BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0122.p (606 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775571.1| methyl-accepting chemotaxis transmembrane pr... 1019 0.0 ref|YP_004753015.1| methyl-accepting chemotaxis sensory transduc... 633 e-179 ref|YP_001900597.1| methyl-accepting chemotaxis sensory transduc... 518 e-144 ref|YP_002982575.1| Cache sensor-containing methyl-accepting che... 517 e-144 ref|NP_520920.1| methyl-accepting chemotaxis transmembrane prote... 514 e-143 ref|YP_003751381.1| methyl-accepting chemotaxis transmembrane pr... 513 e-143 emb|CCA85084.1| putative methyl-accepting chemotaxis transmembra... 513 e-143 emb|CCA81520.1| putative methyl-accepting chemotaxis transmembra... 512 e-143 ref|YP_003744609.1| methyl-accepting chemotaxis transmembrane pr... 508 e-141 ref|ZP_06843255.1| methyl-accepting chemotaxis sensory transduce... 507 e-141 >ref|YP_003775571.1| methyl-accepting chemotaxis transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63663.1| methyl-accepting chemotaxis transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 603 Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust. Identities = 592/608 (97%), Positives = 593/608 (97%), Gaps = 7/608 (1%) Query: 1 MKSLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDV 60 MKSLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYV DV Sbjct: 1 MKSLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVADV 60 Query: 61 AAGRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEG 120 AAGRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEG Sbjct: 61 AAGRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEG 120 Query: 121 KAYYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQ 180 KAYYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQ Sbjct: 121 KAYYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQ 180 Query: 181 AQFRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQ 240 AQFRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQ Sbjct: 181 AQFRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQ 240 Query: 241 TRPGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLA 300 TRPGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLA Sbjct: 241 TRPGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLA 300 Query: 301 TTASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIAD 360 TTASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIAD Sbjct: 301 TTASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIAD 360 Query: 361 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIED 420 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIED Sbjct: 361 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIED 420 Query: 421 SVQRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQV 480 SVQRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQV Sbjct: 421 SVQRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQV 480 Query: 481 TQQNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFRVDGEENLSAPVASAL--DAATA 538 TQQNAA AAAAAGSLEEQARRLKAAVSTFRVDGEENLSAPVAS+L ATA Sbjct: 481 TQQNAALVEQ-----AAAAAGSLEEQARRLKAAVSTFRVDGEENLSAPVASSLATATATA 535 Query: 539 TATAVRKAPAAAAIPVASAKPLAGKPLTKPAGGAAPLPAPAKAAPAAAKPASAAKALPAG 598 T TAVRKAPAAAAIPVASAKPLAGKPLTKPAGGAAPLPAPAKAAPAAAKPASAAKALPAG Sbjct: 536 TPTAVRKAPAAAAIPVASAKPLAGKPLTKPAGGAAPLPAPAKAAPAAAKPASAAKALPAG 595 Query: 599 DDGDWETF 606 DDGDWETF Sbjct: 596 DDGDWETF 603 >ref|YP_004753015.