BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0130.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775563.1| amino acid ABC transporter permease [Herbasp... 435 e-120 ref|YP_004751935.1| putative amino acid ABC transporter permease... 342 3e-92 ref|YP_004418145.1| amino acid ABC transporter, permease protein... 308 3e-82 ref|ZP_08275609.1| ABC-type amino acid transport system, permeas... 298 5e-79 ref|YP_004848736.1| polar amino acid ABC transporter permease [P... 282 3e-74 ref|ZP_03696906.1| polar amino acid ABC transporter, inner membr... 281 4e-74 ref|NP_903722.1| amino acid ABC transporter permease [Chromobact... 280 9e-74 ref|YP_002795610.1| amino acid ABC transporter, permease protein... 278 6e-73 ref|YP_001345801.1| ABC transporter permease [Pseudomonas aerugi... 269 2e-70 ref|YP_371593.1| amino acid ABC transporter inner membrane prote... 264 7e-69 >ref|YP_003775563.1| amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63655.1| ABC-type amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 221 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSM 60 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSM Sbjct: 3 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSM 62 Query: 61 MRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNA 120 MRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNA Sbjct: 63 MRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNA 122 Query: 121 AFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAV 180 AFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAV Sbjct: 123 AFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAV 182 Query: 181 TFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQI 219 TFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQI Sbjct: 183 TFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQI 221 >ref|YP_004751935.1| putative amino acid ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK61112.1| putative amino acid ABC transporter, permease protein [Collimonas fungivorans Ter331] Length = 220 Score = 342 bits (876), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 174/218 (79%), Positives = 200/218 (91%) Query: 1 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSM 60 ME+L+LLQQAAPTL +GVGYTL+FA+ASMLGGL+LGF LA+ARI+P R WPA++YVS+ Sbjct: 1 MELLDLLQQAAPTLLRGVGYTLVFAVASMLGGLLLGFPLAIARILPSRLARWPASVYVSL 60 Query: 61 MRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNA 120 MRGTPLLVQIFV+YYGLP +GI FSPLTAG+L LSLNA AYLSESLRGAILGV GQW A Sbjct: 61 MRGTPLLVQIFVIYYGLPSIGISFSPLTAGILALSLNAGAYLSESLRGAILGVHTGQWAA 120 Query: 121 AFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAV 180 ++S+GL Y+QTLR+I++PQA+RIAVPSMSNTLISLIKDTSLVSVITVTELMLATKE+IAV Sbjct: 121 SYSIGLNYWQTLRHIVIPQAIRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEIIAV 180 Query: 181 TFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQ 218 TFRPLPLY+AAAAIYW LSLCFE LQ RLE KLG+AH+ Sbjct: 181 TFRPLPLYLAAAAIYWCLSLCFERLQSRLEDKLGQAHK 218 >ref|YP_004418145.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pusillimonas sp. T7-7] gb|AEC21521.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family [Pusillimonas sp. T7-7] Length = 220 Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 147/216 (68%), Positives = 182/216 (84%) Query: 1 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSM 60 M +L+ A P L KG GYTL+FA ++M GGL++GFVLAV RI+P R PA +YVSM Sbjct: 1 MNFFDLMVLAGPILLKGTGYTLIFAFSAMFGGLLVGFVLAVLRIIPSRWTQIPATVYVSM 60 Query: 61 MRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNA 120 MRGTPLLVQ+F++YYGLP +GI F PLTAGVL LSLNA AY+SESLRGAI+G++RGQW+A Sbjct: 61 MRGTPLLVQVFIIYYGLPSIGISFDPLTAGVLALSLNAGAYISESLRGAIVGISRGQWSA 120 Query: 121 AFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAV 180 +S+GL Y+Q L Y+++PQA+R+AVPSMSN+LISLIKDTSLVSVITVTEL+LATK+VIA Sbjct: 121 GYSLGLNYWQNLHYVVMPQALRLAVPSMSNSLISLIKDTSLVSVITVTELLLATKDVIAT 180 Query: 181 TFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKA 216 TF+PLPLY+AAA IYW+LSLC E +Q RLEK G++ Sbjct: 181 TFQPLPLYLAAAGIYWILSLCLEQVQARLEKHYGRS 216 >ref|ZP_08275609.1| ABC-type amino acid transport system, permease component [Oxalobacteraceae bacterium IMCC9480] gb|EGF30920.1| ABC-type amino acid transport system, permease component [Oxalobacteraceae bacterium IMCC9480] Length = 219 Score = 298 bits (762), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 154/218 (70%), Positives = 191/218 (87%) Query: 1 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSM 60 M + ELL AAP + +GV YT+LFALASM+GGL+LG +LA+AR+ PWR + WPAA+YVS+ Sbjct: 1 MNLTELLTLAAPIMLQGVLYTVLFALASMVGGLLLGALLAMARLQPWRVLQWPAAVYVSL 60 Query: 61 MRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNA 120 +RGTPLLVQ+F++YYGLP +GIEFSP++AG+L LSLNA A+LSESLRGA+ GV+ GQW+A Sbjct: 61 IRGTPLLVQVFLIYYGLPSIGIEFSPVSAGILALSLNAGAFLSESLRGAVQGVSAGQWSA 120 Query: 121 AFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAV 180 ++S+GLT+ QTLR+++ PQA+RIAVPSM NTLISLIKDTSLVSVITVTELMLATKEVIA Sbjct: 121 SYSLGLTWVQTLRFVVAPQALRIAVPSMGNTLISLIKDTSLVSVITVTELMLATKEVIAT 180 Query: 181 TFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQ 218 TFRPLPLYV AA +YW LS+ FE +Q RLEK+L +AHQ Sbjct: 181 TFRPLPLYVTAALLYWCLSMLFEVVQRRLEKRLQRAHQ 218 >ref|YP_004848736.1| polar amino acid ABC transporter permease [Pseudogulbenkiania sp. NH8B] dbj|BAK78322.1| polar amino acid ABC transporter, permease protein [Pseudogulbenkiania sp. NH8B] Length = 219 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 142/218 (65%), Positives = 181/218 (83%) Query: 1 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSM 60 ME LEL +QA P L KG GYT+ FAL++M+ GL+LGFV+A+ RI + A+YVS+ Sbjct: 1 MEWLELARQALPVLIKGTGYTVFFALSTMVLGLLLGFVVALVRIARVPLLAPLLALYVSV 60 Query: 61 MRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNA 120 MRGTPLLVQIFV+YYGLP +GIEF P+TAGVL+L+LN +AYLSESLRGAI GV RGQW+A Sbjct: 61 MRGTPLLVQIFVIYYGLPSVGIEFEPVTAGVLSLTLNVAAYLSESLRGAIAGVERGQWDA 120 Query: 121 AFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAV 180 A S+GL ++Q +R+++ PQA+R+AVPS++N+LISLIKDTSLVSVITV+ELM+ATK+VIA Sbjct: 121 AQSLGLNWWQAMRFVVAPQALRLAVPSLANSLISLIKDTSLVSVITVSELMMATKDVIAQ 180 Query: 181 TFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQ 218 TF+PLPLY+ AAAIYW LS FE +Q RLE +L A++ Sbjct: 181 TFQPLPLYLMAAAIYWALSALFEQVQKRLELRLAHAYR 218 >ref|ZP_03696906.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] gb|EEG10426.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella nitroferrum 2002] Length = 219 Score = 281 bits (719), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 144/219 (65%), Positives = 182/219 (83%), Gaps = 2/219 (0%) Query: 1 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPA-AIYVS 59 ME LEL +QA P L KG GYT+ FAL++M+ GL+LGFV+A+ RI P+ P A YVS Sbjct: 1 MEWLELARQALPVLIKGTGYTVFFALSTMVLGLLLGFVVALVRIAR-VPLLAPLLAFYVS 59 Query: 60 MMRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWN 119 +MRGTPLLVQIFV+YYGLP +GIEF P+TAGVL+L+LN +AYLSESLRGAI GV RGQW+ Sbjct: 60 VMRGTPLLVQIFVIYYGLPSVGIEFEPVTAGVLSLTLNVAAYLSESLRGAIAGVERGQWD 119 Query: 120 AAFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIA 179 AA S+GL ++Q +R+++ PQA+R+AVPS++N+LISLIKDTSLVSVITV+ELM+ATK+VIA Sbjct: 120 AAQSLGLNWWQAMRFVVAPQALRLAVPSLANSLISLIKDTSLVSVITVSELMMATKDVIA 179 Query: 180 VTFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQ 218 TF+PLPLY+ AAAIYW LS FE +Q RLE +L A++ Sbjct: 180 QTFQPLPLYLMAAAIYWALSALFEQVQKRLELRLAHAYR 218 >ref|NP_903722.1| amino acid ABC transporter permease [Chromobacterium violaceum ATCC 12472] gb|AAQ61712.1| probable amino acid ABC transporter, permease protein [Chromobacterium violaceum ATCC 12472] Length = 220 Score = 280 bits (716), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 141/217 (64%), Positives = 174/217 (80%) Query: 2 EILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSMM 61 E + L + A P L +G +TLLFAL +M+ GL LGF +A+ R+ + AA YVS M Sbjct: 3 EWMALFEAALPVLLQGAAHTLLFALVAMVLGLALGFAVAMVRVAKLPVLSQLAAFYVSAM 62 Query: 62 RGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNAA 121 RGTPLLVQIFV+YYGLPG+G+E P+ AGVL L+LN +AYLSESLRG I GV +GQW+AA Sbjct: 63 RGTPLLVQIFVIYYGLPGVGLELDPVPAGVLALTLNVAAYLSESLRGGIAGVAKGQWDAA 122 Query: 122 FSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAVT 181 FS+G T++QT+R+II PQA+R++VPS+SN+LISLIKDTSLVSVITVTELMLATKEVIA T Sbjct: 123 FSLGFTWWQTMRHIIAPQALRLSVPSLSNSLISLIKDTSLVSVITVTELMLATKEVIAQT 182 Query: 182 FRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQ 218 F+PLPLY+AAAAIYW+LS FE LQ +E +L AHQ Sbjct: 183 FQPLPLYLAAAAIYWLLSALFERLQRHVENRLNLAHQ 219 >ref|YP_002795610.1| amino acid ABC transporter, permease protein [Laribacter hongkongensis HLHK9] gb|ACO74601.1| probable amino acid ABC transporter, permease protein [Laribacter hongkongensis HLHK9] Length = 219 Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 140/219 (63%), Positives = 180/219 (82%), Gaps = 2/219 (0%) Query: 1 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWP-AAIYVS 59 M EL A P + +G +TLLFA++SM GL+LGF +A+ R+ P+ P AA+YVS Sbjct: 1 MNWTELWALALPVMLQGAWHTLLFAISSMALGLLLGFAIALVRLTR-LPVLAPLAALYVS 59 Query: 60 MMRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWN 119 MRGTPLLVQIFV+YYGLPG+GIEF P+TAG+L L++NA+AYLSES+RGAI GV+ GQW Sbjct: 60 AMRGTPLLVQIFVIYYGLPGIGIEFDPVTAGILALTMNAAAYLSESMRGAIAGVSTGQWQ 119 Query: 120 AAFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIA 179 AA S+G +++Q++R+II PQA+R+AVPS+SNTLISLIKDTSLVSVITV+ELMLATKE+IA Sbjct: 120 AASSLGFSWWQSMRFIIAPQALRLAVPSLSNTLISLIKDTSLVSVITVSELMLATKEIIA 179 Query: 180 VTFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQ 218 T++PLPLY+AAA IYW++SL FE +Q R+E +L AHQ Sbjct: 180 QTYQPLPLYLAAAGIYWLMSLAFEQVQKRVENRLETAHQ 218 >ref|YP_001345801.1| ABC transporter permease [Pseudomonas aeruginosa PA7] gb|ABR83734.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7] Length = 230 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 140/212 (66%), Positives = 170/212 (80%) Query: 2 EILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSMM 61 ++ELL A P L +G YT+LFA SM+ GLVLGF +AV R+ + AA+YVS Sbjct: 13 NLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLVLGFSVAVVRVTKVPLVSQIAAVYVSAF 72 Query: 62 RGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNAA 121 RGTPLLVQIFV+YYGLP +GIEF+P+TAG+L L+LN +AYLSES+RGAILG+ +GQW A Sbjct: 73 RGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAG 132 Query: 122 FSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAVT 181 SVGLT+ QTL II PQA+R+AVPS+SN+LISLIKDTSL+SVITVTELMLATKEVIA T Sbjct: 133 LSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAET 192 Query: 182 FRPLPLYVAAAAIYWMLSLCFEALQHRLEKKL 213 F+PLPLY+AAA IYW+LS FE +Q LE +L Sbjct: 193 FQPLPLYLAAAGIYWLLSALFERVQKALENRL 224 >ref|YP_371593.1| amino acid ABC transporter inner membrane protein [Burkholderia sp. 383] gb|ABB10949.1| amino acid ABC transporter membrane protein, PAAT family [Burkholderia sp. 383] Length = 219 Score = 264 bits (674), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 137/213 (64%), Positives = 166/213 (77%) Query: 1 MEILELLQQAAPTLAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSM 60 ME L+L+ P + KG TL FA+ASM GLV+G V+A+ RI R A YVS+ Sbjct: 1 MEALQLVVHTLPVMVKGAMLTLKFAVASMALGLVVGLVIAIMRIGSNRLAASLAQGYVSL 60 Query: 61 MRGTPLLVQIFVVYYGLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNA 120 MRGTPLLVQ+FVVYYGLP +GI P TAG+ TL+LNA AYLSES+RGAILG+ RGQW A Sbjct: 61 MRGTPLLVQMFVVYYGLPDLGITLDPTTAGIFTLTLNAGAYLSESMRGAILGIGRGQWAA 120 Query: 121 AFSVGLTYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAV 180 A S+GLT+ QTLRY++ PQA+R+AVPS+ NTLISLIKDTSLVSVITVTEL+ +T+EVIA Sbjct: 121 AHSLGLTHVQTLRYVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAA 180 Query: 181 TFRPLPLYVAAAAIYWMLSLCFEALQHRLEKKL 213 TF+PLPLY+AAAAIYW+LS LQ R+E +L Sbjct: 181 TFQPLPLYLAAAAIYWVLSTLLTRLQGRVETRL 213