BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0055.p (584 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775638.1| Fe3+ ABC transporter permease [Herbaspirillu... 1146 0.0 ref|YP_299713.1| binding-protein dependent transport system inne... 670 0.0 ref|YP_728281.1| ABC transporter permease [Ralstonia eutropha H1... 660 0.0 ref|YP_004680321.1| ABC transporter permease [Cupriavidus necato... 658 0.0 ref|ZP_03839287.1| ABC superfamily ATP binding cassette transpor... 637 e-180 ref|YP_002152765.1| ABC transporter permease [Proteus mirabilis ... 637 e-180 ref|ZP_03802499.1| hypothetical protein PROPEN_00841 [Proteus pe... 636 e-180 ref|YP_351096.1| binding-protein dependent transport system inne... 635 e-180 ref|YP_001796543.1| ABC transporter, inner membrane component [C... 634 e-179 ref|YP_262947.1| putative 2-aminoethylphosphonate ABC transporte... 632 e-179 >ref|YP_003775638.1| Fe3+ ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63730.1| ABC-type Fe3+ transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 578 Score = 1146 bits (2964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/578 (99%), Positives = 576/578 (99%) Query: 7 MPATVSAPLPTLSAETSTSTRPASVPDRSQWLPGLLKWLLLMLLALGLVGPLLFILAQAV 66 MPATVSAPLPTLSAETSTSTRPASVPDRSQWLP LLKWLLLMLLALGLVGPLLFILAQAV Sbjct: 1 MPATVSAPLPTLSAETSTSTRPASVPDRSQWLPALLKWLLLMLLALGLVGPLLFILAQAV 60 Query: 67 LTPAGEWAGSRPFAQLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIPGKG 126 LTPAGEWAGSRPFAQLFANINFLPMLGRSLWVSA TAVVTVPLAYVFAYALQRTCIPGKG Sbjct: 61 LTPAGEWAGSRPFAQLFANINFLPMLGRSLWVSAMTAVVTVPLAYVFAYALQRTCIPGKG 120 Query: 127 LWRGIGLLPLLAPSLLPGIALIYLFGNQGLFKEWMDGSIYGFWGILLGEVFYTFPHALMI 186 LWRGIGLLPLLAPSLLPGIALIYLFGNQGLFKEWMDGSIYGFWGILLGEVFYTFPHALMI Sbjct: 121 LWRGIGLLPLLAPSLLPGIALIYLFGNQGLFKEWMDGSIYGFWGILLGEVFYTFPHALMI 180 Query: 187 LLSALSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKIT 246 LLSALSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKIT Sbjct: 181 LLSALSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKIT 240 Query: 247 GGAYSVLAVEAYKAVVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETY 306 GGAYSVLAVEAYKAVVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETY Sbjct: 241 GGAYSVLAVEAYKAVVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETY 300 Query: 307 VPQPDWRRDGANLLAVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGW 366 VPQPDWRRDGANLLAVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGW Sbjct: 301 VPQPDWRRDGANLLAVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGW 360 Query: 367 LAYWNSLRLACGTSVAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGS 426 LAYWNSLRLACGTSVAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGS Sbjct: 361 LAYWNSLRLACGTSVAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGS 420 Query: 427 LLFFNHPANPFNFLYGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLL 486 LLFFNHPANPFNFLYGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLL Sbjct: 421 LLFFNHPANPFNFLYGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLL 480 Query: 487 KTFIRVTVPLCLPQLLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPA 546 KTFIRVTVPLCLPQLLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPA Sbjct: 481 KTFIRVTVPLCLPQLLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPA 540 Query: 547 AAMSTLILLTSAAASLLMHLGGRRWLARAQAWRRGRAH 584 AAMSTLILLTSAAASLLMHLGGRRWLARAQAWRRGRAH Sbjct: 541 AAMSTLILLTSAAASLLMHLGGRRWLARAQAWRRGRAH 578 >ref|YP_299713.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gb|AAZ64869.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 580 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/559 (65%), Positives = 429/559 (76%), Gaps = 7/559 (1%) Query: 29 ASVPDRS------QWLPGLLKWLLLMLLALGLVGPLLFILAQAVLTPAGEWAGSRPFAQL 82 ASVP R+ P +KWL L+ A+ L+ PL+ + QA AG+WA A+L Sbjct: 20 ASVPQRATGAGLVHRAPAAMKWLWLLGGAIALLLPLVALFRQAWFDGAGQWALGTRLAEL 79 Query: 83 FANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIPGKGLWRGIGLLPLLAPSLL 142 FAN NFLP+LGRS+ VS AT V VPLA+ FAYALQR+ I + LWRGI LLPL APSLL Sbjct: 80 FANPNFLPLLGRSVAVSLATVAVVVPLAFGFAYALQRSRIAVRPLWRGIALLPLFAPSLL 139 Query: 143 PGIALIYLFGNQGLFKE-WMDGSIYGFWGILLGEVFYTFPHALMILLSALSQADGRLYDA 201 P IAL+YLFGNQG+F++ + G IYGFWGILLGE FYTFPHALM+L++ LS AD RLY+A Sbjct: 140 PAIALVYLFGNQGIFRQVFGAGGIYGFWGILLGEAFYTFPHALMVLVATLSLADARLYEA 199 Query: 202 AQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKITGGAYSVLAVEAYKAV 261 A+AMGAS WR F TVTLP R G+F A CLV TL ITDFGVPK+ GG Y VLA+EAYKAV Sbjct: 200 ARAMGASPWRTFCTVTLPGARQGLFAAACLVLTLVITDFGVPKVVGGGYPVLALEAYKAV 259 Query: 262 VGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETYVPQPDWRRDGANLLA 321 VGQQ+F GALIG+LLL+PALLTF +D +QRRQRA MSSR++ YVP+PD RD LL Sbjct: 260 VGQQKFDTGALIGMLLLLPALLTFGVDMAMQRRQRAQMSSRAQVYVPRPDRVRDAICLLM 319 Query: 322 VALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGWLAYWNSLRLACGTSV 381 VA +++A+L ++ A+GASLVKLWPYNLQLTL HYDFDNMDGGGWLAY NSL+L+ T++ Sbjct: 320 VAAVSAALLTVLATAVGASLVKLWPYNLQLTLGHYDFDNMDGGGWLAYRNSLKLSLMTAI 379 Query: 382 AGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGSLLFFNHPANPFNFLY 441 AG +IF GAWL E+TRG AWL +LR LPMAVPGLVLGLG + FFN P NP + LY Sbjct: 380 AGAAIIFLGAWLTERTRGPAWLHAVLRGGFLLPMAVPGLVLGLGYVFFFNAPDNPLHGLY 439 Query: 442 GTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLLKTFIRVTVPLCLPQL 501 GTM LLVLC V HFYTT LTA AL+QLD EFEAA+LSL V L T RVTVP+CLP + Sbjct: 440 GTMALLVLCNVAHFYTTGHLTAAAALRQLDTEFEAAALSLGVAPLVTCWRVTVPICLPAI 499 Query: 502 LEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPAAAMSTLILLTSAAAS 561 L+IFRYLFVSSMTTVSAVIFLY DTVLA+++VLNMDDAGD PAAAMSTLILLT+ A+ Sbjct: 500 LDIFRYLFVSSMTTVSAVIFLYSSDTVLAAISVLNMDDAGDTAPAAAMSTLILLTAIVAA 559 Query: 562 LLMHLGGRRWLARAQAWRR 580 LL+H WL R QAWRR Sbjct: 560 LLLHAASAGWLRRTQAWRR 578 >ref|YP_728281.1| ABC transporter permease [Ralstonia eutropha H16] emb|CAJ94916.1| ABC-type transporter, duplicated permease domains [Ralstonia eutropha H16] Length = 575 Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/577 (64%), Positives = 431/577 (74%), Gaps = 4/577 (0%) Query: 7 MPATVSAPLPTLSAETSTSTRPASVPDR-SQWLPGLLKWLLLMLLALGLVGPLLFILAQA 65 M V+A LP A + S R + R + P +KWL L LA+GL+ PLL + QA Sbjct: 1 MMRAVTAVLP--EATQAASPRGTGLASRLAHGAPTAMKWLWLAGLAVGLLLPLLALFRQA 58 Query: 66 VLTPAGEWAGSRPFAQLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIPGK 125 AG+WA A L + NFLPMLGRS+ VS A + VPLA+ FAYALQR+CI + Sbjct: 59 WFDAAGQWALGARMAALVTSSNFLPMLGRSVAVSLAVVALVVPLAFGFAYALQRSCIALR 118 Query: 126 GLWRGIGLLPLLAPSLLPGIALIYLFGNQGLFK-EWMDGSIYGFWGILLGEVFYTFPHAL 184 LWRGI LLPL APSLLP IAL+YLFGNQG+F+ + G IYGFWGI+LGE FYTFPHAL Sbjct: 119 PLWRGIALLPLFAPSLLPAIALVYLFGNQGIFRGAFGQGGIYGFWGIVLGEAFYTFPHAL 178 Query: 185 MILLSALSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPK 244 M+L++ LS AD RLY+AA+AMGAS WR F TVTLP R G+F A CLV TL ITDFGVPK Sbjct: 179 MVLVATLSLADARLYEAARAMGASPWRTFCTVTLPGARQGLFAAACLVLTLVITDFGVPK 238 Query: 245 ITGGAYSVLAVEAYKAVVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSE 304 + GG Y VLA+EAYKAVVGQQQF RGALIG+LLL PALLTF +D +Q+RQR M SR++ Sbjct: 239 VVGGGYPVLALEAYKAVVGQQQFDRGALIGMLLLAPALLTFAVDMAMQQRQRTQMGSRAQ 298 Query: 305 TYVPQPDWRRDGANLLAVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGG 364 YVP P+ RDGA LL VAL+++A+L +I A+GASLVKLWPYNL LTL HYDFDNMDGG Sbjct: 299 VYVPAPERGRDGACLLLVALVSAALLAVIATALGASLVKLWPYNLGLTLAHYDFDNMDGG 358 Query: 365 GWLAYWNSLRLACGTSVAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGL 424 GWLAY NSL+L+ T++AGT IF GAWL +TRG AWL +LR LPMAVPGLVLGL Sbjct: 359 GWLAYRNSLKLSALTALAGTAAIFLGAWLTLRTRGPAWLHGVLRAGFLLPMAVPGLVLGL 418 Query: 425 GSLLFFNHPANPFNFLYGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVP 484 G + FFN P NP + LYGTM LLVLC V H YTT LTA AL+QLD EFEAA+LSL V Sbjct: 419 GYVFFFNAPGNPLHALYGTMALLVLCNVAHCYTTGHLTAAAALRQLDNEFEAAALSLGVA 478 Query: 485 LLKTFIRVTVPLCLPQLLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVG 544 L T RVTVP+CLP LL+IFRYLFVSSMTTVSAVIFLY PDTVLA+++VLNMDDAGD Sbjct: 479 PLVTCWRVTVPVCLPALLDIFRYLFVSSMTTVSAVIFLYSPDTVLAAISVLNMDDAGDTA 538 Query: 545 PAAAMSTLILLTSAAASLLMHLGGRRWLARAQAWRRG 581 PAAAMSTLILLTS A+LL+H WL RAQ WR G Sbjct: 539 PAAAMSTLILLTSVLAALLLHAVSAGWLRRAQRWRAG 575 >ref|YP_004680321.1| ABC transporter permease [Cupriavidus necator N-1] gb|AEI79089.1| ABC transport system permease protein [Cupriavidus necator N-1] Length = 576 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/582 (63%), Positives = 432/582 (74%), Gaps = 8/582 (1%) Query: 1 MRAEMTMPATVSAPLPTLSAETSTSTRPASVPDRSQWLPGLLKWLLLMLLALGLVGPLLF 60 MRA T+ + P A +S T AS + P +KW+ L LA+GL+ PLL Sbjct: 2 MRAAATVESH-----PGTQAASSRGTGLAS--RLAHGAPAAMKWIWLAGLAVGLLLPLLA 54 Query: 61 ILAQAVLTPAGEWAGSRPFAQLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRT 120 + QA AG+WA A L + NFLPMLGRS+ VS A + VPLA+ FAYALQR+ Sbjct: 55 LFRQAWFDAAGQWALGARMAALVTSPNFLPMLGRSVAVSLAVVALVVPLAFGFAYALQRS 114 Query: 121 CIPGKGLWRGIGLLPLLAPSLLPGIALIYLFGNQGLFK-EWMDGSIYGFWGILLGEVFYT 179 CI + LWRGI LLPL APSLLP IAL+YLFGNQG+F+ + G IYGFWGI+LGE FYT Sbjct: 115 