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] gb|AEK62192.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] Length = 593 Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust. Identities = 367/604 (60%), Positives = 440/604 (72%), Gaps = 15/604 (2%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 SLKA+L L VMW GLLLLA WSA + R+ M+ ER+ GL+ VVE A G+VK Y DVAA Sbjct: 5 SLKAKLWLVLAVMWLGLLLLAGWSALNTRDTMMKEREAGLKNVVETAAGIVKGYADDVAA 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 R+S +AQ AL+RI++MRY DNY+F+FDSRPVVLM P++K +V KNV +RKD++GK Sbjct: 65 SRLSLADAQSQALQRISSMRYAQDNYVFVFDSRPVVLMHPTSKDIVNKNVGERKDTDGKL 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 YYVEM+K+G+++Q G V YMGRLPGT D+ R K+S V + WDWF+V+GVF++DVQA Sbjct: 125 YYVEMVKLGKQQQQGIVHYMGRLPGTADT-RAEKISQVNYFAPWDWFLVSGVFVNDVQAA 183 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 F +L + L I+ V+G VS ML IIR +T SLGGEP+YA IA RIA G+L + V Sbjct: 184 FYDNLLKQLLIMFVIGATVSATMLLIIRSVTRSLGGEPSYAAAIAARIAGGELDLAVLVD 243 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 D SLL+AM M+ +LA I IR+GT I +EI+AGN DLS+RTE+QA SL T Sbjct: 244 GKDKSSLLHAMRQMQLQLAAAITEIREGTHNIGASIKEISAGNSDLSARTEQQAASLQQT 303 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 A++M+ LTATV+QNADNARQAGQLA SAS IA +GGEVVGQVV TM+GIT SSR+IADII Sbjct: 304 AASMEQLTATVRQNADNARQAGQLAQSASSIAAKGGEVVGQVVHTMQGITDSSRRIADII 363 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSAQAAKEIK LI DSV Sbjct: 364 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAQAAKEIKELIGDSV 423 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 +V GS+ VARAGQTM E+V AV+ +TDI+ E++ ASEEQ +GIEQVN A+ +MDQVT Sbjct: 424 DKVDGGSELVARAGQTMDEIVQAVKRVTDIMAEVTVASEEQSSGIEQVNQAVTQMDQVT- 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFRVDGEENLSAPVASALDAATATATA 542 QQNAALVEQ AAAAGSLE QA RL+ AVS FR+ + SAP A A A + Sbjct: 483 ----QQNAALVEQVAAAAGSLEGQALRLQDAVSVFRMAEQPRSSAPPALAKRAEPLPSA- 537 Query: 543 VRKAPAAAAIPVASAKPLAGKPLTKPAGGAAPLPAPAKAAPAAAKPASAAKALPAGDDGD 602 R APA A P AGK T GA L A KA P + K A A K L A + D Sbjct: 538 -RPAPARRASPPVLKTVAAGKTRT----GAGKL-AAGKAQPTSWK-APAVK-LAASNADD 589 Query: 603 WETF 606 WETF Sbjct: 590 WETF 593 >ref|YP_001900597.1| methyl-accepting chemotaxis sensory transducer [Ralstonia pickettii 12J] gb|ACD28165.1| methyl-accepting chemotaxis sensory transducer [Ralstonia pickettii 12J] Length = 515 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 285/516 (55%), Positives = 363/516 (70%), Gaps = 7/516 (1%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 +LKA+L AL +MW GL+ + WSA R M+DERK GL+ +V+AA G+ K Y + Sbjct: 5 TLKAKLRLALALMWLGLIGVGIWSAMETRATMLDERKAGLQNLVDAAEGIAKLYHGRAQS 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 G +++ +A+K AL +A+MR+ YLF+ DS+ ++LM P+ MVGK+ A KD GK Sbjct: 65 GAMTEADAKKAALSTLASMRFGTTGYLFVVDSQFILLMHPTLADMVGKSTAGFKDPTGKP 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 Y ++ ++K GF +Y GRLPG++ + PK+ YV H WDW + + VFL +V A Sbjct: 125 VYPTIVNAAKDKGFGFAEYQGRLPGSETA--LPKIGYVKHFAPWDWNLSSAVFLQEVDAA 182 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 +R L L ++L+VG VS+ M IIR + LGGEP YA ++A RIA GDL VQVQTR Sbjct: 183 YRHSLVANLIVILLVGGAVSLAMSLIIRNVQRGLGGEPGYATEVARRIAGGDLAVQVQTR 242 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 GD S+L AMA M+++L G I I+ D+I ++IAAGN DLS RTEEQA SL T Sbjct: 243 SGDRDSMLVAMAQMQQQLTGTIGHIKTSADSIASATKQIAAGNADLSQRTEEQASSLEET 302 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 AS+M+ LT+ V+QNADNARQA LA +ASDIA +GGEVVG+V+ TM GI SS+KIADII Sbjct: 303 ASSMEELTSIVRQNADNARQASTLAVNASDIAVKGGEVVGRVIDTMAGINESSKKIADII 362 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRSA AAKEIK LI DSV Sbjct: 363 GVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAGAAKEIKELIGDSV 422 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 RV +G+ VA AG + EVV AV+ +TDI+GEIS+ASEEQ GIEQVN A+ +MD+VTQ Sbjct: 423 GRVENGTTLVAEAGNVIDEVVVAVKRVTDIMGEISSASEEQSAGIEQVNQAVNQMDEVTQ 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFR 518 QNAA A SLEEQA+ L+ AV++FR Sbjct: 483 QNAALVEQAAAAAL-----SLEEQAQVLRDAVASFR 513 >ref|YP_002982575.1| Cache sensor-containing methyl-accepting chemotaxis sensory transducer [Ralstonia pickettii 12D] ref|ZP_07677787.1| methyl-accepting chemotaxis protein [Ralstonia sp. 5_7_47FAA] gb|ACS63903.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Ralstonia pickettii 12D] gb|EFP63854.1| methyl-accepting chemotaxis protein [Ralstonia sp. 5_7_47FAA] Length = 515 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 285/516 (55%), Positives = 363/516 (70%), Gaps = 7/516 (1%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 +LKA+L AL +MW GL+ + WSA R M+DERK GL+ +V+AA G+ K Y + Sbjct: 5 TLKAKLRLALALMWLGLIGVGIWSAMETRATMLDERKAGLQNLVDAAEGIAKLYHGRAQS 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 G +++ +A+K AL +A+MR+ YLF+ DS+ ++LM P+ MVGK+ A KD GK Sbjct: 65 GAMTEADAKKAALSTLASMRFGTTGYLFVVDSQFILLMHPTLADMVGKSTAGFKDPTGKP 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 Y ++ ++K GF +Y GRLPG++ + PK+ YV H WDW + + VFL +V A Sbjct: 125 VYPTIVNAAKDKGFGFAEYQGRLPGSETA--LPKIGYVKHFAPWDWNLSSAVFLQEVDAA 182 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 +R L L ++L+VG VS+ M IIR + LGGEP YA ++A RIA GDL VQVQTR Sbjct: 183 YRHSLVANLIVILLVGGAVSLAMSLIIRNVQRGLGGEPGYATEVARRIAGGDLAVQVQTR 242 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 GD S+L AMA M+++L G I I+ D+I ++IAAGN DLS RTEEQA SL T Sbjct: 243 SGDRDSMLVAMAQMQQQLTGTIGHIKTSADSIASATKQIAAGNADLSQRTEEQASSLEET 302 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 AS+M+ LT+ V+QNADNARQA LA +ASDIA +GGEVVG+V+ TM GI SS+KIADII