BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0075.p (211 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775617.1| organic radical activating enzyme protein [H... 437 e-121 ref|YP_001099678.1| hypothetical protein HEAR1379 [Herminiimonas... 356 1e-96 emb|CAL61551.2| Conserved hypothetical protein [Herminiimonas ar... 355 2e-96 ref|YP_001353700.1| organic radical activating enzyme [Janthinob... 345 3e-93 ref|YP_004752028.1| queuosine Biosynthesis [Collimonas fungivora... 343 7e-93 ref|YP_523861.1| organic radical activating-like protein [Rhodof... 322 2e-86 ref|ZP_04579117.1| organic radical activating enzyme [Oxalobacte... 322 2e-86 ref|ZP_08273228.1| Queuosine Biosynthesis QueE Radical SAM [Oxal... 311 3e-83 ref|ZP_04576314.1| organic radical activating enzyme [Oxalobacte... 311 6e-83 ref|YP_583723.1| organic radical activating enzyme [Cupriavidus ... 310 9e-83 >ref|YP_003775617.1| organic radical activating enzyme protein [Herbaspirillum seropedicae SmR1] gb|ADJ63709.1| organic radical activating enzyme protein [Herbaspirillum seropedicae SmR1] Length = 229 Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust. Identities = 210/211 (99%), Positives = 210/211 (99%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDR RAICQFCDTDFVGTDGEN Sbjct: 19 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRVRAICQFCDTDFVGTDGEN 78 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG Sbjct: 79 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 138 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ Sbjct: 139 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 198 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP Sbjct: 199 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 229 >ref|YP_001099678.1| hypothetical protein HEAR1379 [Herminiimonas arsenicoxydans] Length = 248 Score = 356 bits (913), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 168/211 (79%), Positives = 180/211 (85%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRE DRA A+CQFCDTDFVGTDGE Sbjct: 38 LTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRESDRATAVCQFCDTDFVGTDGEG 97 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKF +LA I++LWPA YA SKYVVFTGGEPLLQLD LI AMHAVGFEIAIETNG Sbjct: 98 GGKFADAVKLANTINALWPASYAASKYVVFTGGEPLLQLDTELINAMHAVGFEIAIETNG 157 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 T+ VP GVDWICVSPKMGS+L VR+GSELKVV+PQ Q L YE LDFQHF +QPMDG Sbjct: 158 TLPVPAGVDWICVSPKMGSQLVVRKGSELKVVIPQLAQSLAAYEDLDFQHFFVQPMDGPL 217 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 A NTRLAIE+ K NPKWKLS+QTHKLL IP Sbjct: 218 AEQNTRLAIEICKKNPKWKLSLQTHKLLQIP 248 >emb|CAL61551.2| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 211 Score = 355 bits (912), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 168/211 (79%), Positives = 180/211 (85%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRE DRA A+CQFCDTDFVGTDGE Sbjct: 1 MTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRESDRATAVCQFCDTDFVGTDGEG 60 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKF +LA I++LWPA YA SKYVVFTGGEPLLQLD LI AMHAVGFEIAIETNG Sbjct: 61 GGKFADAVKLANTINALWPASYAASKYVVFTGGEPLLQLDTELINAMHAVGFEIAIETNG 120 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 T+ VP GVDWICVSPKMGS+L VR+GSELKVV+PQ Q L YE LDFQHF +QPMDG Sbjct: 121 TLPVPAGVDWICVSPKMGSQLVVRKGSELKVVIPQLAQSLAAYEDLDFQHFFVQPMDGPL 180 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 A NTRLAIE+ K NPKWKLS+QTHKLL IP Sbjct: 181 AEQNTRLAIEICKKNPKWKLSLQTHKLLQIP 211 >ref|YP_001353700.1| organic radical activating enzyme [Janthinobacterium sp. Marseille] gb|ABR90052.1| organic radical activating enzyme [Janthinobacterium sp. Marseille] Length = 211 Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 161/211 (76%), Positives = 180/211 (85%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TYS+KEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRE DRA A+CQFCDTDFVGT+GE Sbjct: 1 MTYSVKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRESDRATAVCQFCDTDFVGTNGEG 60 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKF + LA I++LWP YA SKYVVFTGGEPLLQLD LI+AMHAVGFEIAIETNG Sbjct: 61 GGKFVDGSTLAHTINALWPESYAASKYVVFTGGEPLLQLDTELIDAMHAVGFEIAIETNG 120 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 T+ VP GVDWICVSPKMGS+L VR+GSELKVV+PQ Q L YE L+F+HF +QPMDG Sbjct: 121 TLPVPAGVDWICVSPKMGSQLVVRKGSELKVVIPQAEQSLAAYEALEFEHFFVQPMDGPL 180 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 A NT+LAI++ K NPKWKLS+QTHKLL IP Sbjct: 181 AEQNTKLAIDVCKRNPKWKLSLQTHKLLQIP 211 >ref|YP_004752028.1| queuosine Biosynthesis [Collimonas fungivorans Ter331] gb|AEK61205.1| Queuosine Biosynthesis [Collimonas fungivorans Ter331] Length = 211 Score = 343 bits (881), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 161/211 (76%), Positives = 179/211 (84%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TYSIKEIFYTLQGEG HAGRPAVFCRFSGCNLW+GREEDR+ A+CQFCDTDFVGTDGE Sbjct: 1 MTYSIKEIFYTLQGEGTHAGRPAVFCRFSGCNLWSGREEDRSTAVCQFCDTDFVGTDGEG 60 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKFK A LA I++LWP YA SK+VVFTGGEPLLQLDAALI++MHA GFEIAIETNG Sbjct: 61 GGKFKDSAALADTINALWPETYAASKFVVFTGGEPLLQLDAALIDSMHAAGFEIAIETNG 120 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 T+ P G+DWICVSPKMGS LK+R+G+ELKVV+PQ GQ L YE LDF+HF +Q MDG Q Sbjct: 121 TLLPPPGIDWICVSPKMGSVLKLRKGNELKVVIPQVGQSLAAYESLDFEHFYVQAMDGPQ 180 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 A N LAIE K NPKWKLS+QTHKLL IP Sbjct: 181 LAHNLELAIETCKRNPKWKLSLQTHKLLQIP 211 >ref|YP_523861.1| organic radical activating-like protein [Rhodoferax ferrireducens T118] gb|ABD70330.1| Organic radical activating enzymes-like [Rhodoferax ferrireducens T118] Length = 211 Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 148/211 (70%), Positives = 173/211 (81%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TYS+KEIFYTLQGEG HAGRPAVFCRF+GCNLW+G E+ RA A+CQFCDTDFVGTDGE Sbjct: 1 MTYSVKEIFYTLQGEGHHAGRPAVFCRFAGCNLWSGAEDSRASAVCQFCDTDFVGTDGEG 60 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKF+ LAA I+ LWPA Y SKYVVFTGGEPLLQL+AALI+AMH GFE+AIETNG Sbjct: 61 GGKFRDAETLAAAINQLWPASYPASKYVVFTGGEPLLQLNAALIDAMHDAGFEVAIETNG 120 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 T+ VP+GVDW+CVSPKMGS L VR G+E+KVV+PQ GQ LD+Y L F H+ +Q MDG Sbjct: 121 TLPVPEGVDWVCVSPKMGSALVVRAGNEIKVVIPQAGQVLDDYACLAFDHYFVQAMDGPL 180 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 N R+AI+ K +P+WKLS+QTHKLL IP Sbjct: 181 QKENLRMAIDYCKAHPQWKLSLQTHKLLQIP 211 >ref|ZP_04579117.1| organic radical activating enzyme [Oxalobacter formigenes OXCC13] gb|EEO30090.1| organic radical activating enzyme [Oxalobacter formigenes OXCC13] Length = 219 Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 147/211 (69%), Positives = 174/211 (82%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TYS+KEIFYTLQGEGA +GRPAVFCRFSGCNLW+GRE DR+R++C+FCDTDFVGTDG N Sbjct: 9 LTYSVKEIFYTLQGEGARSGRPAVFCRFSGCNLWSGREADRSRSVCRFCDTDFVGTDGVN 68 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKF +L++ I+SLWPA + ++YVVFTGGEPLLQLDAALI+AMH