BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0099.p (172 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775594.1| transmembrane protein [Herbaspirillum serope... 330 7e-89 ref|YP_004751995.1| outer membrane chaperone Skp [Collimonas fun... 246 1e-63 ref|ZP_08275638.1| Outer membrane protein H precursor [Oxalobact... 220 7e-56 ref|YP_001119754.1| outer membrane chaperone Skp [Burkholderia v... 219 1e-55 ref|YP_001579451.1| outer membrane chaperone Skp [Burkholderia m... 217 5e-55 ref|YP_001765313.1| outer membrane chaperone Skp [Burkholderia c... 216 7e-55 ref|YP_773933.1| outer membrane chaperone Skp [Burkholderia ambi... 216 9e-55 ref|ZP_03588430.1| outer membrane protein [Burkholderia multivor... 216 1e-54 ref|ZP_02907266.1| outer membrane chaperone Skp (OmpH) [Burkhold... 216 1e-54 ref|YP_625905.1| outer membrane chaperone Skp (OmpH) [Burkholder... 216 1e-54 >ref|YP_003775594.1| transmembrane protein [Herbaspirillum seropedicae SmR1] emb|CAM32574.1| Transmembrane protein [Herbaspirillum seropedicae] gb|ADJ63686.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 169 Score = 330 bits (845), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 169/169 (100%), Positives = 169/169 (100%) Query: 4 MTKSFLSLQTVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFAKR 63 MTKSFLSLQTVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFAKR Sbjct: 1 MTKSFLSLQTVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFAKR 60 Query: 64 DRDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQRRN 123 DRDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQRRN Sbjct: 61 DRDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQRRN 120 Query: 124 EELAVVLERTNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELAK 172 EELAVVLERTNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELAK Sbjct: 121 EELAVVLERTNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELAK 169 >ref|YP_004751995.1| outer membrane chaperone Skp [Collimonas fungivorans Ter331] gb|AEK61172.1| outer membrane chaperone Skp [Collimonas fungivorans Ter331] Length = 199 Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 127/174 (72%), Positives = 147/174 (84%), Gaps = 2/174 (1%) Query: 1 LKFMTKSFLSLQTV-VMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAE 59 LK + K+F SL T ++A CL S APA A E SKIAFVS+ERI REA PAKAAQSK+EAE Sbjct: 26 LKSLIKTFTSLPTAGLLAVCLLSAAPARADEGSKIAFVSSERILREATPAKAAQSKIEAE 85 Query: 60 FAKRDRDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLN 119 F+KRD+DLQD A RLK +DKLDKD+AV+S+++R KRQR+LSDLDK+FQRKQREFREDLN Sbjct: 86 FSKRDKDLQDQATRLKGMADKLDKDSAVISETERIKRQRELSDLDKDFQRKQREFREDLN 145 Query: 120 QRRNEELAVVLERTNKVIRQIAEAEKYDIVFQE-AVYASKRIDITDKVLKELAK 172 QRRNEELA+VLER+ K I+QIAEAEKYD+VFQE VY S RIDITDKVLK L K Sbjct: 146 QRRNEELAIVLERSTKAIKQIAEAEKYDMVFQEGGVYVSPRIDITDKVLKILNK 199 >ref|ZP_08275638.1| Outer membrane protein H precursor [Oxalobacteraceae bacterium IMCC9480] gb|EGF30884.1| Outer membrane protein H precursor [Oxalobacteraceae bacterium IMCC9480] Length = 150 Score = 220 bits (560), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 111/147 (75%), Positives = 133/147 (90%), Gaps = 1/147 (0%) Query: 26 AHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFAKRDRDLQDMAARLKTQSDKLDKDA 85 AHAQES +I FV+TERIFREA PAK AQ K++ EF+KR+++LQ++AARLK S+KLDKD Sbjct: 5 AHAQES-RIGFVNTERIFREATPAKTAQVKIDQEFSKREKELQEVAARLKAMSEKLDKDV 63 Query: 86 AVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQRRNEELAVVLERTNKVIRQIAEAEK 145 AV+S+SDR++RQR+L+DLDK+FQRKQREFREDLNQR+NEELA VLERT +VI+QIAEAEK Sbjct: 64 AVISESDRSRRQRELTDLDKDFQRKQREFREDLNQRKNEELASVLERTTRVIKQIAEAEK 123 Query: 146 YDIVFQEAVYASKRIDITDKVLKELAK 