Sbjct: 303 ASSMEELTSIVRQNADNARQASTLAVNASDIAAKGGEVVGRVIDTMAGINESSKKIADII 362 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRSA AAKEIK LI DSV Sbjct: 363 GVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAGAAKEIKELIGDSV 422 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 RV +G+ VA AG + EVV AV+ +TDI+GEIS+ASEEQ GIEQVN A+ +MD+VTQ Sbjct: 423 GRVENGTTLVAEAGNVIDEVVVAVKRVTDIMGEISSASEEQSAGIEQVNQAVNQMDEVTQ 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFR 518 QNAA A SLEEQA+ L+ AV++FR Sbjct: 483 QNAALVEQAAAAAL-----SLEEQAQVLRDAVASFR 513 >ref|NP_520920.1| methyl-accepting chemotaxis transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD16506.1| putative methyl-accepting chemotaxis transmembrane protein [Ralstonia solanacearum GMI1000] Length = 515 Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust. Identities = 283/516 (54%), Positives = 359/516 (69%), Gaps = 7/516 (1%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 +LKA+L AL +MW GL+ + WSA R M+DERK GL+ +V+AA G+ K Y + Sbjct: 5 TLKAKLRLALALMWLGLIGVGVWSAMETRATMLDERKTGLQNLVDAAEGIAKLYHAKAQS 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 G + ++EA+K AL +A++RY YLF+ DS+ ++ M P+ MVGK+ A KD GK Sbjct: 65 GAMGEDEARKTALATLASLRYGTTGYLFVVDSQLILQMHPTLADMVGKSTAQFKDPTGKP 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 Y ++ ++K +GF +Y GRLPG+D + PK+ YV WDW I + VFL +V+ Sbjct: 125 LYPAIVNAAKDKGYGFAEYQGRLPGSDTA--LPKIGYVKRFAPWDWNISSAVFLQEVETA 182 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 + L L +LVVG V++ M IIR + LGGEPAYA +IA RIA+GDL V+VQTR Sbjct: 183 YVRSLIANLIAILVVGGAVTLAMFLIIRNVQRGLGGEPAYATEIARRIADGDLAVRVQTR 242 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 P D S+L+AMA M+++L G I I+ D+I ++IA GN DLS RTEEQA SL T Sbjct: 243 PDDRNSMLFAMARMQQQLTGTIGHIKTSADSIASATQQIATGNADLSQRTEEQASSLEET 302 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 AS+M+ LT+ VKQNADNARQA LA +ASDIA +GGEVVG+VV TM GI SS+KIADII Sbjct: 303 ASSMEELTSIVKQNADNARQASTLAVNASDIAVKGGEVVGRVVDTMAGINDSSKKIADII 362 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEIK LI DSV Sbjct: 363 GVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKVLISDSV 422 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 RV +G+ VA AG + EVV AV+ +TDI+GEISAAS+EQ +GIEQVN A+ +MD+VTQ Sbjct: 423 GRVENGTTLVAEAGTVIDEVVVAVKRVTDIMGEISAASDEQSSGIEQVNQAVNQMDEVTQ 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFR 518 QNAA A + QA L+ AV++FR Sbjct: 483 QNAALVEEAAAAALSLEE-----QATLLRDAVASFR 513 >ref|YP_003751381.1| methyl-accepting chemotaxis transmembrane protein [Ralstonia solanacearum PSI07] emb|CBJ50072.1| putative methyl-accepting chemotaxis transmembrane protein [Ralstonia solanacearum PSI07] Length = 515 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 284/516 (55%), Positives = 359/516 (69%), Gaps = 7/516 (1%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 +LKA+L AL +MW GL+ + WSA R M+DERK GL+ +V+AA G+ K Y + Sbjct: 5 TLKAKLRLALALMWLGLVGVGIWSAMETRATMLDERKTGLQNLVDAAEGIAKLYHAKAQS 