BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0079.p (184 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBE68844.1| Formyl transferase domain protein [NC10 bacteriu... 140 6e-32 ref|YP_001859228.1| formyl transferase domain-containing protein... 131 4e-29 ref|ZP_01871756.1| formyl transferase domain protein [Caminibact... 130 1e-28 ref|YP_003503375.1| formyl transferase domain-containing protein... 128 4e-28 ref|ZP_04156033.1| ATP-dependent glycine adenylase [Bacillus myc... 122 2e-26 ref|ZP_04150261.1| ATP-dependent glycine adenylase [Bacillus pse... 122 3e-26 ref|YP_002463563.1| formyl transferase domain-containing protein... 121 4e-26 ref|YP_002772373.1| linear pentadecapeptide gramicidin synthetas... 116 1e-24 sp|Q70LM7.1|LGRA_BREPA RecName: Full=Linear gramicidin synthase ... 107 8e-22 ref|YP_004596866.1| formyl transferase domain-containing protein... 93 2e-17 >emb|CBE68844.1| Formyl transferase domain protein [NC10 bacterium 'Dutch sediment'] Length = 197 Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 70/156 (44%), Positives = 101/156 (64%), Gaps = 7/156 (4%) Query: 21 YDFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPNFWSFFDCTPSGVTIHLID 80 YDF+VSYGYRH+++++ + + + I+NLHISYLPWNRG+ PN WSF D TP GV+IH +D Sbjct: 41 YDFLVSYGYRHLIRQDWLWAMPSQIVNLHISYLPWNRGSDPNLWSFVDDTPKGVSIHFVD 100 Query: 81 DGVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHIEEIIEASYTPLPQRRHGS 140 G+DTGP++ +R V F + T A +Y +L +EDLFRE I S TP+PQ GS Sbjct: 101 GGLDTGPLVARRKV-FPEPGDTLASSYARLSAAVEDLFRESWPAIRAGSVTPVPQPPGGS 159 Query: 141 YHKSAELPEQFA-----GWDANIDEEVRRLDELLKK 171 H+ + E+ A GWD +++ ++ L +K Sbjct: 160 CHRLKDR-ERVAHLLTRGWDTPVEKLMKSFRILTEK 194 >ref|YP_001859228.1| formyl transferase domain-containing protein [Burkholderia phymatum STM815] gb|ACC72182.1| formyl transferase domain protein [Burkholderia phymatum STM815] Length = 206 Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 85/126 (67%) Query: 22 DFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPNFWSFFDCTPSGVTIHLIDD 81 D +VS+ YRHILK++++ ++ +NLHIS LP+NRGA PN WSF D TP GV+IHLID+ Sbjct: 43 DLIVSHSYRHILKRDVLAAAPGRFINLHISLLPYNRGADPNLWSFLDATPKGVSIHLIDE 102 Query: 82 GVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHIEEIIEASYTPLPQRRHGSY 141 G+DTG +L QR V+F + +T A +Y +L I DLF ++ + + P Q G++ Sbjct: 103 GIDTGALLLQREVSFDEASETLASSYAKLQQAINDLFIDNWSSLRDGHIAPRAQSGAGTF 162 Query: 142 HKSAEL 147 H+++E Sbjct: 163 HRASEF 168 >ref|ZP_01871756.1| formyl transferase domain protein [Caminibacter mediatlanticus TB-2] gb|EDM23565.1| formyl transferase domain protein [Caminibacter mediatlanticus TB-2] Length = 195 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/127 (49%), Positives = 89/127 (70%), Gaps = 3/127 (2%) Query: 22 DFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPNFWSFFDCTPSGVTIHLIDD 81 D ++SY Y++I+KKE + ++ +NLHISYLP+NRGAHPN WSF + T GVTIHLID+ Sbjct: 46 DIIISYNYKYIIKKEFL--TEYYFINLHISYLPFNRGAHPNIWSFIENTKKGVTIHLIDE 103 Query: 82 GVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHIEEIIEASYTPLPQRRHGSY 141 G+DTG IL Q+ V K++ TF TYK+L I+ LF+++ ++II P Q + G++ Sbjct: 104 GIDTGDILVQKRVVLDKKE-TFKSTYKKLHFHIQMLFKQNFKKIINQKIKPKQQPKQGTF 162 Query: 142 HKSAELP 148 H S ELP Sbjct: 163 HISKELP 169 >ref|YP_003503375.1| formyl transferase domain-containing protein [Denitrovibrio acetiphilus DSM 12809] gb|ADD67419.1| formyl transferase domain protein [Denitrovibrio acetiphilus DSM 12809] Length = 218 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 103/170 (60%), Gaps = 8/170 (4%) Query: 7 EVWHTQDKIQ----STQGYDFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPN 62 EV+ T +KI +++++SYGYR+I+ KEIIE + +NLHIS+LPWN+GA PN Sbjct: 25 EVFPTSEKISLEFIEENQFEYLISYGYRYIITKEIIEYFNNTGINLHISFLPWNKGADPN 84 Query: 63 FWSFFDCTPSGVTIHLIDDGVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHI 122 WSF + TP GVTIH +D+G+DTG I+ Q+ V F +++T A +Y +L ++I++LF+E+ Sbjct: 85 LWSFVEETPKGVTIHYLDEGIDTGDIIVQKEVEFDSDKETLASSYDKLQMEIQNLFKENW 144 Query: 123 EEIIEASYTPLPQRRHGSYHKSAELPEQFA----GWDANIDEEVRRLDEL 168 +I Q GS HK + F GW+ I + + EL Sbjct: 145 LDIKNGKCQRKKQLGDGSIHKVKDKQPFFETLADGWNTKISDFEEYIAEL 194 >ref|ZP_04156033.1| ATP-dependent glycine adenylase [Bacillus mycoides Rock3-17] ref|ZP_04161857.1| ATP-dependent glycine adenylase [Bacillus mycoides Rock1-4] gb|EEM06449.1| ATP-dependent glycine adenylase [Bacillus mycoides Rock1-4] gb|EEM12259.1| ATP-dependent glycine adenylase [Bacillus mycoides Rock3-17] Length = 192 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 5/147 (3%) Query: 22 DFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPNFWSFFDCTPSGVTIHLIDD 81 DF+VSYGYR+++ IIE + I+NLHISYLPWN+GA PN WSF + TP GVTIH +++ Sbjct: 42 DFIVSYGYRYMIPPSIIEKFNNKIINLHISYLPWNKGADPNLWSFLEDTPKGVTIHYVNN 101 Query: 82 GVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHIEEIIEASYTPLPQRRHGSY 141 G+DTG I+ Q V + KE T +Y +L +IE LF E+ + I PQ GSY Sbjct: 102 GLDTGDIITQSEVPY-KENDTLKTSYDRLCQEIERLFIENWKFIYSGKVMRKPQPSGGSY 160 Query: 142 H----KSAELPEQFAGWDANIDEEVRR 164 H K L GW+ ++ + + + Sbjct: 161 HRLKDKKIYLHLLTNGWNTSVKDIIGK 187 >ref|ZP_04150261.1| ATP-dependent glycine adenylase [Bacillus pseudomycoides DSM 12442] gb|EEM18057.1| ATP-dependent glycine adenylase [Bacillus pseudomycoides DSM 12442] Length = 192 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/147 (43%), Positives = 88/147 (59%), Gaps = 5/147 (3%) Query: 22 DFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPNFWSFFDCTPSGVTIHLIDD 81 DF+VSYGYR+++ IIE + I+NLHISYLPWN+GA PN WSF + TP GVTIH +++ Sbjct: 42 DFIVSYGYRYMIPPSIIEKFNNKIINLHISYLPWNKGADPNLWSFLEDTPKGVTIHYVNN 101 Query: 82 GVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHIEEIIEASYTPLPQRRHGSY 141 G+DTG I+ Q V + KE T Y +L +IE LF E+ + I PQ GSY Sbjct: 102 GLDTGDIITQSEVPY-KENDTLKTAYDRLCQEIERLFIENWKFIYSGKVMRKPQPSGGSY 160 Query: 142 H----KSAELPEQFAGWDANIDEEVRR 164 H K L GW+ ++ + + + Sbjct: 161 HRLKDKKIYLHLLTNGWNTSVKDIIGK 187 >ref|YP_002463563.1| formyl transferase domain-containing protein [Chloroflexus aggregans DSM 9485] gb|ACL25127.1| formyl transferase domain protein [Chloroflexus aggregans DSM 9485] Length = 214 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 63/142 (44%), Positives = 90/142 (63%), Gaps = 7/142 (4%) Query: 22 DFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPNFWSFFDCTPSGVTIHLIDD 81 DF+VSYGYRHI+KK+++ +NLHISYLPWNRGA PNFWSF + TP GVTIH +++ Sbjct: 42 DFIVSYGYRHIIKKDVLLRYTGRAINLHISYLPWNRGADPNFWSFVEDTPKGVTIHYLNE 101 Query: 82 GVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHIEEIIEASYTPLPQRRHGSY 141 GVDTG I+ Q+ V FS E T +Y +L +I+ LF+++ I Q+ G++ Sbjct: 102 GVDTGDIIVQKRVTFS-ESDTLRTSYDKLQEEIQALFKDNWASIRTGECHRKRQQGKGAF 160 Query: 142 HKSAELPEQFA-----GWDANI 158 ++ + E+ + GWD I Sbjct: 161 YRLKD-KERLSHLLTRGWDTPI 181 >ref|YP_002772373.1| linear pentadecapeptide gramicidin synthetase LgrA [Brevibacillus brevis NBRC 100599] dbj|BAH43869.1| linear pentadecapeptide gramicidin synthetase LgrA [Brevibacillus brevis NBRC 100599] Length = 2275 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/121 (48%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 22 DFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPNFWSFFDCTPSGVTIHLIDD 81 D+VVSY Y +IL KEI+ ILNLH S LPWN+G P FWS +D TP GVT+HLID+ Sbjct: 45 DYVVSYAYGYILGKEIVSHFKGRILNLHTSLLPWNKGRDPVFWSIWDETPKGVTLHLIDE 104 Query: 82 GVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHIEEIIEASYTPLPQRRHGSY 141 +DTG IL Q ++F E+ T Y + IEDLF E I+ TP+PQ G+ Sbjct: 105 NIDTGNILVQEEISFD-EEDTLIDCYNKANQVIEDLFIREWENIVSGRITPIPQPSGGTI 163 Query: 142 H 142 H Sbjct: 164 H 164 >sp|Q70LM7.1|LGRA_BREPA RecName: Full=Linear gramicidin synthase subunit A; Includes: RecName: Full=ATP-dependent valine/leucine adenylase; Short=Val/LeuA; AltName: Full=Valine/leucine activase; Includes: RecName: Full=ATP-dependent glycine adenylase; Short=GlyA; AltName: Full=Glycine activase emb|CAD92849.1| nonribosomal peptide synthetase [Brevibacillus brevis] Length = 2273 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 80/144 (55%), Gaps = 5/144 (3%) Query: 7 EVWHTQDKIQS----TQGYDFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPN 62 EV Q+K+ + Q D++VSY Y +IL KEI+ I+NLH S LPWN+G P Sbjct: 26 EVVICQEKVHAQSANLQEIDWIVSYAYGYILDKEIVSRFRGRIINLHPSLLPWNKGRDPV 85 Query: 63 FWSFFDCTPSGVTIHLIDDGVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHI 122 FWS +D TP GVTIHLID+ VDTG IL Q + F+ E T Y + IE+LF Sbjct: 86 FWSVWDETPKGVTIHLIDEHVDTGDILVQEEIAFADED-TLLDCYNKANQAIEELFIREW 144 Query: 123 EEIIEASYTPLPQRRHGSYHKSAE 146 E I+ P Q G+ H A+ Sbjct: 145 ENIVHGRIAPYRQTAGGTLHFKAD 168 >ref|YP_004596866.1| formyl transferase domain-containing protein [Halopiger xanaduensis SH-6] gb|AEH36987.1| formyl transferase domain protein [Halopiger xanaduensis SH-6] Length = 225 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 8/154 (5%) Query: 22 DFVVSYGYRHILKKEIIESSDAPILNLHISYLPWNRGAHPNFWSFFDCTPSGVTIHLIDD 81 DF+VS GYR ++ + I+E +NLH +YLP+NRGA+PN WS D TP+GVT+H +D Sbjct: 50 DFLVSCGYRRLVPESILEIPTEGCVNLHPAYLPYNRGANPNVWSIVDNTPAGVTLHYMDS 109 Query: 82 GVDTGPILYQRYVNFSKEQKTFAQTYKQLIVDIEDLFREHIEEIIEASYTPLPQRRH-GS 140 +DTG I+ +R V E T Y++L DLFR+ +I + + Q G+ Sbjct: 110 SLDTGDIIARRTVPTDFED-TGKDLYRRLEDAQVDLFRDAWPDIEAGDPSTITQDSDAGT 168 Query: 141 YHKSAELPEQFAGWDANID-EEVRRLDELLKKHR 173 YH++ + E +D +E R+ E L + R Sbjct: 169 YHETTDFKEL-----CRLDPDETVRVKEFLDRLR 197