CIALRPLWRGIALLPLFAPSLLPAIALVYLFGNQGIFRGAFGQGGIYGFWGIVLGEAFYT 174 Query: 180 FPHALMILLSALSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITD 239 FPHALM+L++ LS AD RLY+AA+AMGAS WR F TVTLP R G+F A CLV TL ITD Sbjct: 175 FPHALMVLVATLSLADARLYEAARAMGASPWRTFCTVTLPGARQGLFAAACLVLTLVITD 234 Query: 240 FGVPKITGGAYSVLAVEAYKAVVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASM 299 FGVPK+ GG Y VLA+EAYK+VVGQQQF RGALIG+LLL PALLTF +D +Q+RQR M Sbjct: 235 FGVPKVVGGGYPVLALEAYKSVVGQQQFDRGALIGMLLLAPALLTFAVDMAMQQRQRTQM 294 Query: 300 SSRSETYVPQPDWRRDGANLLAVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFD 359 SR++ YVP P+ RDGA LL VAL+++A+L +I A+GASLVKLWPYNL LTL HYDFD Sbjct: 295 GSRAQVYVPAPERGRDGACLLLVALVSAALLAVIATAVGASLVKLWPYNLGLTLAHYDFD 354 Query: 360 NMDGGGWLAYWNSLRLACGTSVAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPG 419 NMDGGGWLAY NSL+L+ T++AGT IF GAWL +TRG AWL +LR LPMAVPG Sbjct: 355 NMDGGGWLAYRNSLKLSALTALAGTAAIFLGAWLTLRTRGPAWLHGVLRASFLLPMAVPG 414 Query: 420 LVLGLGSLLFFNHPANPFNFLYGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASL 479 LVLGLG + FFN P NP + LYGTM LLVLC V H YTT LTA AL+QLD EFEAA+L Sbjct: 415 LVLGLGYVFFFNAPGNPLHALYGTMALLVLCNVAHCYTTGHLTAAAALRQLDNEFEAAAL 474 Query: 480 SLKVPLLKTFIRVTVPLCLPQLLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDD 539 SL V L T RVTVP+CLP LL+IFRYLFVSSMTTVSAVIFLY PDTVLA+++VLNMDD Sbjct: 475 SLGVAPLVTCWRVTVPVCLPALLDIFRYLFVSSMTTVSAVIFLYSPDTVLAAISVLNMDD 534 Query: 540 AGDVGPAAAMSTLILLTSAAASLLMHLGGRRWLARAQAWRRG 581 AGD PAAAMSTLILLTS A+LL+H WL RAQ WR G Sbjct: 535 AGDTAPAAAMSTLILLTSVLAALLLHAVSAGWLRRAQRWRAG 576 >ref|ZP_03839287.1| ABC superfamily ATP binding cassette transporter permease protein [Proteus mirabilis ATCC 29906] gb|EEI49861.1| ABC superfamily ATP binding cassette transporter permease protein [Proteus mirabilis ATCC 29906] Length = 563 Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust. Identities = 321/504 (63%), Positives = 401/504 (79%), Gaps = 1/504 (0%) Query: 81 QLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIPGKGLWRGIGLLPLLAPS 140 LF + NFL ++G S+ VS + AV+TVPLAY+FAYAL RT IP K LWRGI LLPLLAPS Sbjct: 60 DLFTSANFLWLVGNSISVSLSVAVITVPLAYLFAYALHRTLIPFKSLWRGISLLPLLAPS 119 Query: 141 LLPGIALIYLFGNQGLFKEWMDGSIYGFWGILLGEVFYTFPHALMILLSALSQADGRLYD 200 +LPGIAL+YLFGNQGL + + SIYG+WG++LGEV YTFPHALMILLSALS +D RL+D Sbjct: 120 MLPGIALVYLFGNQGLLRSLLTESIYGYWGLVLGEVIYTFPHALMILLSALSMSDARLFD 179 Query: 201 AAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKITGGAYSVLAVEAYKA 260 AA ++GAS WR F +VT ++R+GIF ALCLVFTLTITDFG+P + GG Y VLA+EAYKA Sbjct: 180 AASSLGASSWRTFRSVTWSSSRHGIFAALCLVFTLTITDFGIPVVVGGDYQVLALEAYKA 239 Query: 261 VVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETYVPQPDWRRDGANLL 320 V+GQQQFGRGALIG+LLL+PALLTF +D WL++RQR +MSSR++ Y+P+ +++RD L+ Sbjct: 240 VLGQQQFGRGALIGMLLLLPALLTFGVDVWLRKRQRDAMSSRAQFYLPKANFQRDTLYLI 299 Query: 321 AVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGWLAYWNSLRLACGTS 380 V LI + L++ A+ +S ++ WPYNL +L+HY+F+ + GGWLAY NS+ LA T+ Sbjct: 300 