BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0034.p (402 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775656.1| branched-chain amino acid ABC transporter pe... 781 0.0 ref|YP_001353241.1| ABC-type branched-chain amino acid transport... 421 e-116 ref|ZP_08274986.1| inner-membrane translocator [Oxalobacteraceae... 400 e-109 ref|YP_549390.1| inner-membrane translocator [Polaromonas sp. JS... 394 e-107 ref|YP_004619121.1| branched chain amino acid ABC transporter pe... 387 e-105 ref|YP_004685377.1| ABC transporter permease [Cupriavidus necato... 384 e-104 ref|YP_295615.1| inner-membrane translocator [Ralstonia eutropha... 383 e-104 ref|YP_002005479.1| branched-chain amino acid ABC transporter [C... 380 e-103 ref|YP_726022.1| ABC-type transporter, permease component [Ralst... 379 e-103 ref|YP_004234832.1| inner-membrane translocator [Acidovorax aven... 373 e-101 >ref|YP_003775656.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63748.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 404 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/402 (100%), Positives = 402/402 (100%) Query: 1 MKRLLLPWLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAV 60 MKRLLLPWLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAV Sbjct: 3 MKRLLLPWLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAV 62 Query: 61 YSGLGAFGAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITL 120 YSGLGAFGAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITL Sbjct: 63 YSGLGAFGAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITL 122 Query: 121 GLVELVSACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIW 180 GLVELVSACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIW Sbjct: 123 GLVELVSACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIW 182 Query: 181 ALRATPLGRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAE 240 ALRATPLGRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAE Sbjct: 183 ALRATPLGRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAE 242 Query: 241 YVGALRSGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMT 300 YVGALRSGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMT Sbjct: 243 YVGALRSGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMT 302 Query: 301 APGGLASLIDQGWRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAE 360 APGGLASLIDQGWRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAE Sbjct: 303 APGGLASLIDQGWRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAE 362 Query: 361 APLRWWGWTVDVHAPLPWMTALLLMSGGVAALCCWRRQGGRS 402 APLRWWGWTVDVHAPLPWMTALLLMSGGVAALCCWRRQGGRS Sbjct: 363 APLRWWGWTVDVHAPLPWMTALLLMSGGVAALCCWRRQGGRS 404 >ref|YP_001353241.1| ABC-type branched-chain amino acid transport system permease component [Janthinobacterium sp. Marseille] gb|ABR88583.1| ABC-type branched-chain amino acid transport system permease component [Janthinobacterium sp. Marseille] Length = 424 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 240/394 (60%), Positives = 289/394 (73%), Gaps = 3/394 (0%) Query: 3 RLLLPWLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYS 62 R L W GF +L+ APL+F QSA+LSLL QMGT ++ LSYNMLLG+GGMLSFGHAVYS Sbjct: 10 RRWLIWGGFTALLVVAPLIFTQSASLSLLCQMGTFIIFALSYNMLLGQGGMLSFGHAVYS 69 Query: 63 GLGAFGAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGL 122 GLGAF AIH +N +A G L P+TL+PL GG+ G G L GY+TTR++GTTFAMITLG+ Sbjct: 70 GLGAFCAIHAINLVAAGNLHIPITLIPLVGGVAGLFFGALFGYVTTRKSGTTFAMITLGI 129 Query: 123 VELVSACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWAL 182 VELV AC LMFP FGGEGGI +RV+GE GI+YGPQIQVYYLIAGWLL+ +A++A Sbjct: 130 VELVFACSLMFPGFFGGEGGIFTDRVVGEAFFGITYGPQIQVYYLIAGWLLLSTVAMYAF 189 Query: 183 RATPLGRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAEYV 242 TPLGRI+NAVRDNPERA F+GYDPQ VRYL L+LSAFFAG+SG L+AINFEIVSAE V Sbjct: 190 TQTPLGRIINAVRDNPERAEFVGYDPQWVRYLTLMLSAFFAGISGALTAINFEIVSAENV 249 Query: 243 GALRSGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAP 302 ALRSG ILLFTFIGG+A+F+GPI+G +VGV + LS YT AWQ YLG FF+LIVM AP Sbjct: 250 SALRSGMILLFTFIGGTAFFFGPILGAIVGVFLTVVLSNYTNAWQLYLGVFFVLIVMLAP 309 Query: 303 GGLASLIDQGWRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAEAP 362 GG+A L+ Q R+L+ G +MA L AAL + G ++ EM Y SL + + Sbjct: 310 GGIAGLLMQFMRLLQYGKLQ-QMAAHLALALLAALLMGLGFIVLVEMLYHLSLNARNGST 368 Query: 363 LRWWGWTVDVHAPLPWMTALLLMSGGVAALCCWR 396 L +GWT+D W+ AL + G L WR Sbjct: 369 LLLFGWTLDTAQAQGWLLALCV--AGTGGLIWWR 400 >ref|ZP_08274986.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480] gb|EGF31546.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480] Length = 425 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 226/384 (58%), Positives = 281/384 (73%), Gaps = 3/384 (0%) Query: 8 WLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSGLGAF 67 W FA++L+ APL+F + A+LSLLSQ+GT+ + LS+NMLLG+GGMLSFGHAVYSGLGAF Sbjct: 16 WCCFAVILVVAPLIFHEGASLSLLSQVGTLTIFALSFNMLLGQGGMLSFGHAVYSGLGAF 75 Query: 68 GAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGLVELVS 127 AIH +N MA P+ LVPL GG+ G G+L GY+TT+++GTTF+MITLGLVELV Sbjct: 76 FAIHALN-MATAGAPIPVMLVPLIGGVAGMGFGILFGYVTTKKSGTTFSMITLGLVELVF 134 Query: 128 ACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWALRATPL 187 A LMFPE FGGEGGIS NRVIGEP +GI++GPQIQVYYLIA WL + I ++A TPL Sbjct: 135 AASLMFPEFFGGEGGISTNRVIGEPFMGITFGPQIQVYYLIAFWLFITTIGMYAFTQTPL 194 Query: 188 GRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAEYVGALRS 247 GR+ NAVRDNPER FIGYD Q VRY+ LILSAFFAG+SGGLSAINFEIVSAE V ALRS Sbjct: 195 GRLANAVRDNPERVEFIGYDTQWVRYMTLILSAFFAGISGGLSAINFEIVSAENVSALRS 254 Query: 248 GAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAPGGLAS 307 GA+LLFTFIGG +F+GP++G V+GV + LS +T+AWQ YLG FFILIVM APGGLAS Sbjct: 255 GAVLLFTFIGGIGFFFGPMIGAVIGVFLTVMLSDFTKAWQLYLGVFFILIVMYAPGGLAS 314 Query: 308 LIDQGWRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAEAPLRWWG 367 L+ R++ F +R+A A A L + AG V+ E+ Y +L A + + Sbjct: 315 LLMMNVRLVVHRQF-SRVAPLLGAICGAGLVIFAGAVILIEVLYHVTLDIGAGPMMTLFR 373 Query: 368 WTVDVHAPLPWMT-ALLLMSGGVA 390 +D + W+ A L++ G +A Sbjct: 374 VEIDTGSATAWLVGAALVVIGSIA 397 >ref|YP_549390.1| inner-membrane translocator [Polaromonas sp. JS666] gb|ABE44492.