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 G + ++EA+K AL +A+MRY YLF+ DS+ ++ M P+ MVGK+ A KD GK Sbjct: 65 GAMGEDEARKTALATLASMRYGTTGYLFVVDSQLILQMHPTLADMVGKSTAQFKDPTGKP 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 Y ++ ++K +GF +Y GRLPG+D + PK+ YV WDW I + VFL +V+A Sbjct: 125 LYPAIVNAAKDKGYGFAEYQGRLPGSDTA--LPKIGYVKRFAPWDWNISSAVFLQEVEAA 182 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 + L L +LVVG VV++ M IIR + LGGEPAYA +IA RIA GDL V VQT Sbjct: 183 YVHSLIANLIAILVVGGVVTLAMSLIIRNVQRGLGGEPAYATEIARRIAGGDLAVHVQTH 242 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 GD S+L+AMA M+++L G I I+ D+I ++IAAGN DLS RTEEQA SL T Sbjct: 243 AGDHDSMLFAMAQMQQQLTGTIGNIKTSADSIASATQQIAAGNADLSQRTEEQASSLEET 302 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 AS+M+ LT+ VKQNADNARQA LA +ASDIA +GGEVVG+VV+TM GI SS+KIADII Sbjct: 303 ASSMEELTSIVKQNADNARQASTLAGNASDIAVKGGEVVGRVVETMAGINDSSKKIADII 362 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEIK LI DSV Sbjct: 363 GVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKELISDSV 422 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 RV +G+ VA AG + EVV AV+ +T I+GEISAAS+EQ +GIEQVN A+ +MD+VTQ Sbjct: 423 GRVENGTTLVAEAGTVIDEVVVAVKRVTGIMGEISAASDEQSSGIEQVNQAVNQMDEVTQ 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFR 518 QNAA A + Q + L+ AV++FR Sbjct: 483 QNAALVEEAAAAALSLEE-----QGQLLRDAVASFR 513 >emb|CCA85084.1| putative methyl-accepting chemotaxis transmembrane protein [Ralstonia syzygii R24] Length = 515 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 283/516 (54%), Positives = 358/516 (69%), Gaps = 7/516 (1%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 +LKA+L AL +MW GL+ + WSA R M+DERK GL+ +V+AA G+ K Y + Sbjct: 5 TLKAKLRLALALMWLGLVGVGIWSAMETRATMLDERKTGLQNLVDAAEGIAKLYHAKAQS 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 G + ++EA+K AL +A+MRY YLF+ DS+ ++ M P+ MVGK+ A KD GK Sbjct: 65 GAMGEDEARKTALATLASMRYGTTGYLFVVDSQLILQMHPTLADMVGKSTAQFKDPTGKP 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 Y ++ ++K +GF +Y GRLPG+D + PK+ YV WDW I + VFL +V+ Sbjct: 125 LYPAIVNAAKDKGYGFAEYQGRLPGSDTT--LPKIGYVKRFAPWDWNISSAVFLQEVEVA 182 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 + L L +LVVG VV++ M IIR + LGGEPAYA +IA RIA GDL V VQT Sbjct: 183 YVHSLIANLIAILVVGGVVTLAMSLIIRNVQHGLGGEPAYATEIARRIAGGDLAVHVQTH 242 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 GD S+L+AMA M+++L G I I+ D+I ++IAAGN DLS RTE+QA SL T Sbjct: 243 AGDHDSMLFAMAQMQQQLTGTIGNIKTSADSIASATQQIAAGNADLSQRTEQQASSLEET 302 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 AS+M+ LT+ VKQNADNARQA LA +ASDIA +GGEVV +VV+TM GI SS+KIADII Sbjct: 303 ASSMEELTSIVKQNADNARQASTLAVNASDIAVKGGEVVSRVVETMAGINDSSKKIADII 362 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEIKALI DSV Sbjct: 363 GVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKALISDSV 422 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 RV +G+ VA AG + EVV AV+ +TDI+GEISAAS EQ +GIEQVN A+ +MD+VTQ Sbjct: 423 GRVENGTTLVAEAGTVIDEVVVAVKRVTDIMGEISAASAEQSSGIEQVNQAVNQMDEVTQ 