FVMLICALFLLVFGTAVYSSFIQFWPYNLSFSLRHYNFEGLP-GGWLAYTNSIILAFYTA 358 Query: 381 VAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGSLLFFNHPANPFNFL 440 G LIF GA+L+EKT +WL+ LLRML F+PMAVPGLVLGLG + FFN P NP NFL Sbjct: 359 TIGCFLIFMGAYLIEKTASHSWLNNLLRMLSFVPMAVPGLVLGLGYVFFFNLPNNPLNFL 418 Query: 441 YGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLLKTFIRVTVPLCLPQ 500 YG+M LLVLC + HF+TTA +TA TAL+QLD EFEAASLSLK PL + F R+T+PLCLP Sbjct: 419 YGSMVLLVLCSIAHFFTTAYMTASTALRQLDKEFEAASLSLKAPLYRHFWRITIPLCLPA 478 Query: 501 LLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPAAAMSTLILLTSAAA 560 LL+I+RYLFVS+MTTVSA IFLY PDT+LA+VAVLNMDDAG++G AAAMSTLIL TSA Sbjct: 479 LLDIYRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNIGGAAAMSTLILTTSAGV 538 Query: 561 SLLMHLGGRRWLARAQAWRRGRAH 584 S+L+ + + L R QAW + A Sbjct: 539 SILLSIASQGVLRRTQAWHQREAK 562 >ref|YP_002152765.1| ABC transporter permease [Proteus mirabilis HI4320] emb|CAR46033.1| ABC transporter permease protein [Proteus mirabilis HI4320] Length = 563 Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust. Identities = 321/504 (63%), Positives = 401/504 (79%), Gaps = 1/504 (0%) Query: 81 QLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIPGKGLWRGIGLLPLLAPS 140 LF + NFL ++G S+ VS + AV+TVPLAY+FAYAL RT IP K LWRGI LLPLLAPS Sbjct: 60 DLFTSANFLWLVGNSISVSLSVAVITVPLAYLFAYALHRTLIPFKSLWRGISLLPLLAPS 119 Query: 141 LLPGIALIYLFGNQGLFKEWMDGSIYGFWGILLGEVFYTFPHALMILLSALSQADGRLYD 200 +LPGIAL+YLFGNQGL + + SIYG+WG++LGEV YTFPHALMILLSALS +D RL+D Sbjct: 120 MLPGIALVYLFGNQGLLRSLLTESIYGYWGLVLGEVIYTFPHALMILLSALSMSDARLFD 179 Query: 201 AAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKITGGAYSVLAVEAYKA 260 AA ++GAS WR F +VT ++R+GIF ALCLVFTLTITDFG+P + GG Y VLA+EAYKA Sbjct: 180 AASSLGASSWRTFRSVTWSSSRHGIFAALCLVFTLTITDFGIPVVVGGDYQVLALEAYKA 239 Query: 261 VVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETYVPQPDWRRDGANLL 320 V+GQQQFGRGALIG+LLL+PALLTF +D WL++RQR +MSSR++ Y+P+ +++RD L+ Sbjct: 240 VLGQQQFGRGALIGMLLLLPALLTFGVDVWLRKRQRDAMSSRAQFYLPKANFQRDTLYLI 299 Query: 321 AVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGWLAYWNSLRLACGTS 380 V LI + L++ A+ +S ++ WPYNL +L+HY+F+ + GGWLAY NS+ LA T+ Sbjct: 300 FVMLICALFLLVFGTAVYSSFIQFWPYNLSFSLRHYNFEGLP-GGWLAYTNSIILAFYTA 358 Query: 381 VAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGSLLFFNHPANPFNFL 440 G LIF GA+L+EKT +WL+ LLRML F+PMAVPGLVLGLG + FFN P NP NFL Sbjct: 359 TIGCFLIFMGAYLIEKTASHSWLNNLLRMLSFVPMAVPGLVLGLGYVFFFNLPNNPLNFL 418 Query: 441 YGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLLKTFIRVTVPLCLPQ 500 YG+M LLVLC + HF+TTA +TA TAL+QLD EFEAASLSLK PL + F R+T+PLCLP Sbjct: 419 YGSMVLLVLCSIAHFFTTAYMTASTALRQLDKEFEAASLSLKAPLYRHFWRITIPLCLPA 478 Query: 501 LLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPAAAMSTLILLTSAAA 560 LL+I+RYLFVS+MTTVSA IFLY PDT+LA+VAVLNMDDAG++G AAAMSTLIL TSA Sbjct: 479 LLDIYRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNIGGAAAMSTLILTTSAGV 538 Query: 561 SLLMHLGGRRWLARAQAWRRGRAH 584 S+L+ + + L R QAW + A Sbjct: 539 SILLSIASQGVLRRTQAWHQREAK 562 >ref|ZP_03802499.1| hypothetical protein PROPEN_00841 [Proteus penneri ATCC 35198] gb|EEG87172.1| hypothetical protein PROPEN_00841 [Proteus penneri ATCC 35198] Length = 563 Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust. Identities = 319/504 (63%), Positives = 403/504 (79%), Gaps = 1/504 (0%) Query: 81 QLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIPGKGLWRGIGLLPLLAPS 140 LF + +FL ++G S+ VS + AV+TVPLAY+FAYAL RT IP K WRGI LLPLLAPS Sbjct: 60 NLFTSAHFLWLVGNSISVSLSVAVITVPLAYLFAYALHRTLIPFKSWWRGISLLPLLAPS 119 Query: 141 LLPGIALIYLFGNQGLFKEWMDGSIYGFWGILLGEVFYTFPHALMILLSALSQADGRLYD 200 +LPGIAL+YLFGNQGL + + SIYG+WG++ GEV YTFPHALMILLSALS +D RL+D Sbjct: 120 MLPGIALVYLFGNQGLLRSLLPDSIYGYWGLVFGEVIYTFPHALMILLSALSMSDARLFD 179 Query: 201 AAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKITGGAYSVLAVEAYKA 260 AA ++GAS WR F +VT ++R+GIF ALCLVFTLTITDFG+P + GG Y VLA+EAYKA Sbjct: 180 AASSLGASSWRTFRSVTWSSSRHGIFAALCLVFTLTITDFGIPVVVGGDYQVLALEAYKA 239 Query: 261 VVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETYVPQPDWRRDGANLL 320 V+GQQQFGRGALIG+LLL+PALLTF++D WL++RQR +MSSR++ Y+P+ +++RD L+ Sbjct: 240 VLGQQQFGRGALIGMLLLLPALLTFSVDVWLRKRQRDAMSSRAQLYLPKANFQRDTLYLI 299 Query: 321 AVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGWLAYWNSLRLACGTS 380 V LI + L++ A+ +S ++ WPYNL +L+HY+F+ + GGWLAY NS+ LA T+ Sbjct: 300 FVMLICALFLLVFGTAVYSSFIQFWPYNLSFSLRHYNFEGLP-GGWLAYTNSIILAFFTA 358 Query: 381 VAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGSLLFFNHPANPFNFL 440 G+LLIF GA+L+EKT +WL+ LLRML F+PMAVPGLVLGLG + FFN P NP NFL Sbjct: 359 TIGSLLIFMGAYLIEKTASHSWLNNLLRMLSFVPMAVPGLVLGLGYVFFFNLPNNPLNFL 418 Query: 441 YGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLLKTFIRVTVPLCLPQ 500 YG+MTLLVLC + HF+TTA +TA TAL+QLD EFEAASLSLK PL + F R+T+PLCLP Sbjct: 419 YGSMTLLVLCSIAHFFTTAYMTANTALRQLDKEFEAASLSLKAPLYRHFWRITIPLCLPA 478 Query: 501 LLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPAAAMSTLILLTSAAA 560 LL+I+RYLFVS+MTTVSA IFLY PDT+LA+VAVLNMDDAG++G AAAMSTLIL TSA Sbjct: 479 LLDIYRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNIGGAAAMSTLILTTSAGV 538 Query: 561 SLLMHLGGRRWLARAQAWRRGRAH 584 S+L+ + + + R QAW + A Sbjct: 539 SILLSIASKGVIRRTQAWHQREAK 562 >ref|YP_351096.1| binding-protein dependent transport system inner membrane protein [Pseudomonas fluorescens Pf0-1] gb|ABA77105.1| putative cation ABC transport system, membrane protein [Pseudomonas fluorescens Pf0-1] Length = 574 Score = 635 bits (1638), Expect = e-180, Method: Compositional matrix adjust. Identities = 328/513 (63%), Positives = 403/513 (78%) Query: 68 TPAGEWAGSRPFAQLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIPGKGL 127 + AG+ G +L + NF +LG SL VS + A + VPLAY+FAYALQRT IPGKGL Sbjct: 57 SEAGQGGGWLAAKELVTSDNFHWLLGNSLKVSLSVAAIVVPLAYLFAYALQRTLIPGKGL 116 Query: 128 WRGIGLLPLLAPSLLPGIALIYLFGNQGLFKEWMDGSIYGFWGILLGEVFYTFPHALMIL 187 WRGI LLPL+APS+LPGIAL+YLFGNQG+ + + +IYGFWGI+LGEV YTFPHALMIL Sbjct: 117 