BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0052.p (175 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775640.1| hypothetical protein Hsero_2233 [Herbaspiril... 356 6e-97 ref|YP_001355268.1| hypothetical protein mma_3578 [Janthinobacte... 177 8e-43 ref|YP_001101580.1| hypothetical protein HEAR3356 [Herminiimonas... 167 6e-40 ref|YP_004754940.1| hypothetical protein CFU_4296 [Collimonas fu... 152 2e-35 ref|ZP_08275159.1| hypothetical protein IMCC9480_10 [Oxalobacter... 150 5e-35 ref|YP_002232129.1| putative lipoprotein [Burkholderia cenocepac... 119 2e-25 ref|YP_001764251.1| TonB family protein [Burkholderia cenocepaci... 110 7e-23 ref|ZP_02904765.1| TonB family protein [Burkholderia ambifaria M... 110 1e-22 ref|YP_620398.1| TonB-like [Burkholderia cenocepacia AU 1054] >g... 109 1e-22 ref|ZP_04939370.1| hypothetical protein BCPG_00776 [Burkholderia... 109 2e-22 >ref|YP_003775640.1| hypothetical protein Hsero_2233 [Herbaspirillum seropedicae SmR1] gb|ADJ63732.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 175 Score = 356 bits (914), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 175/175 (100%), Positives = 175/175 (100%) Query: 1 MTRFSGLGRSKGARRLLASGIGVAALLAACSSPESSKEDRDALARQLIEQKKTTSDGTST 60 MTRFSGLGRSKGARRLLASGIGVAALLAACSSPESSKEDRDALARQLIEQKKTTSDGTST Sbjct: 1 MTRFSGLGRSKGARRLLASGIGVAALLAACSSPESSKEDRDALARQLIEQKKTTSDGTST 60 Query: 61 ATTVDGYKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDR 120 ATTVDGYKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDR Sbjct: 61 ATTVDGYKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDR 120 Query: 121 HAEASAMGSLKSAAPFPKPPAALLKHNRIELSESWLFNNDGRFQLRSVALAQMGE 175 HAEASAMGSLKSAAPFPKPPAALLKHNRIELSESWLFNNDGRFQLRSVALAQMGE Sbjct: 121 HAEASAMGSLKSAAPFPKPPAALLKHNRIELSESWLFNNDGRFQLRSVALAQMGE 175 >ref|YP_001355268.1| hypothetical protein mma_3578 [Janthinobacterium sp. Marseille] gb|ABR90978.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 152 Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 85/155 (54%), Positives = 115/155 (74%), Gaps = 13/155 (8%) Query: 22 GVAALLAACSSPESSKEDRDALARQLIEQK-KTTSDGTSTATTVDGYKVDLAKRISQVNF 80 VA LLA C AR L+++ +TT DGTSTA ++ Y+ LA RI+QVN Sbjct: 10 AVALLLAGCG------------ARTLLDKPAETTPDGTSTADSISEYQFALAHRIAQVNS 57 Query: 81 TSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDRHAEASAMGSLKSAAPFPKPP 140 T VY+ RPQALLRSV+V+KYV+DA+G+L+ SEI+RSNRDR E++A+ S+++ APFPKP Sbjct: 58 TKVYIGRPQALLRSVVVVKYVIDANGSLLRSEIMRSNRDRTTESTALASVRNTAPFPKPA 117 Query: 141 AALLKHNRIELSESWLFNNDGRFQLRSVALAQMGE 175 ++LL+H R+E+ E+WLFNNDGRFQLR++A QM E Sbjct: 118 SSLLRHGRVEVIETWLFNNDGRFQLRTIAEPQMNE 152 >ref|YP_001101580.1| hypothetical protein HEAR3356 [Herminiimonas arsenicoxydans] emb|CAL63459.1| Hypothetical protein; putative TonB domain [Herminiimonas arsenicoxydans] Length = 152 Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 86/124 (69%), Positives = 104/124 (83%) Query: 52 KTTSDGTSTATTVDGYKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTS 111 +TT DGTSTA TV YK+ LA+RI+QVN T VY+ RPQALLRSV+V+KYVVDA G+L+ S Sbjct: 29 ETTGDGTSTADTVGEYKLALAQRIAQVNSTKVYIGRPQALLRSVVVVKYVVDAKGSLLRS 88 Query: 112 EILRSNRDRHAEASAMGSLKSAAPFPKPPAALLKHNRIELSESWLFNNDGRFQLRSVALA 171 EI+RSNRDR EA+A+ SL+S APFPKP A+LL+H RIEL E+WLFNNDGRFQLR++A Sbjct: 89 EIMRSNRDRSTEATALASLRSTAPFPKPAASLLRHGRIELMETWLFNNDGRFQLRTIAEP 148 Query: 172 QMGE 175 QM E Sbjct: 149 QMDE 152 >ref|YP_004754940.1| hypothetical protein CFU_4296 [Collimonas fungivorans Ter331] gb|AEK64117.1| hypothetical protein CFU_4296 [Collimonas fungivorans Ter331] Length = 156 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/123 (63%), Positives = 97/123 (78%) Query: 53 TTSDGTSTATTVDGYKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSE 112 TT D TSTA T+D YK LA+RI VN T VYV RPQALLR+VIV+KY V+ADG L+ ++ Sbjct: 34 TTPDATSTAATLDDYKRALAQRIVAVNSTQVYVGRPQALLRAVIVLKYFVNADGQLLRAD 93 Query: 113 ILRSNRDRHAEASAMGSLKSAAPFPKPPAALLKHNRIELSESWLFNNDGRFQLRSVALAQ 172 +LR+NRDR AEA+A+ +L+ AAPFPKP + L+ +EL+ESWLFN+DGRFQLRSVA Q Sbjct: 94 VLRTNRDRKAEATALAALRRAAPFPKPDSRFLRRGEVELAESWLFNDDGRFQLRSVAEQQ 153 Query: 173 MGE 175 M E Sbjct: 154 MDE 156 >ref|ZP_08275159.1| hypothetical protein IMCC9480_10 [Oxalobacteraceae bacterium IMCC9480] gb|EGF31371.1| hypothetical protein IMCC9480_10 [Oxalobacteraceae bacterium IMCC9480] Length = 155 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 76/153 (49%), Positives = 102/153 (66%), Gaps = 9/153 (5%) Query: 23 VAALLAACSSPESSKEDRDALARQLIEQKKTTSDGTSTATTVDGYKVDLAKRISQVNFTS 82 ++A+LAAC+ S D L + + + TT++GYK LA+RIS N + Sbjct: 12 LSAVLAACTPGRSPAPRSDTLGQPAVP---------VSVTTLEGYKEALAQRISNANASL 62 Query: 83 VYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDRHAEASAMGSLKSAAPFPKPPAA 142 VY +PQA LRSV+V+K+ VDA G L+ S+I+RSN D EA+A+ SL+S+APFP+P Sbjct: 63 VYGGQPQAHLRSVVVVKFTVDASGKLLHSDIIRSNHDSTTEATALASLRSSAPFPRPAGT 122 Query: 143 LLKHNRIELSESWLFNNDGRFQLRSVALAQMGE 175 LLK R+ELSE+WLFN DGRFQLRS+A QM E Sbjct: 123 LLKRGRLELSETWLFNTDGRFQLRSIAAPQMAE 155 >ref|YP_002232129.1| putative lipoprotein [Burkholderia cenocepacia J2315] emb|CAR53341.1| putative lipoprotein [Burkholderia cenocepacia J2315] Length = 163 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 98/160 (61%), Gaps = 14/160 (8%) Query: 15 RLLASGIGVAALLAACS-SPESSKEDRDALARQLIEQKKTTSDGTSTATTVDGYKVDLAK 73 RL + + V ALLAAC+ +P SS R ++ T G+ +D Y+V++A Sbjct: 11 RLRVATLAVVALLAACTITPPSS-------LRSVLTIPSVTRSGS-----LDQYRVEVAH 58 Query: 74 RISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDRHAEASAMGSLKSA 133 R+++ N + + PQA+LRS++V+ + VD G +V + + RSN D AEA A+ SL+ + Sbjct: 59 RVAERNPSGMLHGTPQAMLRSLVVVAFTVDGSGRVVNASVYRSNGDSEAEALALASLRRS 118 Query: 134 