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFR 518 QNAA A + Q + L+ AV++FR Sbjct: 483 QNAALVEEAAAAALSLEE-----QGQLLRDAVASFR 513 >emb|CCA81520.1| putative methyl-accepting chemotaxis transmembrane protein [blood disease bacterium R229] Length = 515 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 283/516 (54%), Positives = 359/516 (69%), Gaps = 7/516 (1%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 +LKA+L AL +MW GL+ + WSA R M+DERK GL+ +V+AA G+ K Y + Sbjct: 5 TLKAKLRLALALMWLGLVGVGIWSAMETRATMLDERKTGLQNLVDAAEGIAKLYHAKAQS 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 G + ++EA+K AL +A+MRY YLF+ DS+ ++ M P+ MVGK+ A KD GK Sbjct: 65 GAMGEDEARKTALATLASMRYGTTGYLFVVDSQLILQMHPTLADMVGKSTAQFKDPTGKP 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 Y ++ ++K +GF +Y GRLPG+D + PK+ YV WDW I + VFL +V+A Sbjct: 125 LYPAIVNAAKDKGYGFAEYQGRLPGSDTA--LPKIGYVKRFAPWDWNISSAVFLQEVEAA 182 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 + L L +LVVG VV++ M IIR + LGGEPAYA +IA RIA GDL V VQT Sbjct: 183 YVHSLIANLIAILVVGGVVTLAMSLIIRNVQRGLGGEPAYATEIARRIAGGDLAVHVQTH 242 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 GD S+L+AMA M+++L G I I+ D+I ++IAAGN DLS RTEEQA SL T Sbjct: 243 AGDHDSMLFAMAQMQQQLTGTIGNIKTSADSIASATQQIAAGNADLSQRTEEQASSLEET 302 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 A++M+ LT+ VKQNADNARQA LA +ASDIA +GGEVVG+VV+TM GI SS+KIADII Sbjct: 303 AASMEELTSIVKQNADNARQASTLAVNASDIAVKGGEVVGRVVETMAGINDSSKKIADII 362 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEIK LI DSV Sbjct: 363 GVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKELISDSV 422 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 RV +G+ VA AG + EVV AV+ +T I+GEISAAS+EQ +GIEQVN A+ +MD+VTQ Sbjct: 423 GRVENGTTLVAEAGTVIDEVVVAVKRVTGIMGEISAASDEQSSGIEQVNQAVNQMDEVTQ 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFR 518 QNAA A + Q + L+ AV++FR Sbjct: 483 QNAALVEEAAAAALSLEE-----QGQLLRDAVASFR 513 >ref|YP_003744609.1| methyl-accepting chemotaxis transmembrane protein [Ralstonia solanacearum CFBP2957] emb|CBJ41965.1| putative methyl-accepting chemotaxis transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 515 Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust. Identities = 283/516 (54%), Positives = 357/516 (69%), Gaps = 7/516 (1%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 +LKA+L AL +MW GL+ + WSA R M+DERK GL+ +V+AA GV K Y V + Sbjct: 5 TLKAKLRLALALMWLGLVGVGVWSAMETRATMLDERKTGLQNLVDAAEGVAKLYHAKVQS 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 G + ++EA+K AL +A+MRY YLF+ DS+ ++ M P+ MVGK+ A KD GK Sbjct: 65 GAMGEDEAKKTALATLASMRYGTTGYLFVVDSQLILQMHPTLADMVGKSTAQFKDPTGKP 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 Y ++ ++K +GF +Y GR PG+D + PK+ YV WDW I + VFL +V A Sbjct: 125 VYPTIVNAAKDKGYGFAEYQGRQPGSDAA--LPKIGYVKRFAPWDWNISSAVFLQEVDAA 182 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 + L L ++LVVG VV++ M IIR + LGGEPAYA +IA RIA GDL VQV+TR Sbjct: 183 YVHSLTANLIVILVVGSVVTLAMSLIIRNVQRGLGGEPAYATEIARRIAGGDLAVQVRTR 