannii 6013113] Length = 116 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/107 (57%), Positives = 82/107 (76%) Query: 7 LRVRVMQGETIAFGPGKADLLQAIGRTGSISGAAREMEMSYRRAWLLVEEMNRCFASPLV 66 L++R++ + IAFGPGKADLL+AI RTGSIS AA+ M MSYRRAW LV+ MN+CF + LV Sbjct: 8 LQIRILLEQNIAFGPGKADLLEAIARTGSISQAAKSMNMSYRRAWQLVDTMNQCFETALV 67 Query: 67 TTATGGSRGGGAAVTALGQEVLTRYRRMQKKAAASIAADLRHLHTLM 113 T TGG+ GGGAAVTALGQ+VL YR+M+ A ++A D + + + + Sbjct: 68 ETQTGGTHGGGAAVTALGQKVLQHYRQMEINARQALARDYQIMSSYL 114