APFPKPPAALLKHN-RIELSESWLFNNDGRFQLRSVALAQ 172 AP P PP+ LL N R+EL E WLFN+DG FQL+S A AQ Sbjct: 119 APLPAPPSRLLDGNGRLELMEGWLFNDDGHFQLQSTASAQ 158 >ref|YP_001764251.1| TonB family protein [Burkholderia cenocepacia MC0-3] gb|ACA90129.1| TonB family protein [Burkholderia cenocepacia MC0-3] Length = 163 Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 63 TVDGYKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDRHA 122 +D Y+V++A R+++ N + + PQA+LRS++V+ + VD G +V + + RSN D A Sbjct: 48 NLDQYRVEVAHRVAERNPSGMLHGTPQAMLRSLVVVAFTVDGSGRVVNASVYRSNGDSEA 107 Query: 123 EASAMGSLKSAAPFPKPPAALLKHN-RIELSESWLFNNDGRFQLRSVALAQ 172 EA A+ SL+ +AP P PPA LL N R+EL E WLFN+DG FQL+S A AQ Sbjct: 108 EALALASLRRSAPLPAPPARLLDGNGRLELMEGWLFNDDGHFQLQSTASAQ 158 >ref|ZP_02904765.1| TonB family protein [Burkholderia ambifaria MEX-5] gb|EDT44104.1| TonB family protein [Burkholderia ambifaria MEX-5] Length = 142 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/107 (49%), Positives = 75/107 (70%), Gaps = 1/107 (0%) Query: 67 YKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDRHAEASA 126 Y+V++A+ +++ N + V PQA+LRS++V+ + VD G LV + + RSN D AEA A Sbjct: 31 YRVEVARCVAEHNPSGVSRGTPQAMLRSLVVVAFTVDRSGRLVNASVYRSNGDSEAEALA 90 Query: 127 MGSLKSAAPFPKPPAALLKHN-RIELSESWLFNNDGRFQLRSVALAQ 172 + SL+ +AP P PP+ LL N RIE+ E WLFN+DGRFQL+S A AQ Sbjct: 91 LASLRRSAPLPAPPSKLLDGNGRIEMMEGWLFNDDGRFQLQSTASAQ 137 >ref|YP_620398.1| TonB-like [Burkholderia cenocepacia AU 1054] ref|YP_834638.1| TonB family protein [Burkholderia cenocepacia HI2424] gb|ABF75425.1| TonB-like protein [Burkholderia cenocepacia AU 1054] gb|ABK07745.1| TonB family protein [Burkholderia cenocepacia HI2424] Length = 163 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/110 (47%), Positives = 76/110 (69%), Gaps = 1/110 (0%) Query: 64 VDGYKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDRHAE 123 +D Y+V++A R+++ N + + PQA+LRS++V+ + VD G +V + + RSN D AE Sbjct: 49 LDQYRVEVAHRVAERNPSGMLHGTPQAMLRSLVVVAFTVDGSGRVVNASVYRSNGDSEAE 108 Query: 124 ASAMGSLKSAAPFPKPPAALLKHN-RIELSESWLFNNDGRFQLRSVALAQ 172 A A+ SL+ +AP P PP+ LL N R+EL E WLFN+DG FQL+S A AQ Sbjct: 109 ALALASLRRSAPLPAPPSRLLDGNGRLELMEGWLFNDDGHFQLQSTASAQ 158 >ref|ZP_04939370.1| hypothetical protein BCPG_00776 [Burkholderia cenocepacia PC184] gb|EAY62541.1| hypothetical protein BCPG_00776 [Burkholderia cenocepacia PC184] Length = 234 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/110 (47%), Positives = 76/110 (69%), Gaps = 1/110 (0%) Query: 64 VDGYKVDLAKRISQVNFTSVYVERPQALLRSVIVIKYVVDADGNLVTSEILRSNRDRHAE 123 +D Y+V++A R+++ N + + PQA+LRS++V+ + VD G +V + + RSN D AE Sbjct: 120 LDQYRVEVAHRVAERNPSGMLHGTPQAMLRSLVVVAFTVDGSGRVVNASVYRSNGDSEAE 179 Query: 124 ASAMGSLKSAAPFPKPPAALLKHN-RIELSESWLFNNDGRFQLRSVALAQ 172 A A+ SL+ +AP P PP+ LL N R+EL E WLFN+DG FQL+S A AQ Sbjct: 180 ALALASLRRSAPLPAPPSRLLDGNGRLELMEGWLFNDDGHFQLQSTASAQ 229