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Polaromonas sp. JS666] Length = 430 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 213/400 (53%), Positives = 277/400 (69%), Gaps = 2/400 (0%) Query: 3 RLLLPWLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYS 62 R LL W FALVL APLVF S + ++LSQMG +++CLSYN+LLG+GGMLSFGHAVYS Sbjct: 15 RFLL-WSLFALVLALAPLVFTSSLSHTILSQMGIAIIVCLSYNILLGQGGMLSFGHAVYS 73 Query: 63 GLGAFGAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGL 122 G+G+F AIH +N+++ GAL P++L+P+AGGL L V+LG++TT+++GTTFAMITLG+ Sbjct: 74 GMGSFLAIHTLNKISSGALGVPVSLIPIAGGLASMLVAVVLGWVTTKKSGTTFAMITLGV 133 Query: 123 VELVSACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWAL 182 EL+ A LMFPE FGGEGG+SGNRV G V GI+YGPQ+Q+YYLIA + LVC ++A Sbjct: 134 GELIWAMSLMFPEFFGGEGGVSGNRVTGAKVWGITYGPQVQLYYLIAAYTLVCTALMFAF 193 Query: 183 RATPLGRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAEYV 242 TPLGR+LNAVRDNPER F+GYD Q+VRY + I++AFFAG+SGGL+A+NFEIV++E V Sbjct: 194 TRTPLGRMLNAVRDNPERVEFVGYDTQKVRYFSFIVAAFFAGISGGLAALNFEIVTSEVV 253 Query: 243 GALRSGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAP 302 RSGA LLFTF+GG+ +F+GPI+G V+ VL LS +T+AW YLG F+ +VM AP Sbjct: 254 SGYRSGAYLLFTFLGGATFFFGPIIGAVLMVLAFVLLSEFTKAWLLYLGLIFLFMVMYAP 313 Query: 303 GGLASLIDQGWRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAEAP 362 GG+ASLI R+ G ++ V A AL VL G EM Y L + Sbjct: 314 GGVASLIMMNLRVAVFGHLR-KLWVGYLALALTALVVLIGAAAMIEMIYHLQLNAALGPE 372 Query: 363 LRWWGWTVDVHAPLPWMTALLLMSGGVAALCCWRRQGGRS 402 L + G +D W+ AL + G+ RRQ R Sbjct: 373 LTFLGARLDSRGLNSWIGALFVTLTGLGLFEVCRRQFARE 412 >ref|YP_004619121.1| branched chain amino acid ABC transporter permease [Ramlibacter tataouinensis TTB310] gb|AEG93102.1| candidate ABC type branched chain amino acid transport systems, permease component [Ramlibacter tataouinensis TTB310] Length = 430 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 211/400 (52%), Positives = 272/400 (68%), Gaps = 7/400 (1%) Query: 6 LPWLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSGLG 65 L W FAL L+ APLVF ++++LSQMG ++ CLSYN+LLG+GGMLSFGHAVY+GLG Sbjct: 16 LIWSLFALALVFAPLVFTSGLSITMLSQMGIAIIACLSYNILLGQGGMLSFGHAVYTGLG 75 Query: 66 AFGAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGLVEL 125 ++ AIH +N++A G+L P+ +PL GGL G LLGY+TT+++GTTFAMITLG+ EL Sbjct: 76 SYLAIHALNQVASGSLPLPVVTIPLVGGLAGMGFAALLGYVTTKKSGTTFAMITLGIGEL 135 Query: 126 VSACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWALRAT 185 V A LM PE FGGEGGI+ NRV+G+P LGI++GP IQVYYLIA + V A++A T Sbjct: 136 VFAMSLMVPEFFGGEGGINANRVVGKPFLGINFGPPIQVYYLIAAYTFVSVAAMFAFTRT 195 Query: 186 PLGRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAEYVGAL 245 PLGRILNAVRDNPER FIGYD Q+VRYLA I + FFAG+SGGL+A+NFEIV+AE VGA Sbjct: 196 PLGRILNAVRDNPERVEFIGYDTQKVRYLAFITAGFFAGISGGLAALNFEIVTAEVVGAA 255 Query: 246 RSGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAPGGL 305 RSGA LLFTF+GG+ +F+GPI+G ++ VL S +T AW YLG F+ +VM APGG+ Sbjct: 256 RSGAYLLFTFLGGATFFFGPIIGAILMVLAFILFSEFTAAWLLYLGLIFLFMVMYAPGGV 315 Query: 306 ASLIDQGWRILRSGAFDTRMAVRATAWLA---AALPVLAGLVLATEMAYQASLGSLAEAP 362 ASLI R+ G R+ ++LA AL +AG EM Y L SL Sbjct: 316 ASLIMMNLRVAAFG----RLRPLWVSYLALAFCALVAMAGGAAIVEMVYHLQLSSLPGGT 371 Query: 363 LRWWGWTVDVHAPLPWMTALLLMSGGVAALCCWRRQGGRS 402 +++ G +D + W + +M G+ RRQ R Sbjct: 372 VKFMGAALDPRSVDSWFGSAFVMLTGIGLFELARRQFSRQ 411 >ref|YP_004685377.1| ABC transporter permease [Cupriavidus necator N-1] gb|AEI76896.1| ABC transport system permease protein [Cupriavidus necator N-1] Length = 437 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 209/389 (53%), Positives = 269/389 (69%), Gaps = 4/389 (1%) Query: 13 LVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSGLGAFGAIHL 72 L +L PL+F A++L+SQMG M++ LSYNMLLG+ GMLSFGHAVYSGLGAF A+H+ Sbjct: 36 LAMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFGHAVYSGLGAFIAVHV 95 Query: 73 MNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGLVELVSACVLM 132 +N + G + P++++PL GGL GA GV+ GY+TT+++GTTFAMIT+G+ E+V A LM Sbjct: 96 LNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAMITMGIGEMVFASSLM 155 Query: 133 FPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWALRATPLGRILN 192 FPE FGGEGGIS NRV+G+P LGI++GP QVYYLIA W L+ +A++A TPLGRI N Sbjct: 156 FPEFFGGEGGISTNRVVGDPFLGITFGPGRQVYYLIAAWCLLSMVAMYAWTQTPLGRIAN 215 Query: 193 AVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAEYVGALRSGAILL 252 AVRDNPER FIGY+ QRVRYL LILSAFFAG++G L AINFEIVSAE V A+RSG +LL Sbjct: 216 AVRDNPERVEFIGYNTQRVRYLVLILSAFFAGIAGALGAINFEIVSAENVSAVRSGGVLL 275 Query: 253 FTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAPGGLASLIDQG 312 FIGG+ F+GPI+G VV VLF+ LS T+AW YLG FF+L+VM PGGLASL+ Sbjct: 276 AVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKAWLLYLGLFFVLMVMFVPGGLASLLLMQ 335 Query: 313 WRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAEAPLRWWGWTVDV 372 +L G + A A A + +LA ++L E+ Y+ + S + +G D Sbjct: 336 MPLLGKGKLGPMLPSYARAGGAGVVLLLA-MILTVELVYKVQVDSANGTAMSLFGVGFDA 394 Query: 373 HAPLPWMTALLLMSGGVAALCCWRRQGGR 401 PW+ A +L + G L WR R Sbjct: 395 ATWTPWLVAAVLWAAG---LFAWRLAAAR 420 >ref|YP_295615.1| inner-membrane translocator [Ralstonia eutropha JMP134] gb|AAZ60771.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ralstonia eutropha JMP134] Length = 439 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 212/389 (54%), Positives = 270/389 (69%), Gaps = 4/389 (1%) Query: 13 LVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSGLGAFGAIHL 72 LV+L PL+F A++L+SQMG M++ LSYNMLLG+ GMLSFGHAVYSGLGAF A+H+ Sbjct: 38 LVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFGHAVYSGLGAFIAVHV 97 Query: 73 MNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGLVELVSACVLM 132 +N + G + P++++PL GGL GA GVL GY+TT+++GTTFAMIT+G+ E+V A LM Sbjct: 98 LNMLGAGKVWLPVSMLPLVGGLAGAFFGVLFGYVTTKKSGTTFAMITMGIGEMVFASSLM 157 Query: 133 FPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWALRATPLGRILN 192 FPE FGGEGGIS NRV+G+P LGI++GP QVYYLIA W LV +A++A TPLGRI N Sbjct: 158 FPEFFGGEGGISTNRVVGDPFLGITFGPGRQVYYLIAAWCLVSMVAMYAWTQTPLGRIAN 217 Query: 193 AVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAEYVGALRSGAILL 252 AVRDNPER FIGY+ QRVRYL LILSAFFAG+SG LSAINFEIVSAE V A+RSG +LL Sbjct: 218 AVRDNPERVEFIGYNTQRVRYLVLILSAFFAGISGALSAINFEIVSAENVSAVRSGGVLL 277 Query: 253 FTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAPGGLASLIDQG 312 FIGG+ F+GPI+G VV +LF+ LS T+AW YLG FF+L+VM PGG+ASL+ Sbjct: 278 AAFIGGAGVFFGPIIGAVVFMLFAVALSDLTKAWLLYLGLFFVLMVMFVPGGIASLLLMQ 337 Query: 313 WRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAEAPLRWWGWTVDV 372 ++ G F +M AA + +LA ++L E+ Y+ + S + +G D Sbjct: 338 MPLVAKGKFK-QMLPSYGRAAAAGVVLLAAMILTVELVYKVQVDSANGTDMSLFGIAFDA 396 Query: 373 HAPLPWMTALLLMSGGVAALCCWRRQGGR 401 P+ W A L G L WR R Sbjct: 397 GKPMAWAVAAALWVAG---LLAWRMAAAR 422 >ref|YP_002005479.1| branched-chain amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424] emb|CAQ69412.1| putative ABC-type branched-chain amino acid transporter, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 437 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 204/366 (55%), Positives = 263/366 (71%), Gaps = 1/366 (0%) Query: 13 LVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSGLGAFGAIHL 72 LV+L PL+F A++L+SQMG M++ LSYNMLLG+ GMLSFGHAVYSGLGAF A+H+ Sbjct: 36 LVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFGHAVYSGLGAFIAVHV 95 Query: 73 MNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGLVELVSACVLM 132 +N + G + P++++PL GGL GA GV+ GY+TT++AGTTFAMIT+G+ E+V A LM Sbjct: 96 LNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKAGTTFAMITMGIGEMVFASSLM 155 Query: 133 FPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWALRATPLGRILN 192 FPE FGGEGGIS NRV+G+P LGI++GP QVYYLIA W L+ +A++A TPLGRI N Sbjct: 156 FPEFFGGEGGISTNRVVGDPFLGITFGPGRQVYYLIAAWCLLSMVAMYAWTQTPLGRIAN 215 Query: 193 AVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAEYVGALRSGAILL 252 AVRDNPER FIGY+ QRVRYL LILSAFFAG+SG L+AINFEIVSAE V A+RSG +LL Sbjct: 216 AVRDNPERVEFIGYNTQRVRYLVLILSAFFAGISGALAAINFEIVSAENVSAVRSGGVLL 275 Query: 253 FTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAPGGLASLIDQG 312 FIGG+ F+GPI+G VV VLF+ LS T+AW YLG FF+L+VM PGGLASL+ Sbjct: 276 AVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKAWLLYLGLFFVLMVMFVPGGLASLLLMQ 335 Query: 313 WRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAEAPLRWWGWTVDV 372 +L + A A A + +LA +++ E+ Y+ + S ++ +G VD Sbjct: 336 LPLLGKRKLGRMLPYYARAGGAGVVLLLA-MIVTIELVYKVQVDSANGTAMKLFGIGVDA 394 Query: 373 HAPLPW 378 +PW Sbjct: 395 ATWMPW 400 >ref|YP_726022.1| ABC-type transporter, permease component [Ralstonia eutropha H16] emb|CAJ92654.1| ABC-type transporter, permease component [Ralstonia eutropha H16] Length = 437 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 209/389 (53%), Positives = 267/389 (68%), Gaps = 4/389 (1%) Query: 13 LVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSGLGAFGAIHL 72 LV+L