BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0105.p (186 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775588.1| ribosome recycling factor [Herbaspirillum se... 371 e-101 ref|YP_004751989.1| ribosome recycling factor [Collimonas fungiv... 322 2e-86 ref|YP_001353745.1| ribosome recycling factor [Janthinobacterium... 320 7e-86 ref|YP_001099638.1| ribosome recycling factor [Herminiimonas ars... 316 8e-85 ref|ZP_08275644.1| Ribosome recycling factor [Oxalobacteraceae b... 306 1e-81 ref|ZP_04578268.1| ribosome recycling factor [Oxalobacter formig... 301 2e-80 ref|YP_001898857.1| ribosome recycling factor [Ralstonia pickett... 301 4e-80 ref|ZP_04576078.1| ribosome recycling factor [Oxalobacter formig... 300 5e-80 ref|ZP_07676864.1| ribosome recycling factor [Ralstonia sp. 5_7_... 300 8e-80 ref|YP_002981306.1| ribosome recycling factor [Ralstonia pickett... 298 2e-79 >ref|YP_003775588.1| ribosome recycling factor [Herbaspirillum seropedicae SmR1] gb|ADJ63680.1| ribosome recycling factor (ribosome releasing factor) protein [Herbaspirillum seropedicae SmR1] Length = 186 Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust. Identities = 186/186 (100%), Positives = 186/186 (100%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL Sbjct: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG Sbjct: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE Sbjct: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 Query: 181 KEVMTV 186 KEVMTV Sbjct: 181 KEVMTV 186 >ref|YP_004751989.1| ribosome recycling factor [Collimonas fungivorans Ter331] gb|AEK61166.1| Ribosome recycling factor [Collimonas fungivorans Ter331] Length = 186 Score = 322 bits (824), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 155/186 (83%), Positives = 174/186 (93%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 MS+ADVKKN++Q+M KS+ETL+A+LAKVRTGRAHTG+LD +MV+YYGSPT LSQVAN+TL Sbjct: 1 MSIADVKKNTDQRMQKSLETLRADLAKVRTGRAHTGILDHIMVEYYGSPTNLSQVANVTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 IDARTIGVQP+EKKMVAVVEKAIRE+DLGLNPAT GE+IRVP PPLTEERRKEMVKLVKG Sbjct: 61 IDARTIGVQPFEKKMVAVVEKAIRESDLGLNPATQGEMIRVPTPPLTEERRKEMVKLVKG 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 EAEDAKIA+RNIRR+ NE LKKLVKDK SEDDERR QD+IQKLTDKFVAEIDK V DKE Sbjct: 121 EAEDAKIAIRNIRRDANEGLKKLVKDKECSEDDERRAQDDIQKLTDKFVAEIDKQVIDKE 180 Query: 181 KEVMTV 186 KE++TV Sbjct: 181 KEILTV 186 >ref|YP_001353745.1| ribosome recycling factor [Janthinobacterium sp. Marseille] sp|A6SZP8.1|RRF_JANMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor gb|ABR89027.1| ribosome recycling factor [Janthinobacterium sp. Marseille] Length = 186 Score = 320 bits (820), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 158/186 (84%), Positives = 172/186 (92%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 M+VAD KK ++QKM KSIETLKA+LAKVRTGRAHTG+LD VMV+YYG+PT LSQVAN+TL Sbjct: 1 MTVADAKKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLSQVANVTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 IDARTIGVQP+EKKMVAVVEKAIREADLGLNPAT GELIRVP PPLTEERRKEMVKLVK Sbjct: 61 IDARTIGVQPFEKKMVAVVEKAIREADLGLNPATQGELIRVPTPPLTEERRKEMVKLVKS 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 EAEDAKIAVRNIRR+ NESLKKLVK+K SED+ERR QDEIQKLTDKFV EIDKLV +KE Sbjct: 121 EAEDAKIAVRNIRRDANESLKKLVKEKACSEDEERRAQDEIQKLTDKFVIEIDKLVVEKE 180 Query: 181 KEVMTV 186 KEV+TV Sbjct: 181 KEVLTV 186 >ref|YP_001099638.1| ribosome recycling factor [Herminiimonas arsenicoxydans] sp|A4G4S4.1|RRF_HERAR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor emb|CAL61511.