172 YDIVFQ+AVYAS RIDITDKVLK L K Sbjct: 124 YDIVFQDAVYASPRIDITDKVLKALNK 150 >ref|YP_001119754.1| outer membrane chaperone Skp [Burkholderia vietnamiensis G4] gb|ABO54919.1| outer membrane chaperone Skp (OmpH) [Burkholderia vietnamiensis G4] Length = 175 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 111/167 (66%), Positives = 136/167 (81%), Gaps = 3/167 (1%) Query: 5 TKSFLSLQTVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFAKRD 64 +K + T+ +A A AHAQ+ ++IA V+++RI RE+APAKAAQ+KLEAEFAKRD Sbjct: 7 SKRVIGALTIALA---LGAATAHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFAKRD 63 Query: 65 RDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQRRNE 124 +DLQD+AARLK+ SD LDK+ A LS +DRA++QRDL+ LD +FQRKQREFREDLNQRRNE Sbjct: 64 KDLQDLAARLKSMSDSLDKNGASLSAADRAQKQRDLAQLDTDFQRKQREFREDLNQRRNE 123 Query: 125 ELAVVLERTNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELA 171 ELA VLER NKVI+QIAE + YD++ QEAVY S RIDITDKVLK LA Sbjct: 124 ELAAVLERANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALA 170 >ref|YP_001579451.1| outer membrane chaperone Skp [Burkholderia multivorans ATCC 17616] ref|YP_001946434.1| outer membrane protein [Burkholderia multivorans ATCC 17616] gb|ABX14954.1| outer membrane chaperone Skp (OmpH) [Burkholderia multivorans ATCC 17616] dbj|BAG43898.1| outer membrane protein [Burkholderia multivorans ATCC 17616] Length = 175 Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 112/170 (65%), Positives = 138/170 (81%), Gaps = 4/170 (2%) Query: 2 KFMTKSFLSLQTVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFA 61 KF + +L TV +A A AHAQ+ ++IA V+++RI RE+APAKAAQ+KLEAEFA Sbjct: 5 KFSKRVMCAL-TVALA---LGAATAHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFA 60 Query: 62 KRDRDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQR 121 KRD+DLQDMAARLK+ SD LD++ A LS +DRA++QRDL+ LD +FQRKQREFREDLNQR Sbjct: 61 KRDKDLQDMAARLKSMSDSLDRNGASLSAADRAQKQRDLAQLDTDFQRKQREFREDLNQR 120 Query: 122 RNEELAVVLERTNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELA 171 RNEELA VL++ NKVI+QIAE + YD++ QEAVY S RIDITDKVLK LA Sbjct: 121 RNEELAAVLDKANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALA 170 >ref|YP_001765313.1| outer membrane chaperone Skp [Burkholderia cenocepacia MC0-3] gb|ACA91191.1| outer membrane chaperone Skp (OmpH) [Burkholderia cenocepacia MC0-3] Length = 175 Score = 216 bits (551), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 112/170 (65%), Positives = 137/170 (80%), Gaps = 4/170 (2%) Query: 2 KFMTKSFLSLQTVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFA 61 KF + +L TV +A A HAQ+ ++IA V+++RI RE+APAKAAQ+KLEAEFA Sbjct: 5 KFSKRVMCAL-TVALA---LGAATVHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFA 60 Query: 62 KRDRDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQR 121 KRD+DLQD+AARLK+ SD LDK+ A LS +DRA++QRDL+ LD +FQRKQREFREDLNQR Sbjct: 61 KRDKDLQDLAARLKSMSDSLDKNGASLSAADRAQKQRDLAQLDTDFQRKQREFREDLNQR 120 Query: 122 RNEELAVVLERTNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELA 171 RNEELA VLE+ NKVI+QIAE + YD++ QEAVY S RIDITDKVLK LA Sbjct: 121 RNEELAAVLEKANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALA 170 >ref|YP_773933.1| outer membrane chaperone Skp [Burkholderia ambifaria AMMD] ref|ZP_02890912.1| outer membrane chaperone Skp (OmpH) [Burkholderia ambifaria IOP40-10] ref|YP_001808610.1| outer membrane chaperone Skp [Burkholderia ambifaria MC40-6] gb|ABI87599.1| outer membrane chaperone Skp (OmpH) [Burkholderia ambifaria AMMD] gb|EDT03502.1| outer membrane chaperone Skp (OmpH) [Burkholderia ambifaria IOP40-10] gb|ACB64394.1| outer membrane chaperone Skp (OmpH) [Burkholderia ambifaria MC40-6] Length = 175 Score = 216 bits (550), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 112/170 (65%), Positives = 137/170 (80%), Gaps = 4/170 (2%) Query: 2 KFMTKSFLSLQTVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFA 61 KF + +L TV +A A AHAQ+ ++IA V+++RI RE+APAK AQ+KLEAEFA Sbjct: 5 KFSKRVMCAL-TVALA---LGAATAHAQDVARIAAVNSDRILRESAPAKVAQTKLEAEFA 60 Query: 62 KRDRDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQR 121 KRD++LQD+AARLK+ SD LDK+ A LS +DRA++QRDL+ LD +FQRKQREFREDLNQR Sbjct: 61 KRDKELQDLAARLKSMSDSLDKNGASLSAADRAQKQRDLAQLDTDFQRKQREFREDLNQR 120 Query: 122 RNEELAVVLERTNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELA 171 RNEELA VLER NKVI+QIAE + YD++ QEAVY S RIDITDKVLK LA Sbjct: 121 RNEELAAVLERANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALA 170 >ref|ZP_03588430.1| outer membrane protein [Burkholderia multivorans CGD1] gb|EED97132.1| outer membrane protein [Burkholderia multivorans CGD1] Length = 165 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 109/159 (68%), Positives = 133/159 (83%), Gaps = 3/159 (1%) Query: 13 TVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFAKRDRDLQDMAA 72 TV +A A AHAQ+ ++IA V+++RI RE+APAKAAQ+KLEAEFAKRD+DLQDMAA Sbjct: 5 TVALA---LGAATAHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFAKRDKDLQDMAA 61 Query: 73 RLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQRRNEELAVVLER 132 RLK+ SD LD++ A LS +DRA++QRDL+ LD +FQRKQREFREDLNQRRNEELA VL++ Sbjct: 62 RLKSMSDSLDRNGASLSAADRAQKQRDLAQLDTDFQRKQREFREDLNQRRNEELAAVLDK 121 Query: 133 TNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELA 171 NKVI+QIAE + YD++ QEAVY S RIDITDKVLK LA Sbjct: 122 ANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALA 160 >ref|ZP_02907266.1| outer membrane chaperone Skp (OmpH) [Burkholderia ambifaria MEX-5] gb|EDT41606.1| outer membrane chaperone Skp (OmpH) [Burkholderia ambifaria MEX-5] Length = 175 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 112/170 (65%), Positives = 136/170 (80%), Gaps = 4/170 (2%) Query: 2 KFMTKSFLSLQTVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFA 61 KF + +L TV +A A AHAQ+ ++IA V+++RI RE+APAK AQ+KLEAEFA Sbjct: 5 KFSKRVMCAL-TVALA---LGAATAHAQDVARIAAVNSDRILRESAPAKVAQTKLEAEFA 60 Query: 62 KRDRDLQDMAARLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQR 121 KRD+DLQD+AARLK+ SD LDK+ LS +DRA++QRDL+ LD +FQRKQREFREDLNQR Sbjct: 61 KRDKDLQDLAARLKSMSDSLDKNGPSLSAADRAQKQRDLAQLDTDFQRKQREFREDLNQR 120 Query: 122 RNEELAVVLERTNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELA 171 RNEELA VLER NKVI+QIAE + YD++ QEAVY S RIDITDKVLK LA Sbjct: 121 RNEELAAVLERANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALA 170 >ref|YP_625905.1| outer membrane chaperone Skp (OmpH) [Burkholderia cenocepacia AU 1054] ref|YP_835654.1| outer membrane chaperone Skp [Burkholderia cenocepacia HI2424] gb|ABF80932.1| outer membrane chaperone Skp (OmpH) [Burkholderia cenocepacia AU 1054] gb|ABK08761.1| outer membrane chaperone Skp (OmpH) [Burkholderia cenocepacia HI2424] Length = 165 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 109/159 (68%), Positives = 132/159 (83%), Gaps = 3/159 (1%) Query: 13 TVVMAACLFSLAPAHAQESSKIAFVSTERIFREAAPAKAAQSKLEAEFAKRDRDLQDMAA 72 TV +A A HAQ+ ++IA V+++RI RE+APAKAAQ+KLEAEFAKRD+DLQD+AA Sbjct: 5 TVALA---LGAATVHAQDVARIAAVNSDRILRESAPAKAAQTKLEAEFAKRDKDLQDLAA 61 Query: 73 RLKTQSDKLDKDAAVLSDSDRAKRQRDLSDLDKEFQRKQREFREDLNQRRNEELAVVLER 132 RLK+ SD LDK+ A LS +DRA++QRDL+ LD +FQRKQREFREDLNQRRNEELA VLE+ Sbjct: 62 RLKSMSDSLDKNGASLSAADRAQKQRDLAQLDTDFQRKQREFREDLNQRRNEELAAVLEK 121 Query: 133 TNKVIRQIAEAEKYDIVFQEAVYASKRIDITDKVLKELA 171 NKVI+QIAE + YD++ QEAVY S RIDITDKVLK LA Sbjct: 122 ANKVIKQIAEQQNYDLIVQEAVYVSPRIDITDKVLKALA 160