GFEIAIETNG Sbjct: 69 GGKFAQAEDLSSFIESLWPAGFMENRYVVFTGGEPLLQLDAALIDAMHGKGFEIAIETNG 128 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 T+ VPDG+DW+CVSPK G++L V G ELKVVVPQPGQ L +YE L F HF +QPMDG Sbjct: 129 TLAVPDGIDWVCVSPKAGADLAVAGGDELKVVVPQPGQILADYESLAFTHFYVQPMDGEN 188 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 N ++AI+ NPKWKLS+QTHK L IP Sbjct: 189 RLQNVKIAIDTCLQNPKWKLSLQTHKYLQIP 219 >ref|ZP_08273228.1| Queuosine Biosynthesis QueE Radical SAM [Oxalobacteraceae bacterium IMCC9480] gb|EGF33296.1| Queuosine Biosynthesis QueE Radical SAM [Oxalobacteraceae bacterium IMCC9480] Length = 207 Score = 311 bits (798), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 147/207 (71%), Positives = 167/207 (80%) Query: 5 IKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGENGGKF 64 +KEIFYTLQGEG HAGRPAVFCRF+GCNLW+GRE DRA A+CQFCDTDFVGTDG GGKF Sbjct: 1 MKEIFYTLQGEGTHAGRPAVFCRFAGCNLWSGRESDRATAVCQFCDTDFVGTDGVMGGKF 60 Query: 65 KSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNGTIDV 124 LAA ++SLWPA Y SK++V TGGEP+LQLD ALI+A+HA GF IAIETNGT+ V Sbjct: 61 ADAESLAATVNSLWPADYPASKFIVITGGEPMLQLDLALIDALHAQGFMIAIETNGTLPV 120 Query: 125 PDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQAAAN 184 P VDWICVSPKMGS+L R G+ELKVV+PQ GQ L YE LDF+HF LQPMD AA N Sbjct: 121 PPEVDWICVSPKMGSKLVQRSGNELKVVIPQLGQDLLMYEALDFEHFYLQPMDSPTAARN 180 Query: 185 TRLAIEMVKNNPKWKLSIQTHKLLNIP 211 T AI+ K +PKWKLS+QTHK+L IP Sbjct: 181 TERAIDHCKRHPKWKLSVQTHKILQIP 207 >ref|ZP_04576314.1| organic radical activating enzyme [Oxalobacter formigenes HOxBLS] gb|EEO27276.1| organic radical activating enzyme [Oxalobacter formigenes HOxBLS] Length = 234 Score = 311 bits (796), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 145/211 (68%), Positives = 166/211 (78%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 + YS+KEIFYTLQGEGA GRPAVFCRFSGCNLW+GRE+DRARAIC+FCDTDFVGT GE Sbjct: 24 LAYSVKEIFYTLQGEGARTGRPAVFCRFSGCNLWSGREQDRARAICRFCDTDFVGTSGER 83 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGKF +LA+ I SLWP +A ++YVVFTGGEPLLQLD LI MH GFEIAIETNG Sbjct: 84 GGKFPEAEKLASVIISLWPREHAENRYVVFTGGEPLLQLDRPLIGIMHRAGFEIAIETNG 143 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 TI VP+GVDW+CVSPK+GS L V+ G ELKVV+PQ GQ L +YE L F HF +QPMDG Sbjct: 144 TIPVPEGVDWVCVSPKVGSTLVVKSGDELKVVIPQAGQNLADYEDLSFSHFYVQPMDGEN 203 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNIP 211 N ++AI+ NPKWKL +QTHK L IP Sbjct: 204 RERNIKMAIDTCLKNPKWKLGLQTHKYLQIP 234 >ref|YP_583723.1| organic radical activating enzyme [Cupriavidus metallidurans CH34] gb|ABF08454.1| organic radical activating enzyme [Cupriavidus metallidurans CH34] Length = 211 Score = 310 bits (794), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 145/210 (69%), Positives = 172/210 (81%) Query: 1 VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 60 +TY++KEIFYTLQGEGA+AGR AVFCRFSGCNLWTGREEDRARA+CQFCDTDFVGTDG Sbjct: 1 MTYAVKEIFYTLQGEGANAGRAAVFCRFSGCNLWTGREEDRARAVCQFCDTDFVGTDGTL 60 Query: 61 GGKFKSPAELAAKIDSLWPARYAPSKYVVFTGGEPLLQLDAALIEAMHAVGFEIAIETNG 120 GGK+K+ ELAA + + WP VV TGGEPLLQLDA LI A+HA GFEIAIETNG Sbjct: 61 GGKYKTADELAAVVAAEWPQGAGGKPLVVCTGGEPLLQLDAPLIGALHARGFEIAIETNG 120 Query: 121 TIDVPDGVDWICVSPKMGSELKVRRGSELKVVVPQPGQPLDEYEKLDFQHFLLQPMDGLQ 180 TI+VP+G+DW+CVSPKMGSEL V++G ELKVV+PQ GQ YE+LDFQ+F++Q MDG Sbjct: 121 TIEVPEGIDWVCVSPKMGSELVVKKGDELKVVIPQDGQDFAAYEQLDFQYFMVQAMDGPL 180 Query: 181 AAANTRLAIEMVKNNPKWKLSIQTHKLLNI 210 A NT A+E + +P+W+LS+QTHKLL I Sbjct: 181 ARQNTAAAVEFCQRHPRWRLSLQTHKLLGI 210