WRGISLLPLMAPSMLPGIALVYLFGNQGMLRGLLSDNIYGFWGIVLGEVIYTFPHALMIL 176 Query: 188 LSALSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKITG 247 LSALS AD RL+DAA +MGAS + F ++T PATR +F A CLVFTLTITDFGVP + G Sbjct: 177 LSALSLADARLFDAASSMGASPAKAFRSITWPATRQAVFAAFCLVFTLTITDFGVPVVVG 236 Query: 248 GAYSVLAVEAYKAVVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETYV 307 G Y VLA+EAYKAVVGQQQFGRGALIG++LL+PAL +F +DAWL+RR +MS R++ + Sbjct: 237 GDYQVLALEAYKAVVGQQQFGRGALIGMVLLLPALFSFGVDAWLRRRHGDAMSGRAQVFK 296 Query: 308 PQPDWRRDGANLLAVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGWL 367 P P +RD L V LI++A+L++ +A+ +SLVK WPYNL L+L HY F+ GGG L Sbjct: 297 PAPSRKRDAFYLSVVLLISAALLLVFGMAVFSSLVKFWPYNLSLSLNHYQFNETAGGGLL 356 Query: 368 AYWNSLRLACGTSVAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGSL 427 AY NSL++A GT++ G++LIF GA+LMEKTR Q L+ LRML F+PMAVPGLVLGLG + Sbjct: 357 AYGNSLKMALGTALIGSVLIFTGAYLMEKTRSQRGLNLTLRMLSFVPMAVPGLVLGLGYV 416 Query: 428 LFFNHPANPFNFLYGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLLK 487 FFN NP + LYGTMTLL++C + H+ TTAQ+TA TAL+QLD EFEAA+LSLKVPL + Sbjct: 417 FFFNLTGNPLHVLYGTMTLLIVCTIAHYLTTAQMTATTALRQLDAEFEAAALSLKVPLYR 476 Query: 488 TFIRVTVPLCLPQLLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPAA 547 ++RVTVP+CLP LL+I RYLFVS+MTTVSA IFLY PDT+LA+VAVLNMDDAG+VG AA Sbjct: 477 HYLRVTVPICLPALLDIVRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNVGGAA 536 Query: 548 AMSTLILLTSAAASLLMHLGGRRWLARAQAWRR 580 AMSTLIL TSA SLL+ R L R+QAWR+ Sbjct: 537 AMSTLILFTSAGVSLLLAWASRGLLRRSQAWRQ 569 >ref|YP_001796543.1| ABC transporter, inner membrane component [Cupriavidus taiwanensis LMG 19424] emb|CAP63304.1| putative ABC transporter, inner membrane component [Cupriavidus taiwanensis LMG 19424] Length = 574 Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust. Identities = 346/519 (66%), Positives = 398/519 (76%), Gaps = 1/519 (0%) Query: 64 QAVLTPAGEWAGSRPFAQLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIP 123 QA AG+W A L + NFLPMLGRS+ VS + VPLA+ FAYALQR+CI Sbjct: 56 QAWFDGAGQWVLGARMAALVSGPNFLPMLGRSVAVSLTVVALVVPLAFGFAYALQRSCIA 115 Query: 124 GKGLWRGIGLLPLLAPSLLPGIALIYLFGNQGLFKE-WMDGSIYGFWGILLGEVFYTFPH 182 + LWRGI LLPL APSLLP IAL+YLFGNQG+F+ + G IYGFWGI+LGE FYTFPH Sbjct: 116 LRPLWRGIALLPLFAPSLLPAIALVYLFGNQGIFRGVFGPGGIYGFWGIVLGEAFYTFPH 175 Query: 183 ALMILLSALSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGV 242 ALM+L++ LS AD RLY+AA+AMGA WR F TVTLP R G+F A CLV TL ITDFGV Sbjct: 176 ALMVLVATLSLADARLYEAARAMGAGPWRTFRTVTLPGARQGLFAAACLVLTLVITDFGV 235 Query: 243 PKITGGAYSVLAVEAYKAVVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSR 302 PK+ GG Y VLA+EAYKAVVGQQQF RGALIG+LLL PALLTF +D LQRRQR + SR Sbjct: 236 PKVVGGGYPVLALEAYKAVVGQQQFDRGALIGMLLLAPALLTFAVDMALQRRQRTQLGSR 295 Query: 303 SETYVPQPDWRRDGANLLAVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMD 362 ++ YVP P+ RDGA LL V +++A+L ++ A+GASLVKLWPYNL LTL HYDFDNMD Sbjct: 296 AQVYVPAPERGRDGACLLLVLAVSAALLAVVATAVGASLVKLWPYNLGLTLAHYDFDNMD 355 Query: 363 GGGWLAYWNSLRLACGTSVAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVL 422 GGGWLAY NSL+L+ T++AGT+ IF GAWL +TRG AWL +LR LPMAVPGLVL Sbjct: 356 GGGWLAYRNSLKLSVLTALAGTVAIFLGAWLTLRTRGPAWLHGVLRAGFLLPMAVPGLVL 415 Query: 423 GLGSLLFFNHPANPFNFLYGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLK 482 GLG + FFN P NP + LYGTM LLVLC V H YTT LTA AL+QLD EFEAA+LSL Sbjct: 416 GLGYVFFFNAPGNPLHPLYGTMALLVLCNVAHGYTTGHLTAAAALRQLDQEFEAAALSLG 475 Query: 483 VPLLKTFIRVTVPLCLPQLLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGD 542 V L T RVTVP+CLP LL+IFRYLFVSSMTTVSAVIFLY PDTVLA+++VLNMDDAGD Sbjct: 476 VAPLLTCWRVTVPVCLPALLDIFRYLFVSSMTTVSAVIFLYSPDTVLAAISVLNMDDAGD 535 Query: 543 VGPAAAMSTLILLTSAAASLLMHLGGRRWLARAQAWRRG 581 PAAAMSTLILLT+ A+LL+H WL RAQ WR G Sbjct: 536 TAPAAAMSTLILLTAVLAALLLHALSAGWLRRAQRWRAG 574 >ref|YP_262947.1| putative 2-aminoethylphosphonate ABC transporter permease [Pseudomonas fluorescens Pf-5] gb|AAY95079.1| putative 2-aminoethylphosphonate ABC transporter, permease protein [Pseudomonas fluorescens Pf-5] Length = 574 Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust. Identities = 329/511 (64%), Positives = 401/511 (78%), Gaps = 3/511 (0%) Query: 71 GEWAGSRPFAQLFANINFLPMLGRSLWVSAATAVVTVPLAYVFAYALQRTCIPGKGLWRG 130 G W +R +L A+ NF +LG SL VS + A + VPLAY+FAYALQRT IPGKG+WRG Sbjct: 63 GGWLAAR---ELVASENFHWLLGNSLKVSLSVAAIVVPLAYLFAYALQRTLIPGKGIWRG 119 Query: 131 IGLLPLLAPSLLPGIALIYLFGNQGLFKEWMDGSIYGFWGILLGEVFYTFPHALMILLSA 190 + LLPL+APS+LPGIAL+YLFGNQG+ + +IYGFWGI+LGEV YTFPHALMILLSA Sbjct: 120 LSLLPLMAPSMLPGIALVYLFGNQGMLRGLFAENIYGFWGIVLGEVIYTFPHALMILLSA 179 Query: 191 LSQADGRLYDAAQAMGASRWRIFTTVTLPATRYGIFGALCLVFTLTITDFGVPKITGGAY 250 LS AD RL+DAA +MGAS + F ++T PATR +F A CLVFTLTITDFGVP + GG Y Sbjct: 180 LSLADARLFDAASSMGASPAKAFRSITWPATRQAVFAAFCLVFTLTITDFGVPVVVGGDY 239 Query: 251 SVLAVEAYKAVVGQQQFGRGALIGLLLLVPALLTFTLDAWLQRRQRASMSSRSETYVPQP 310 VLA+EAYKAVVGQQQFGRGALIG++LL+PAL +F +DAWL+RR SMS R++ + P P Sbjct: 240 QVLALEAYKAVVGQQQFGRGALIGMVLLLPALFSFGVDAWLRRRHGDSMSGRAQVFKPAP 299 Query: 311 DWRRDGANLLAVALIASAILMMIVVAMGASLVKLWPYNLQLTLQHYDFDNMDGGGWLAYW 370 RDG L V LI +A+L++ +A+ +SLVK WPYNL L+L HY F++ GGGWLAY Sbjct: 300 SRLRDGCYLAIVLLICAALLLVFGMAVFSSLVKFWPYNLSLSLNHYQFNDTAGGGWLAYR 359 Query: 371 NSLRLACGTSVAGTLLIFCGAWLMEKTRGQAWLSTLLRMLCFLPMAVPGLVLGLGSLLFF 430 NSL +A T++ G+++IF GA+LMEKTRGQ L+ LRML F+PMAVPGLVLGLG + FF Sbjct: 360 NSLTMALCTALIGSVVIFTGAYLMEKTRGQRGLNLALRMLSFVPMAVPGLVLGLGYVFFF 419 Query: 431 NHPANPFNFLYGTMTLLVLCCVVHFYTTAQLTAVTALKQLDPEFEAASLSLKVPLLKTFI 490 N NP + YGTMTLLV+C + H+ TTAQ+TA TAL+QLD EFEAA+LSLK PL + ++ Sbjct: 420 NLNGNPLHVFYGTMTLLVVCTIAHYLTTAQMTATTALRQLDAEFEAAALSLKAPLYRHYL 479 Query: 491 RVTVPLCLPQLLEIFRYLFVSSMTTVSAVIFLYRPDTVLASVAVLNMDDAGDVGPAAAMS 550 RVTVP+CLP LL+I RYLFVS+MTTVSA IFLY PDT+LA+VAVLNMDDAG+VG AAAMS Sbjct: 480 RVTVPICLPALLDIVRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNVGGAAAMS 539 Query: 551 TLILLTSAAASLLMHLGGRRWLARAQAWRRG 581 TLIL TSA SLL+ R L R+QAWR+G Sbjct: 540 TLILFTSAGVSLLLAWASRGLLRRSQAWRQG 570