BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0021.p (1069 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775665.1| DNA polymerase III subunit alpha [Herbaspiri... 1751 0.0 ref|ZP_03264505.1| DNA polymerase III, alpha subunit [Burkholder... 1380 0.0 ref|YP_001796002.1| Error-prone DNA polymerase [Cupriavidus taiw... 1364 0.0 ref|YP_003907290.1| DNA polymerase III subunit alpha [Burkholder... 1362 0.0 ref|YP_003604847.1| DNA polymerase III, alpha subunit [Burkholde... 1358 0.0 ref|ZP_02881491.1| DNA polymerase III, alpha subunit [Burkholder... 1354 0.0 ref|YP_001858195.1| DNA polymerase III subunit alpha [Burkholder... 1354 0.0 ref|ZP_06844009.1| DNA polymerase III, alpha subunit [Burkholder... 1352 0.0 ref|ZP_04940469.1| DNA polymerase III alpha subunit [Burkholderi... 1340 0.0 ref|YP_004682933.1| error-prone DNA polymerase DnaE [Cupriavidus... 1320 0.0 >ref|YP_003775665.1| DNA polymerase III subunit alpha [Herbaspirillum seropedicae SmR1] gb|ADJ63757.1| DNA polymerase III, alpha subunit protein [Herbaspirillum seropedicae SmR1] Length = 942 Score = 1751 bits (4535), Expect = 0.0, Method: Compositional matrix adjust. Identities = 888/912 (97%), Positives = 891/912 (97%), Gaps = 17/912 (1%) Query: 1 MSTTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWK 60 MSTTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWK Sbjct: 1 MSTTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWK 60 Query: 61 EQFDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTR 120 EQFDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTR Sbjct: 61 EQFDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTR 120 Query: 121 AAKGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSW 180 AAKGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSW Sbjct: 121 AAKGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSW 180 Query: 181 VGITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQE 240 VGITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQE Sbjct: 181 VGITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQE 240 Query: 241 CGHALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSA 300 CGHALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSA Sbjct: 241 CGHALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSA 300 Query: 301 ADYLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGIL 360 ADYLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGIL Sbjct: 301 ADYLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGIL 360 Query: 361 CQGRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHI 420 CQGRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHI Sbjct: 361 CQGRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHI 420 Query: 421 YRKYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAE 480 YRKYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAE Sbjct: 421 YRKYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAE 480 Query: 481 AGLDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEW 540 AGLDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEW Sbjct: 481 AGLDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEW 540 Query: 541 DKDDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKA 600 DKDDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKA Sbjct: 541 DKDDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKA 600 Query: 601 DTIGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGS 660 DTIGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGS Sbjct: 601 DTIGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGS 660 Query: 661 FDYPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGG 720 FDYPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGG Sbjct: 661 FDYPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGG 720 Query: 721 MGPHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEP 780 MGPHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEP Sbjct: 721 MGPHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEP 780 Query: 781 EAFLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRL 840 EAFLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRL Sbjct: 781 EAFLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRL 840 Query: 841 GLSLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQ 900 GLSLLRSMPAEAAQRIEQARAQRPFADVDDLARRAG+DRPA + H RQ Sbjct: 841 GLSLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGLDRPACR-------------HWRQ 887 Query: 901 AL----WHAVGA 908 A+ W A GA Sbjct: 888 AMPCANWPATGA 899 >ref|ZP_03264505.1| DNA polymerase III, alpha subunit [Burkholderia sp. H160] gb|EEA03869.1| DNA polymerase III, alpha subunit [Burkholderia sp. H160] Length = 1049 Score = 1380 bits (3572), Expect = 0.0, Method: Compositional matrix adjust. Identities = 693/1066 (65%), Positives = 817/1066 (76%), Gaps = 23/1066 (2%) Query: 3 TTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWKEQ 62 T LP YAEL+C SNF+FL+GASHA EL RA L Y ALAITDEC+LAGVVRA+ A KE Sbjct: 6 TMLPAYAELFCFSNFTFLRGASHAEELAGRAAQLGYSALAITDECSLAGVVRAHVAAKEA 65 Query: 63 FDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTRAA 122 I+GS FR + PA L+ LARNR GYGNLSELITLAR RA Sbjct: 66 -------KLPFIVGSYFRLVNADGSPA-----FGLILLARNRNGYGNLSELITLARMRAP 113 Query: 123 KGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSWVG 182 KG Y L P+DLS P A HL +PDC ILVPD+PA E+ LDAQ+ W GR+WVG Sbjct: 114 KGEYRLTPQDLSRPEKAYRHLLGMPDCLAILVPDFPASEDALDAQVEWLDATFTGRAWVG 173 Query: 183 ITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQECG 242 + R +DD+HR A+E R +P+ A+G+V MH RSRK LQD +TAIR+G+PV ECG Sbjct: 174 LVLHQRAMDDMHRGAVEFVARSRDVPVVALGEVVMHVRSRKPLQDTMTAIRVGKPVHECG 233 Query: 243 HALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSAAD 302 + LAPNAEQHLRSR+RL ++ LA TL I + C FSL ELRYEYPDELVP G + A Sbjct: 234 YDLAPNAEQHLRSRLRLANLYPQDALAATLDITSRCTFSLDELRYEYPDELVPAGHTPAS 293 Query: 303 YLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGILCQ 362 YLRQ+T GA +R+P G+P V++QIE EL LIA +YE YFLTVYD+V+FARS+ ILCQ Sbjct: 294 YLRQETYIGAQRRFPSGIPHHVQQQIEHELELIADLQYEPYFLTVYDIVRFARSQHILCQ 353 Query: 363 GRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHIYR 422 GRGSAANSAVCYCLGVTEVDP +LF RFIS++R EPPDIDVDFEHQRREEVIQ+IYR Sbjct: 354 GRGSAANSAVCYCLGVTEVDPARGNMLFERFISKERGEPPDIDVDFEHQRREEVIQYIYR 413 Query: 423 KYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAEAG 482 KYGR RAA+AAAV +YRPRGALRE GKALGVD IVDAVAKS HWFD R++LLARFAE+G Sbjct: 414 KYGRDRAAIAAAVSTYRPRGALRETGKALGVDPLIVDAVAKSHHWFDGRQDLLARFAESG 473 Query: 483 LDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEWDK 542 LDP+ P I WA + +LL FPRHLSQH+GGFVI+RG+L+RLVP++NAAM +R VIEWDK Sbjct: 474 LDPDKPLIQAWAKLASQLLNFPRHLSQHSGGFVISRGKLTRLVPVENAAMVDRSVIEWDK 533 Query: 543 DDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKADT 602 DDLESL LLKVDVLALGML+A+RRTL+LVS +RG E +M IP ED AT+ MI ADT Sbjct: 534 DDLESLGLLKVDVLALGMLSAIRRTLDLVSEQRG--ERFEMQDIPAEDEATYAMISAADT 591 Query: 603 IGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGSFD 662 +GVFQIESRAQMSMLPRM+P YDLV++VAIVRPGPIQGG VHPYL+RR+ Sbjct: 592 VGVFQIESRAQMSMLPRMRPTEFYDLVIEVAIVRPGPIQGGAVHPYLQRRQ--------G 643 Query: 663 YPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGGMG 722 + T S +K L RTLG+PIFQEQVM VAI AAG++ EAD LRR+MAAWKRKGG+ Sbjct: 644 FEPVTYPSDALKTALGRTLGVPIFQEQVMQVAILAAGFTAGEADQLRRAMAAWKRKGGLE 703 Query: 723 PHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEPEA 782 +Y+R+VLGM + GY++ FAE+IF+QI+GFGEYGFPESHAASFALL Y SSWLKCHEPEA Sbjct: 704 KYYDRIVLGMQERGYTQAFAEAIFEQIKGFGEYGFPESHAASFALLVYASSWLKCHEPEA 763 Query: 783 FLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRLGL 842 FL +LNSQPMGFYSPSQL+QDA+RHGV+VLP +V S W+S+LE P++ RPAVRLGL Sbjct: 764 FLAAMLNSQPMGFYSPSQLVQDAKRHGVKVLPVDVTVSGWDSSLE-PNAGTPRPAVRLGL 822 Query: 843 SLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQAL 902 SLLR M AA+RIE ARA RPFA V+DLARRA +DR L ALA +AL LAG+RR+AL Sbjct: 823 SLLRGMKDGAAERIENARAVRPFASVNDLARRAQLDRKDLHALAQANALTSLAGNRREAL 882 Query: 903 WHAVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRPTLQRR 962 W +V AVPD+D+L +A D+ +L AP E D I+ DYR++ LTL RHPL LLRP L Sbjct: 883 WQSVVAVPDKDMLAAAAAQDETPELGAPSEADDIVADYRSLGLTLNRHPLELLRPQLLAN 942 Query: 963 RFMSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAVLERQR 1022 R M + L T ++ + A CG+VTVRQRPGTAKGV+F+TLEDETG+ NVIIWP +LE+QR Sbjct: 943 RLMPASTLRTYRDGRLARACGLVTVRQRPGTAKGVVFVTLEDETGNVNVIIWPGLLEKQR 1002 Query: 1023 SEVLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 E L A LL VYG+WQC GEVRHLVA RL D +HLLGELQ SRDF Sbjct: 1003 KEALGAALLAVYGTWQCQGEVRHLVAQRLVDMSHLLGELQTTSRDF 1048 >ref|YP_001796002.1| Error-prone DNA polymerase [Cupriavidus taiwanensis] emb|CAP63795.1| Error-prone DNA polymerase [Cupriavidus taiwanensis LMG 19424] Length = 1050 Score = 1364 bits (3531), Expect = 0.0, Method: Compositional matrix adjust. Identities = 680/1068 (63%), Positives = 817/1068 (76%), Gaps = 23/1068 (2%) Query: 1 MSTTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWK 60 ++T LP+YAEL+C SNFSFL GAS EL +RA L Y ALAITDEC+LAG+VRA+ Sbjct: 5 LATGLPDYAELHCLSNFSFLTGASRPEELAERAAQLGYHALAITDECSLAGIVRAHT--- 61 Query: 61 EQFDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTR 120 + + +L++G+ F + PA L++VALARNREGYGNL ELITLAR R Sbjct: 62 ----EAKKAGMRLVVGASFHLQNADGSPA-----LSVVALARNREGYGNLCELITLARMR 112 Query: 121 AAKGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSW 180 AAKGSY+L P DL+ P HL+ LPDC +I PDY A + LD Q W + GR+W Sbjct: 113 AAKGSYVLTPRDLAAPEAPHQHLKGLPDCLIIFTPDYGAPADRLDLQAAWVSATFAGRAW 172 Query: 181 VGITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQE 240 +G+ LYRPLDD+HR +EAA RH L + A G V MH RSRK + DV+TAIR+G+PV E Sbjct: 173 MGLNLLYRPLDDIHRGTVEAAAARHHLRVVATGCVTMHVRSRKPMLDVLTAIRVGRPVPE 232 Query: 241 CGHALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSA 300 CG+ LAPNAEQHLRSR+RL ++ L + + IA C+FSL ELRYEYPDE+VP G + Sbjct: 233 CGYDLAPNAEQHLRSRLRLANIYPHRYLTEAVHIANLCQFSLDELRYEYPDEVVPDGTTP 292 Query: 301 ADYLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGIL 360 ADYLR +T AGA +R+P G+P V++QIE ELAL+ +YE YFLTV D+V+FARS GIL Sbjct: 293 ADYLRTETYAGAHRRFPAGIPLAVQQQIEHELALVRDMDYERYFLTVSDIVRFARSNGIL 352 Query: 361 CQGRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHI 420 CQGRGSAANSA+CYCLG+TEVDP LLF RFIS++R EPPDIDVDFEHQRREEVIQ++ Sbjct: 353 CQGRGSAANSAICYCLGITEVDPARGNLLFERFISKERGEPPDIDVDFEHQRREEVIQYL 412 Query: 421 YRKYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAE 480 YRKYGR RAALAAAV +YRPR ALR+ GKALGVD AIVD VAKS HWFD + +LL RFAE Sbjct: 413 YRKYGRDRAALAAAVTTYRPRSALRDTGKALGVDPAIVDLVAKSHHWFDGKADLLKRFAE 472 Query: 481 AGLDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEW 540 +G+D E WA + LL FPRHLSQHTGGFV+ARG+LSRLVPI+NAAM +R VI+W Sbjct: 473 SGVDAEAELSQRWAHMAVSLLGFPRHLSQHTGGFVLARGKLSRLVPIENAAMADRSVIQW 532 Query: 541 DKDDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKA 600 DKDDL++L LLKVDVLALGML+A+RR L+LV+ +RG E ++ IP ED AT+EMIC+A Sbjct: 533 DKDDLDALGLLKVDVLALGMLSAVRRALDLVAEQRG--EAFELQDIPAEDHATYEMICRA 590 Query: 601 DTIGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGS 660 DT+GVFQIESRAQMSMLPR+QPRT YDLV++VAIVRPGP+QGGMVHPYLRRR+ Sbjct: 591 DTVGVFQIESRAQMSMLPRLQPRTFYDLVIEVAIVRPGPVQGGMVHPYLRRRQ------- 643 Query: 661 FDYPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGG 720 + T S ++K L RTLG+PIFQEQVM VA+ AAG+S EAD LRR+MAAWKRKGG Sbjct: 644 -GFEPVTYPSAAMEKALSRTLGVPIFQEQVMQVAMLAAGFSAGEADQLRRAMAAWKRKGG 702 Query: 721 MGPHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEP 780 + +Y+R+V GM + GY REFAESIF+QI+GFGEYGFPESHAASFALL Y S+WLKCHEP Sbjct: 703 IDKYYDRIVSGMLERGYDREFAESIFRQIQGFGEYGFPESHAASFALLVYASAWLKCHEP 762 Query: 781 EAFLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRL 840 EAFLC +LNSQPMGFY+PSQL+QDA+RHGV VLPA+V S W+S LE P AG+RPAVRL Sbjct: 763 EAFLCAMLNSQPMGFYTPSQLVQDAKRHGVTVLPADVAVSGWDSALE-PFHAGSRPAVRL 821 Query: 841 GLSLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQ 900 GLSLLR M EAAQRIE+ARA RPFA +LARRA +DR LQ LA+G+AL + G RRQ Sbjct: 822 GLSLLRGMRREAAQRIEEARAIRPFASTAELARRAALDRHDLQVLASGNALASITGGRRQ 881 Query: 901 ALWHAVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRPTLQ 960 ALW A AVPD+D+LR+ +++ +L EG++I+ DYRAM LTLRRHPLALLRP L Sbjct: 882 ALWQAAAAVPDKDMLRATELAEESAELVPATEGEEIVGDYRAMGLTLRRHPLALLRPMLS 941 Query: 961 RRRFMSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAVLER 1020 RRF+S A+L Q RQ A G+VTVRQRP T+ GVIFMTLEDETG NVI+WP V ER Sbjct: 942 ARRFVSAAELAQYQPRQTARAAGLVTVRQRPSTSNGVIFMTLEDETGVVNVIVWPGVFER 1001 Query: 1021 QRSEVLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 R EVL AR+ G+YG WQC GEVRHL+A R+ D + +LG L SR+F Sbjct: 1002 FRKEVLGARMAGIYGQWQCEGEVRHLIAQRVVDLSSMLGRLDTASRNF 1049 >ref|YP_003907290.1| DNA polymerase III subunit alpha [Burkholderia sp. CCGE1003] gb|ADN57999.1| DNA polymerase III, alpha subunit [Burkholderia sp. CCGE1003] Length = 1049 Score = 1362 bits (3526), Expect = 0.0, Method: Compositional matrix adjust. Identities = 691/1071 (64%), Positives = 812/1071 (75%), Gaps = 26/1071 (2%) Query: 1 MSTT---LPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYA 57 M TT LP YAEL+C SNFSFL+GASHA EL RA L Y ALAITDEC+LAGVVRA+ Sbjct: 1 MDTTFSMLPAYAELFCLSNFSFLRGASHAEELAGRAAQLGYSALAITDECSLAGVVRAHV 60 Query: 58 AWKEQFDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLA 117 A KE I+GS FR + PA L+ LA+NR GYGNLSELITLA Sbjct: 61 AAKEA-------KLPFIVGSYFRLVNADGSPA-----FGLILLAKNRNGYGNLSELITLA 108 Query: 118 RTRAAKGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPG 177 RTRA KG Y L P+DLS P HL +PDC ILVP++PA EE LDAQL W PG Sbjct: 109 RTRAPKGEYRLTPQDLSRPDRDYRHLLGVPDCLAILVPNFPAKEEVLDAQLEWLDETFPG 168 Query: 178 RSWVGITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQP 237 R+WVG+ R +DD+HR A+E R +P+ A+G+V MH RSRK LQD +TAIR+G+P Sbjct: 169 RAWVGLVLHQRAMDDIHRGAVEFIARNRDVPVVALGEVLMHVRSRKPLQDTLTAIRVGKP 228 Query: 238 VQECGHALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLG 297 V ECG+ LAPNAEQHLRSR+RL +++P LA T+ IAA C FSL ELRYEYPDELVP G Sbjct: 229 VHECGYDLAPNAEQHLRSRLRLANLYSPEALAATVDIAARCTFSLDELRYEYPDELVPSG 288 Query: 298 MSAADYLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSR 357 + A YLRQ+T GA +R+P G+P V+EQIE EL LIA+ +YE YFLTVYDLV+FARS+ Sbjct: 289 FTPAAYLRQETYIGAQRRFPSGIPLQVQEQIEHELELIAELQYEPYFLTVYDLVRFARSQ 348 Query: 358 GILCQGRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVI 417 ILCQGRGSAANSAVCYCLGVTEVDP +LF RFIS++R EPPDIDVDFEHQRREEVI Sbjct: 349 HILCQGRGSAANSAVCYCLGVTEVDPARGNMLFERFISKERGEPPDIDVDFEHQRREEVI 408 Query: 418 QHIYRKYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLAR 477 Q+IYRKYGR RAA+AAAV +YR RG LRE GKALGVD IVDAVAKS HWFD+ +LL R Sbjct: 409 QYIYRKYGRDRAAIAAAVSTYRARGVLRETGKALGVDLQIVDAVAKSHHWFDNSADLLKR 468 Query: 478 FAEAGLDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCV 537 F E GL+P+ P I WA++ +L FPRHLSQH+GGFVI+RG+L+RLVP++NAAMPER V Sbjct: 469 FEECGLNPQTPLIRAWATLAAQLYGFPRHLSQHSGGFVISRGKLTRLVPVENAAMPERSV 528 Query: 538 IEWDKDDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMI 597 I+WDKDDLESL LLKVDVLALGML+A+RRTLELVS +RG E +M IP ED AT++MI Sbjct: 529 IQWDKDDLESLGLLKVDVLALGMLSAIRRTLELVSEQRG--ERFEMQDIPAEDEATYDMI 586 Query: 598 CKADTIGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVRE 657 C ADT+GVFQIESRAQMSMLPRM+PR YDLV++VAIVRPGPIQGG VHPYLRRR+ Sbjct: 587 CAADTVGVFQIESRAQMSMLPRMRPRVFYDLVIEVAIVRPGPIQGGAVHPYLRRRQ---- 642 Query: 658 GGSFDYPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKR 717 + T S ++ L RTLG+PIFQEQVM VAI AAG++ EAD LRR+MAAWKR Sbjct: 643 ----GFEPVTYPSAALETALGRTLGVPIFQEQVMQVAILAAGFTAGEADQLRRAMAAWKR 698 Query: 718 KGGMGPHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKC 777 KGG+G +Y+R+VLGM + GY FAE+IF+QI+GFGEYGFPESHAASFALL Y SSWLKC Sbjct: 699 KGGLGKYYDRIVLGMQERGYDLAFAEAIFEQIKGFGEYGFPESHAASFALLVYTSSWLKC 758 Query: 778 HEPEAFLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPA 837 HEPEAFL +LNSQPMGFYS SQL+QDA+RHGV+VLP +V S W S+LE + G RPA Sbjct: 759 HEPEAFLAAMLNSQPMGFYSSSQLVQDAQRHGVKVLPVDVSVSGWNSSLE-RRAGGERPA 817 Query: 838 VRLGLSLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGH 897 VRLGLSLLR M A RIE ARA RPFA V DLARRA +DR L LA +AL LAG+ Sbjct: 818 VRLGLSLLRGMKEGTAGRIENARAVRPFASVKDLARRAALDRRDLHILADANALASLAGN 877 Query: 898 RRQALWHAVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRP 957 RR+ALW + AVP++D+L +A D+ +L AP E I+ DYR++ LTL RHPL LLRP Sbjct: 878 RREALWQSAAAVPEKDMLAAAAVEDETPELGAPSEAHDIVADYRSLGLTLGRHPLELLRP 937 Query: 958 TLQRRRFMSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAV 1017 L R M + L T ++ + A CG+VTVRQRPGTAKGVIF+T+EDETG+ NVIIWP++ Sbjct: 938 QLLANRLMPASTLRTYRDGRLARGCGLVTVRQRPGTAKGVIFVTIEDETGNVNVIIWPSL 997 Query: 1018 LERQRSEVLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 LE+QR E L+A LL VYG WQC GEVRHLVA RL D +HLLG LQ SR+F Sbjct: 998 LEKQRKEALSASLLAVYGVWQCQGEVRHLVAQRLVDMSHLLGGLQAVSRNF 1048 >ref|YP_003604847.1| DNA polymerase III, alpha subunit [Burkholderia sp. CCGE1002] gb|ADG15336.1| DNA polymerase III, alpha subunit [Burkholderia sp. CCGE1002] Length = 1049 Score = 1358 bits (3516), Expect = 0.0, Method: Compositional matrix adjust. Identities = 691/1066 (64%), Positives = 815/1066 (76%), Gaps = 23/1066 (2%) Query: 3 TTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWKEQ 62 T LP YAEL+C SNF+FL+GASHA EL QRA L Y ALAITDEC+LAGVVRA+ A KE Sbjct: 6 TMLPAYAELFCFSNFTFLRGASHAEELAQRAAQLGYSALAITDECSLAGVVRAHVAAKEA 65 Query: 63 FDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTRAA 122 I+GS FR + PA L+ LARNR GYGNLSELITLAR RA Sbjct: 66 -------KLPFIVGSYFRLVNADGSPA-----FGLILLARNRNGYGNLSELITLARMRAP 113 Query: 123 KGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSWVG 182 KG Y L P+DLS P HL +PDC ILVPD+PA E+ LDAQ+ W GR+WVG Sbjct: 114 KGEYRLTPQDLSRPEKEYRHLLGMPDCLAILVPDFPASEDALDAQVEWLDETFTGRAWVG 173 Query: 183 ITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQECG 242 + R +DD+HR A+E + +P+ A+G+V MH RSRK LQD +TAIR+G+PV ECG Sbjct: 174 LVLHQRAMDDMHRGAVEFVAKSRDVPVVALGEVVMHVRSRKPLQDTMTAIRVGKPVHECG 233 Query: 243 HALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSAAD 302 + LAPNAEQHLRSR+RL ++ LA T+ I + C FSL ELRYEYPDELVP G + A Sbjct: 234 YDLAPNAEQHLRSRLRLANLYPEDALAATVDIMSRCTFSLDELRYEYPDELVPAGHTPAS 293 Query: 303 YLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGILCQ 362 YLRQ+T GA +R+P G+P V++QIE EL LIA +YE YFLTVYD+V+FARS+ ILCQ Sbjct: 294 YLRQETYIGAQRRFPAGIPHHVQQQIEHELELIADLQYEPYFLTVYDIVRFARSQHILCQ 353 Query: 363 GRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHIYR 422 GRGSAANSAVCYCLGVTEVDP +LF RFIS++R EPPDIDVDFEHQRREEVIQ+IYR Sbjct: 354 GRGSAANSAVCYCLGVTEVDPARGNMLFERFISKERGEPPDIDVDFEHQRREEVIQYIYR 413 Query: 423 KYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAEAG 482 KYGR RAA+AAAV +YRPRGALRE GKALGVD IVDAVAKS HWFD+ +LLARFAE+G Sbjct: 414 KYGRDRAAIAAAVSTYRPRGALRETGKALGVDPQIVDAVAKSHHWFDTSRDLLARFAESG 473 Query: 483 LDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEWDK 542 LDP+ P I WA + +LL FPRHLSQH+GGFVI+RG+L+RLVP++NAAM +R VIEWDK Sbjct: 474 LDPDKPLIQAWAKLASQLLNFPRHLSQHSGGFVISRGKLTRLVPVENAAMADRSVIEWDK 533 Query: 543 DDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKADT 602 DDLESL LLKVDVLALGML+A+RRTL+LVS +RG E +M IP EDPAT+ MI ADT Sbjct: 534 DDLESLGLLKVDVLALGMLSAIRRTLDLVSEQRG--ERFEMQDIPSEDPATYAMISAADT 591 Query: 603 IGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGSFD 662 +GVFQIESRAQMSMLPRM+PRT YDLV++VAIVRPGPIQGG VHPYL+RR+ Sbjct: 592 VGVFQIESRAQMSMLPRMRPRTFYDLVIEVAIVRPGPIQGGAVHPYLQRRQ--------G 643 Query: 663 YPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGGMG 722 + T S +K L RTLG+PIFQEQVM VAI AAG++ EAD LRR+MAAWKRKGG+ Sbjct: 644 FEPVTYPSDALKTALGRTLGVPIFQEQVMQVAILAAGFTAGEADQLRRAMAAWKRKGGLE 703 Query: 723 PHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEPEA 782 +Y+R+VLGM + GY + FAE+IF+QI+GFGEYGFPESHAASFALL Y SSWLKCHEPEA Sbjct: 704 KYYDRIVLGMQERGYDQAFAEAIFEQIKGFGEYGFPESHAASFALLVYASSWLKCHEPEA 763 Query: 783 FLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRLGL 842 FL +LNSQPMGFYSPSQL+QDA+RHGV VLP +V S W S+LE P + RPAVRLGL Sbjct: 764 FLAAMLNSQPMGFYSPSQLVQDAQRHGVTVLPVDVTVSGWNSSLE-PRAGAMRPAVRLGL 822 Query: 843 SLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQAL 902 SLLR M AA+RIE ARA RPFA V+DLARRA +DR L ALA +AL LAG+RR+AL Sbjct: 823 SLLRGMKDGAAERIENARAVRPFASVNDLARRAQLDRKDLHALADANALAALAGNRREAL 882 Query: 903 WHAVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRPTLQRR 962 W +V AVPD+D+L +A D+ +L AP E I+ DYR++ LTL RHPL LLRP L Sbjct: 883 WQSVVAVPDKDMLAAAATQDETPELGAPSEAHDIVADYRSLGLTLNRHPLELLRPQLLAN 942 Query: 963 RFMSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAVLERQR 1022 R M + L T ++ + A CG+VTVRQRPGTAKGV+F+TLEDETG+ NVIIWP++LE+QR Sbjct: 943 RLMPASTLRTYRHGRLARGCGLVTVRQRPGTAKGVVFVTLEDETGNVNVIIWPSLLEKQR 1002 Query: 1023 SEVLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 E L A LL VYG+WQC GEVRHLVA RL D +HLLGELQ SR+F Sbjct: 1003 KEALGATLLAVYGTWQCQGEVRHLVAQRLVDMSHLLGELQTTSRNF 1048 >ref|ZP_02881491.1| DNA polymerase III, alpha subunit [Burkholderia graminis C4D1M] gb|EDT12920.1| DNA polymerase III, alpha subunit [Burkholderia graminis C4D1M] Length = 1049 Score = 1354 bits (3505), Expect = 0.0, Method: Compositional matrix adjust. Identities = 687/1066 (64%), Positives = 809/1066 (75%), Gaps = 23/1066 (2%) Query: 3 TTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWKEQ 62 T LP YAEL+C SNFSFL+GASHA EL +RA L Y ALAITDEC+LAGVVRA+ A KE Sbjct: 6 TMLPAYAELFCLSNFSFLRGASHAEELAERAAQLGYSALAITDECSLAGVVRAHVAAKEA 65 Query: 63 FDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTRAA 122 I+GS FR + PA L+ LARNREGYGNLSELITLARTRA Sbjct: 66 -------KLPFIVGSYFRLVNADGSPA-----FGLILLARNREGYGNLSELITLARTRAP 113 Query: 123 KGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSWVG 182 KG Y L P+DLS P HL +PDC ILVP +PA E+ LDAQ+ W PGR+WVG Sbjct: 114 KGEYRLTPQDLSRPDKEYRHLLGVPDCLAILVPSFPAKEDVLDAQVEWLDETFPGRAWVG 173 Query: 183 ITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQECG 242 + R +DD+HR A+E R +P+ A+G+V MH RSRK LQD +TAIR+G+PV ECG Sbjct: 174 LVLHQRAMDDIHRGAVEFVARNRDVPVVALGEVLMHVRSRKPLQDTITAIRVGKPVHECG 233 Query: 243 HALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSAAD 302 + LAPNAEQHLRSR+RL +++P LA T+ IAA C FSL ELRYEYPDELVP G + Sbjct: 234 YDLAPNAEQHLRSRLRLANLYSPDALAATVDIAARCTFSLDELRYEYPDELVPPGFTPGA 293 Query: 303 YLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGILCQ 362 YLRQ+T GA +R+P G+P V+EQIE EL LI +YE YFLTVYDLV+FARS+ ILCQ Sbjct: 294 YLRQETYIGAQRRFPSGIPHHVQEQIEHELELIGDLQYEPYFLTVYDLVRFARSQHILCQ 353 Query: 363 GRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHIYR 422 GRGSAANSAVCYCLGVTEVDP +LF RFIS++R EPPDIDVDFEHQRREEVIQ+IYR Sbjct: 354 GRGSAANSAVCYCLGVTEVDPARGNMLFERFISKERGEPPDIDVDFEHQRREEVIQYIYR 413 Query: 423 KYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAEAG 482 KYGR RAA+AAAV +YR RG LRE GKALGVD IVDAVAKS HWFD+ +LL RF E G Sbjct: 414 KYGRDRAAIAAAVSTYRARGVLRETGKALGVDLQIVDAVAKSHHWFDNSADLLKRFEECG 473 Query: 483 LDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEWDK 542 L+P+ P I WAS+ +L FPRHLSQH+GGFVI+RG+L+RLVP++NAAMPER VI+WDK Sbjct: 474 LNPDTPLIRAWASLAAQLYGFPRHLSQHSGGFVISRGKLTRLVPVENAAMPERSVIQWDK 533 Query: 543 DDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKADT 602 DDLESL LLK+DVLALGML+A+RRTL+LVS +RG E +M IP ED AT++MI ADT Sbjct: 534 DDLESLGLLKIDVLALGMLSAIRRTLDLVSEQRG--ERFEMQDIPAEDKATYDMISAADT 591 Query: 603 IGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGSFD 662 +GVFQIESRAQMSMLPRM+PRT YDLV++VAIVRPGPIQGG VHPYLRRR+ Sbjct: 592 VGVFQIESRAQMSMLPRMRPRTFYDLVIEVAIVRPGPIQGGAVHPYLRRRQ--------G 643 Query: 663 YPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGGMG 722 + T +K L RTLG+PIFQEQVM VAI AAG++ EAD LRR+MAAWKRKGG+G Sbjct: 644 FEPVTYPGDALKTALGRTLGVPIFQEQVMQVAILAAGFTAGEADQLRRAMAAWKRKGGLG 703 Query: 723 PHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEPEA 782 +Y+R+VLGM + GY FAE+IF+QI+GFGEYGFPESHAASFALL Y SSWLKCHEPEA Sbjct: 704 KYYDRIVLGMQERGYDLAFAEAIFEQIKGFGEYGFPESHAASFALLVYASSWLKCHEPEA 763 Query: 783 FLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRLGL 842 FL +LNSQPMGFYSPSQL+QDA+RHGV+VLP +V S W S+LE P + RPAVRLGL Sbjct: 764 FLAAMLNSQPMGFYSPSQLVQDAQRHGVKVLPVDVTISGWNSSLE-PMAGEKRPAVRLGL 822 