PL+F A++L+SQMG M++ LSYNMLLG+ GMLSFGHAVYSGLGAF A+H+ Sbjct: 36 LVMLVLPLIFTGGFAITLMSQMGIMIIFALSYNMLLGQTGMLSFGHAVYSGLGAFIAVHV 95 Query: 73 MNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGLVELVSACVLM 132 +N + G + P++++PL GGL GA GV+ GY+TT+++GTTFAMIT+G+ E+V A LM Sbjct: 96 LNMVGAGKVWLPVSMLPLVGGLAGAFFGVIFGYVTTKKSGTTFAMITMGIGEMVFASSLM 155 Query: 133 FPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWALRATPLGRILN 192 FPE FGGEGGIS NRV+G+P LGI++GP QVYYLIA W L+ +A++A TPLGRI N Sbjct: 156 FPEFFGGEGGISTNRVVGDPFLGITFGPGRQVYYLIAAWCLLSMVAMYAWTQTPLGRIAN 215 Query: 193 AVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVSAEYVGALRSGAILL 252 AVRDNPER FIGY+ QRVRYL LILSAFFAG++G L AINFEIVSAE V A+RSG +LL Sbjct: 216 AVRDNPERVEFIGYNTQRVRYLVLILSAFFAGIAGALGAINFEIVSAENVSAVRSGGVLL 275 Query: 253 FTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAPGGLASLIDQG 312 FIGG+ F+GPI+G VV VLF+ LS T+AW YLG FF+L+VM PGGLASL+ Sbjct: 276 AVFIGGAGVFFGPIIGAVVFVLFAVALSDLTKAWLLYLGLFFVLMVMFVPGGLASLLLMQ 335 Query: 313 WRILRSGAFDTRMAVRATAWLAAALPVLAGLVLATEMAYQASLGSLAEAPLRWWGWTVDV 372 +L G + A A AA + +LA ++L E+ Y+ + S + +G D Sbjct: 336 VPLLGKGKLGRMLPSYARAGGAAVVLLLA-MILTVELVYKVQVDSANGTTMSLFGVGFDA 394 Query: 373 HAPLPWMTALLLMSGGVAALCCWRRQGGR 401 W L + A L WR R Sbjct: 395 AT---WTPWLAAAALWAAGLFAWRLAAAR 420 >ref|YP_004234832.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46265.1| inner-membrane translocator [Acidovorax avenae subsp. avenae ATCC 19860] Length = 440 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 204/399 (51%), Positives = 272/399 (68%), Gaps = 8/399 (2%) Query: 8 WLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSGLGAF 67 W FAL L+ AP++F S AL++LSQ+G ++++CLSYN+LLG+GGMLSFGHAVY+GLG+F Sbjct: 23 WGLFALALIVAPMLFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYTGLGSF 82 Query: 68 GAIHLMNRMAEGALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMITLGLVELVS 127 A+H MN +GAL P+ L+PL GGL G VLLG++TT+++GTTFAMITLG+ ELV+ Sbjct: 83 MAVHAMNWAGKGALPVPLVLIPLVGGLAGMFFAVLLGFVTTKKSGTTFAMITLGIGELVA 142 Query: 128 ACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIAIWALRATPL 187 + LMFPEVFGGEGGI+ +RV G+ GI++GP IQVYYLIA + VC ++A TPL Sbjct: 143 SMALMFPEVFGGEGGITTDRVYGKGFFGITFGPAIQVYYLIAAYCFVCTALMFAFTGTPL 202 Query: 188 GRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVS-AEYVGALR 246 GR+LNAVRDNPER FIGY+ QRVRY A I+S FFAG+ G L+AINFEIV+ A+ V +R Sbjct: 203 GRMLNAVRDNPERVEFIGYNTQRVRYYAFIISGFFAGIGGALAAINFEIVTAADSVSVMR 262 Query: 247 SGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIVMTAPGGLA 306 SG+ LLFTF+GG+ +F+GPI+G V+ V S LS ++AW YLG F+ +VM APGG+A Sbjct: 263 SGSYLLFTFLGGATFFFGPIIGAVLLVFASVLLSELSKAWLLYLGLVFLFMVMYAPGGIA 322 Query: 307 SLIDQGWRILRSGAFDTRMAVRATAWLAAALPVLAGLVLAT---EMAYQASLGSLAEAPL 363 SLI R+ R G R+ +LA A L + A EM Y L + + Sbjct: 323 SLIMMNLRVARHG----RLKPLLPGYLALACSALVAVAGAAAMIEMTYHLQLNAALGPQI 378 Query: 364 RWWGWTVDVHAPLPWMTALLLMSGGVAALCCWRRQGGRS 402 + G T+D + W A L+ + G+ RR+ R+ Sbjct: 379 GFLGMTLDARSAATWTGAGLVFAVGLGLFELCRRRFARA 417