242 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 D S+L+AMA M++ L G I I+ D+I ++IA GN DLS RTEEQA SL T Sbjct: 243 QDDRGSMLFAMAQMQQHLTGTIGNIKTSADSIASATKQIATGNADLSQRTEEQASSLEET 302 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 AS+M+ LT+ VKQNADNARQA LA +AS IA +GGEVVG+VV+TM GI SS+KIADII Sbjct: 303 ASSMEELTSIVKQNADNARQASTLAVNASGIAVKGGEVVGRVVETMAGINDSSKKIADII 362 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEIK LI DSV Sbjct: 363 GVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKVLISDSV 422 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 RV +G+ VA AG + EVV AV+ +TDI+ EISAAS+EQ +GIEQVN A+ +MD+VTQ Sbjct: 423 GRVENGTTLVAEAGTVIDEVVVAVKRVTDIMSEISAASDEQSSGIEQVNQAVNQMDEVTQ 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFR 518 QNAA A + QA+ L+ AV++F Sbjct: 483 QNAALVEEAAAAALSLEE-----QAQLLRDAVASFH 513 >ref|ZP_06843255.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Burkholderia sp. Ch1-1] gb|EFG69220.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Burkholderia sp. Ch1-1] Length = 627 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 281/524 (53%), Positives = 358/524 (68%), Gaps = 7/524 (1%) Query: 3 SLKAQLLSALVVMWAGLLLLAAWSAFSARENMIDERKDGLRRVVEAANGVVKSYVVDVAA 62 SL +L +L ++W GLL + WSA R M+ ERK G+ +V+AA G+V Y + Sbjct: 5 SLNRKLWLSLALVWLGLLGVGLWSAVETRSTMLAERKAGMVNLVDAAQGIVSGYYALSQS 64 Query: 63 GRVSKEEAQKNALERIAAMRYDGDNYLFIFDSRPVVLMLPSNKAMVGKNVADRKDSEGKA 122 GR+S+ + Q+ AL R+AAMRY YLF+ DS+PVVLM P+ M GK V D KD +GK Sbjct: 65 GRMSEADVQREALARLAAMRYGESGYLFVMDSKPVVLMHPTLPQMTGKAVGDFKDPDGKL 124 Query: 123 YYVEMMKVGQEKQHGFVQYMGRLPGTDDSNRTPKMSYVVHNQDWDWFIVTGVFLSDVQAQ 182 YV ++ + GF QY GRLP ++ + PK+SYVVH WDW I +GVF+ D+ Sbjct: 125 LYVAIVDAAKASGRGFAQYRGRLPHSETA--VPKLSYVVHFAPWDWNITSGVFIKDIDTV 182 Query: 183 FRADLFRLLGILLVVGVVVSVMMLAIIRRITGSLGGEPAYAVDIATRIANGDLTVQVQTR 242 + L L ++LV+G ++S+ ML IIR + SLGGEP A +A IA GDLT V R Sbjct: 183 YYETLLGHLAVVLVIGAIISLAMLLIIRNVRASLGGEPGQAARLAASIAQGDLTQVVDVR 242 Query: 243 PGDTRSLLYAMATMRERLAGVIKGIRQGTDAIDIGAREIAAGNLDLSSRTEEQAGSLATT 302 P D S++ AM M+ RL I IR+ ++I ++IAAGN DLS RTE+QA SL T Sbjct: 243 PHDKTSMMAAMNDMQNRLQRTIGEIRRSAESIASATQQIAAGNSDLSQRTEQQAASLQET 302 Query: 303 ASNMDGLTATVKQNADNARQAGQLAHSASDIATRGGEVVGQVVQTMEGITGSSRKIADII 362 A++M+ LTATVKQNADNARQA LAH+AS+IATRG +VV +V+ TM I SSR+IA+II Sbjct: 303 AASMEELTATVKQNADNARQASGLAHNASEIATRGNDVVSRVIGTMGEINDSSRQIAEII 362 Query: 363 GVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAQAAKEIKALIEDSV 422 GVI+GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRS AAKEIK LI SV Sbjct: 363 GVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSGTAAKEIKQLISASV 422 Query: 423 QRVGSGSDQVARAGQTMGEVVAAVRSLTDIVGEISAASEEQRNGIEQVNLAIGEMDQVTQ 482 +RV +GS V +AG TMGE++ AV+ +TDI+GEI+AASEEQ +GI QV A+ +MD+VTQ Sbjct: 423 ERVHNGSTLVQQAGTTMGEILQAVQRVTDIMGEIAAASEEQSSGISQVGRAVTQMDEVTQ 482 Query: 483 QNAAQQNAALVEQAAAAAGSLEEQARRLKAAVSTFRVDGEENLS 526 QNAA A A+ QA RL+ AV+ FRV+G E+ S Sbjct: 483 QNAALVEQAAAAAASLQD-----QAGRLREAVNAFRVNGAEDAS 521