Query: 843 SLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQAL 902 SLLR M A+RIE +RA RPFA V DLARRA +DR L LA +AL LAG+RR+AL Sbjct: 823 SLLRGMKEGTAERIENSRAVRPFASVKDLARRAALDRRDLHILADANALAALAGNRREAL 882 Query: 903 WHAVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRPTLQRR 962 W +V AVP++D+L +A D+ +L AP E + I+ DYR++ LTL RHPL LLRP L Sbjct: 883 WQSVAAVPEKDMLAAAAVEDETPELGAPSEANDILADYRSVGLTLGRHPLELLRPQLLAN 942 Query: 963 RFMSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAVLERQR 1022 R M A L T ++ + A CG+VTVRQRPGTAKGV+F+TLEDETG+ NVIIWP +LE+QR Sbjct: 943 RLMPAATLRTYRDGRLARGCGLVTVRQRPGTAKGVVFVTLEDETGNVNVIIWPTLLEKQR 1002 Query: 1023 SEVLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 E L+A LL VYG WQC GEVRHLVA RL D +HLLG L SR+F Sbjct: 1003 KEALSASLLAVYGVWQCQGEVRHLVAQRLVDMSHLLGGLHSVSRNF 1048 >ref|YP_001858195.1| DNA polymerase III subunit alpha [Burkholderia phymatum STM815] gb|ACC71149.1| DNA polymerase III, alpha subunit [Burkholderia phymatum STM815] Length = 1049 Score = 1354 bits (3504), Expect = 0.0, Method: Compositional matrix adjust. Identities = 681/1066 (63%), Positives = 812/1066 (76%), Gaps = 23/1066 (2%) Query: 3 TTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWKEQ 62 LP YAEL+C SNF+FLQGASHA EL +RA L Y LAITDEC+LAGVVRA+ A KE Sbjct: 6 NVLPAYAELFCLSNFTFLQGASHAEELAERASQLGYSGLAITDECSLAGVVRAHVAAKE- 64 Query: 63 FDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTRAA 122 KG L+IGS FR + PA L+ LA+NREGYGNLSELITLARTRA Sbjct: 65 --KG----LPLVIGSYFRLRNADGTPA-----FGLILLAQNREGYGNLSELITLARTRAP 113 Query: 123 KGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSWVG 182 KG Y L P DLS P +HLR +PDC ILVPD+PA+E LDAQ+ W GR+WVG Sbjct: 114 KGEYRLTPHDLSRPDRENAHLRGMPDCLAILVPDFPANEAVLDAQIEWLDETFQGRAWVG 173 Query: 183 ITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQECG 242 + R +DD+HR ++E + +P+ A+G V MH RSRK LQD +TAIR+G+PV ECG Sbjct: 174 LVLHQRAMDDIHRGSVEYVANQQNVPVVALGHVVMHVRSRKPLQDTMTAIRVGRPVHECG 233 Query: 243 HALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSAAD 302 + LAPNAEQHLRSR+R+ ++ T+ +T+++ + C FSL +LRYEYPDELVP G + Sbjct: 234 YELAPNAEQHLRSRLRIANLYPDHTVRETISVLSRCAFSLDQLRYEYPDELVPAGYTPTQ 293 Query: 303 YLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGILCQ 362 YLRQ+T GA R+P G+P V++QIE ELALIA YE YFLTVYD+V++ARS+ ILCQ Sbjct: 294 YLRQETYIGAQHRFPSGIPFNVQQQIEHELALIADLGYEPYFLTVYDIVRYARSQHILCQ 353 Query: 363 GRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHIYR 422 GRGSAANSAVCYCLGVTEVDP +LF RFIS++R EPPDIDVDFEHQRREEVIQ+IYR Sbjct: 354 GRGSAANSAVCYCLGVTEVDPARGNMLFERFISKERGEPPDIDVDFEHQRREEVIQYIYR 413 Query: 423 KYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAEAG 482 KYGR RAA+AAAV +YRPRGALRE GKALGVD +VD VAKS HWFD+ +LL RF E+G Sbjct: 414 KYGRDRAAIAAAVSTYRPRGALRETGKALGVDPQLVDTVAKSHHWFDTSHDLLKRFEESG 473 Query: 483 LDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEWDK 542 LDPE P I WA + +LL FPRHLSQH+GGFVI+RG+L+RLVP++NAAM +R VIEWDK Sbjct: 474 LDPEKPLIQAWARLAAQLLNFPRHLSQHSGGFVISRGKLTRLVPVENAAMADRSVIEWDK 533 Query: 543 DDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKADT 602 DDLE+L LLKVDVLALGML+A+RRTL+LV+ R G E +M IP ED AT++MI ADT Sbjct: 534 DDLEALGLLKVDVLALGMLSAIRRTLDLVADRTG--ERFEMQDIPAEDKATYDMISNADT 591 Query: 603 IGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGSFD 662 IGVFQIESRAQMSMLPR++P+ YDLV++VAIVRPGPIQGG VHPYLRRR+ + Sbjct: 592 IGVFQIESRAQMSMLPRLRPQKFYDLVIEVAIVRPGPIQGGAVHPYLRRRQKLE---PVS 648 Query: 663 YPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGGMG 722 YP S ++K L+RTLG+PIFQEQVM VAI AAG++P EAD LRR+MAAWKRKGG+ Sbjct: 649 YP-----SEQLKIALKRTLGVPIFQEQVMQVAILAAGFTPGEADQLRRAMAAWKRKGGLE 703 Query: 723 PHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEPEA 782 +Y+R+V GM + GY + FAE+IF+QI+GFGEYGFPESHAASFALL Y SSWLKCHEPEA Sbjct: 704 KYYDRIVNGMRERGYEQSFAEAIFEQIKGFGEYGFPESHAASFALLVYASSWLKCHEPEA 763 Query: 783 FLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRLGL 842 FL +LNSQPMGFYSPSQL+QDARRHGV+VLP +V S W+S+LE RPAVRLGL Sbjct: 764 