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF) [Herminiimonas arsenicoxydans] Length = 186 Score = 316 bits (810), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 153/186 (82%), Positives = 172/186 (92%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 M+VAD KK ++QKM KSIETLKA+LAKVRTGRAHTG+LD VMV+YYG+PT L+QVAN+TL Sbjct: 1 MTVADAKKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLTQVANVTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 IDARTIGVQP+EKKMVAVVEKAIR+ADLGLNPAT GE+IRVP PPLTEERRKEMVKLVK Sbjct: 61 IDARTIGVQPFEKKMVAVVEKAIRDADLGLNPATQGEMIRVPTPPLTEERRKEMVKLVKS 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 EAEDAKIA+RNIRR+ NE+LKKL+KDK SEDDERR QDEIQKLTDKFV E+DKLV +KE Sbjct: 121 EAEDAKIAIRNIRRDANETLKKLLKDKACSEDDERRAQDEIQKLTDKFVLEVDKLVVEKE 180 Query: 181 KEVMTV 186 KEV+TV Sbjct: 181 KEVLTV 186 >ref|ZP_08275644.1| Ribosome recycling factor [Oxalobacteraceae bacterium IMCC9480] gb|EGF30890.1| Ribosome recycling factor [Oxalobacteraceae bacterium IMCC9480] Length = 186 Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 146/186 (78%), Positives = 169/186 (90%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 M++ DVKKN++ +M KSIETLK +LAKVRTGRAH G+LD +MVDYYG+PT L+QVAN+TL Sbjct: 1 MTIVDVKKNTDVRMHKSIETLKTDLAKVRTGRAHVGMLDHIMVDYYGNPTQLTQVANVTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 +DART+GVQP+EKKMV+VVEKAIR+ADLGLNP+T G+LIRVP P LTEERRKEMVKLVK Sbjct: 61 VDARTLGVQPWEKKMVSVVEKAIRDADLGLNPSTQGDLIRVPTPALTEERRKEMVKLVKS 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 EAEDAKIA+RNIRR+ NE LKKL+KDK SEDDERR QDEIQK+TDKFVAEIDKLV DKE Sbjct: 121 EAEDAKIAIRNIRRDANEGLKKLIKDKECSEDDERRAQDEIQKMTDKFVAEIDKLVVDKE 180 Query: 181 KEVMTV 186 KEV+TV Sbjct: 181 KEVLTV 186 >ref|ZP_04578268.1| ribosome recycling factor [Oxalobacter formigenes OXCC13] gb|EEO29241.1| ribosome recycling factor [Oxalobacter formigenes OXCC13] Length = 186 Score = 301 bits (772), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 145/186 (77%), Positives = 169/186 (90%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 MS+ADVKK++EQKM KSIE+LKA+LAKVRTGRAHTG+LD V VDYYGSPT +SQVAN+TL Sbjct: 1 MSIADVKKSAEQKMNKSIESLKADLAKVRTGRAHTGILDHVEVDYYGSPTKISQVANITL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 +DARTI VQP+EKKMV +EKAIR++DLGLNP+T GE+IRVP P LTEERRKEMVKLVK Sbjct: 61 LDARTISVQPWEKKMVNAIEKAIRDSDLGLNPSTMGEIIRVPTPALTEERRKEMVKLVKT 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 E EDAK+AVRNIRR+ NE++KK+VKDK SEDDERR QD+IQKLTDKFV +IDKL++DKE Sbjct: 121 EGEDAKVAVRNIRRDANEAVKKMVKDKECSEDDERRSQDDIQKLTDKFVQQIDKLLADKE 180 Query: 181 KEVMTV 186 KEVMTV Sbjct: 181 KEVMTV 186 >ref|YP_001898857.1| ribosome recycling factor [Ralstonia pickettii 12J] sp|B2UB09.1|RRF_RALPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor gb|ACD26425.1| ribosome recycling factor [Ralstonia pickettii 12J] Length = 186 Score = 301 bits (770), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 147/186 (79%), Positives = 166/186 (89%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 MSVADVKKN+EQKM KSIE LK +LAK+RTGRAHTGLLD V VDYYGS +SQVAN+TL Sbjct: 1 MSVADVKKNAEQKMQKSIEALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 +DARTIGVQP+EKKMV VEKAIREADLGLNPAT G++IRVP P LTEERRKE+ K+VKG Sbjct: 61 VDARTIGVQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKG 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 E EDAK+AVRN+RR+ NE LKKLVKDK SEDDERRG DE+QKLTDKFVAEIDKLV++K+ Sbjct: 121 EGEDAKVAVRNLRRDANEQLKKLVKDKAISEDDERRGGDEVQKLTDKFVAEIDKLVAEKD 180 Query: 181 KEVMTV 186 KE+MTV Sbjct: 181 KEIMTV 186 >ref|ZP_04576078.1| ribosome recycling factor [Oxalobacter formigenes HOxBLS] gb|EEO27040.1| ribosome recycling factor [Oxalobacter formigenes HOxBLS] Length = 186 Score = 300 bits (769), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 140/186 (75%), Positives = 172/186 (92%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 MS+A+VKKN+EQKM KS+++LKA+LAKVRTGRAHTG+LD + VDYYGSPT +SQVAN+TL Sbjct: 1 MSIAEVKKNAEQKMNKSVDSLKADLAKVRTGRAHTGILDHIQVDYYGSPTQISQVANVTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 +DARTI VQP+EKKMV+V+EKAIR++DLGLNP++ G++IRVP PPLTEERRKEMVKLVK Sbjct: 61 LDARTISVQPWEKKMVSVIEKAIRDSDLGLNPSSVGDIIRVPTPPLTEERRKEMVKLVKT 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 E EDAK+AVRNIRR+ NE+LKK+VKDK SED+ERR QD+IQKLTD+FV +IDKL+++KE Sbjct: 121 EGEDAKVAVRNIRRDANEALKKMVKDKACSEDEERRAQDDIQKLTDRFVQQIDKLLTEKE 180 Query: 181 KEVMTV 186 KEVMTV Sbjct: 181 KEVMTV 186 >ref|ZP_07676864.1| ribosome recycling factor [Ralstonia sp. 5_7_47FAA] gb|EFP64867.1| ribosome recycling factor [Ralstonia sp. 5_7_47FAA] Length = 186 Score = 300 bits (767), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 147/186 (79%), Positives = 166/186 (89%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 MSVADVKKN+EQKM KSIE LK +LAK+RTGRAHTGLLD V VDYYGS +SQVAN+TL Sbjct: 1 MSVADVKKNAEQKMQKSIEALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 +DARTIGVQP+EKKMV VEKAIREADLGLNPAT G++IRVP P LTEERRKE+ K+VKG Sbjct: 61 VDARTIGVQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKG 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 E EDAK+AVRN+RR+ NE LKKLVKDK SEDDERRG D+IQKLTDKFVAEIDKLV++K+ Sbjct: 121 EGEDAKVAVRNLRRDANEQLKKLVKDKAISEDDERRGGDDIQKLTDKFVAEIDKLVAEKD 180 Query: 181 KEVMTV 186 KE+MTV Sbjct: 181 KEIMTV 186 >ref|YP_002981306.1| ribosome recycling factor [Ralstonia pickettii 12D] gb|ACS62634.1| ribosome recycling factor [Ralstonia pickettii 12D] Length = 186 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 146/186 (78%), Positives = 166/186 (89%) Query: 1 MSVADVKKNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTL 60 MSVADVKKN+EQKM KSI+ LK +LAK+RTGRAHTGLLD V VDYYGS +SQVAN+TL Sbjct: 1 MSVADVKKNAEQKMQKSIDALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTL 60 Query: 61 IDARTIGVQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKG 120 +DARTIGVQP+EKKMV VEKAIREADLGLNPAT G++IRVP P LTEERRKE+ K+VKG Sbjct: 61 VDARTIGVQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKG 120 Query: 121 EAEDAKIAVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKE 180 E EDAK+AVRN+RR+ NE LKKLVKDK SEDDERRG D+IQKLTDKFVAEIDKLV++K+ Sbjct: 121 EGEDAKVAVRNLRRDANEQLKKLVKDKAISEDDERRGGDDIQKLTDKFVAEIDKLVAEKD 180 Query: 181 KEVMTV 186 KE+MTV Sbjct: 181 KEIMTV 186