FLAAMLNSQPMGFYSPSQLVQDARRHGVRVLPVDVTVSGWDSSLE-TIRGQQRPAVRLGL 822 Query: 843 SLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQAL 902 SLLR M AA+RIE ARA RPF V DLARRA ++R L LA +AL LAG+RR+AL Sbjct: 823 SLLRGMKDGAAERIENARAVRPFRSVHDLARRAQLNRRDLHVLADANALSSLAGNRREAL 882 Query: 903 WHAVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRPTLQRR 962 WH+V AVPD+D+L A DD +L AP E I+ DYR++ LTL RHPL LLRP L + Sbjct: 883 WHSVAAVPDKDMLSVAAVQDDTPELGAPSEAQDIVADYRSVGLTLGRHPLELLRPVLLEQ 942 Query: 963 RFMSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAVLERQR 1022 R + + L +N + A CGIVTVRQRPGTAKGV+F+T+EDETG+ NVIIWP++LERQR Sbjct: 943 RLLPASTLRDYRNGRLARGCGIVTVRQRPGTAKGVLFVTIEDETGNVNVIIWPSLLERQR 1002 Query: 1023 SEVLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 E L A LL VYG+WQC GEVRHLVA RL D +HLLG LQ SRDF Sbjct: 1003 REALGASLLAVYGTWQCEGEVRHLVAQRLVDMSHLLGGLQSTSRDF 1048 >ref|ZP_06844009.1| DNA polymerase III, alpha subunit [Burkholderia sp. Ch1-1] gb|EFG68350.1| DNA polymerase III, alpha subunit [Burkholderia sp. Ch1-1] Length = 1049 Score = 1352 bits (3498), Expect = 0.0, Method: Compositional matrix adjust. Identities = 681/1066 (63%), Positives = 807/1066 (75%), Gaps = 23/1066 (2%) Query: 3 TTLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWKEQ 62 +TLP YAEL+C SNF+FL GASHA EL +RA L Y ALA+TDEC+LAGVVRA+ A KE Sbjct: 6 STLPAYAELFCFSNFTFLHGASHAEELAERAEQLGYAALAVTDECSLAGVVRAHVAAKEA 65 Query: 63 FDKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTRAA 122 I+GS FR + PA L+ LARNREGYGNLSELITLARTRA Sbjct: 66 -------KLPFIVGSYFRLVNADGSPA-----FGLILLARNREGYGNLSELITLARTRAP 113 Query: 123 KGSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSWVG 182 KG Y L P+DLS P HLR LPDC ILVPD+PA E+ L AQ+ W GR+WVG Sbjct: 114 KGEYRLTPQDLSRPDRENRHLRGLPDCLAILVPDFPAKEDVLAAQVEWLDDTFTGRAWVG 173 Query: 183 ITRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQECG 242 + R +DD+HR ++E R +P+ A+G+V MH RSRK LQD +TAIR+ +PV ECG Sbjct: 174 LVLHQRAMDDIHRGSVEFVARNQDVPVVALGNVVMHVRSRKPLQDTMTAIRVRRPVHECG 233 Query: 243 HALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSAAD 302 + L NAEQHLRSR+RL ++ LA T+ IA+ C FSL ELRYEYPDELVP G + Sbjct: 234 YDLTQNAEQHLRSRLRLANLYPDDALAATVDIASRCAFSLDELRYEYPDELVPTGFTPTA 293 Query: 303 YLRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGILCQ 362 YLRQ+T GA +R+P G+P V+EQIE EL LIA +YE YFLTVYD+V+FARS+ ILCQ Sbjct: 294 YLRQETYIGAQRRFPSGIPHKVQEQIEHELELIADLQYEPYFLTVYDIVRFARSQSILCQ 353 Query: 363 GRGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHIYR 422 GRGSAANSAVCYCLGVTEVDP +LF RFIS++R EPPDIDVDFEHQRREEVIQ+IYR Sbjct: 354 GRGSAANSAVCYCLGVTEVDPARGNMLFERFISKERGEPPDIDVDFEHQRREEVIQYIYR 413 Query: 423 KYGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAEAG 482 KYGR RAA+AAAV +YRPRGALRE GKALGVD IVD VAKS HWFD+ ++LLARF E+G Sbjct: 414 KYGRDRAAIAAAVSTYRPRGALRETGKALGVDPQIVDVVAKSHHWFDTSQDLLARFRESG 473 Query: 483 LDPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEWDK 542 LDPE P I WA + +LL FPRHLSQH+GGFVI+RG+L+RLVP++NAAM +R VIEWDK Sbjct: 474 LDPEKPLIQAWAKLASQLLGFPRHLSQHSGGFVISRGKLTRLVPVENAAMEDRSVIEWDK 533 Query: 543 DDLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKADT 602 DDLE+L LLK+DVLALGML+A+RR L++VS +RG E +M IP EDP T+EMI ADT Sbjct: 534 DDLEALGLLKIDVLALGMLSAIRRALDIVSEQRG--ERFEMQDIPAEDPQTYEMISAADT 591 Query: 603 IGVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGSFD 662 +GVFQIESRAQMSMLPRMQPRT YDLV++VAIVRPGPIQGG VHPYL+RR+ Sbjct: 592 VGVFQIESRAQMSMLPRMQPRTFYDLVIEVAIVRPGPIQGGAVHPYLQRRQGFE---PVS 648 Query: 663 YPDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGGMG 722 YP S +K L RTLG+PIFQEQVM VAI AAG++ EAD LRR+MAAWKRKGG+ Sbjct: 649 YP-----SDALKTALGRTLGVPIFQEQVMQVAILAAGFTAGEADQLRRAMAAWKRKGGLE 703 Query: 723 PHYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEPEA 782 +Y+R+V GM + GY+ FAESIF+QI+GFGEYGFPESHAASFALL Y SSWLKCHEPEA Sbjct: 704 KYYDRIVHGMQERGYTLAFAESIFEQIKGFGEYGFPESHAASFALLVYASSWLKCHEPEA 763 Query: 783 FLCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRLGL 842 FL +LNSQPMGFYSPSQL+QDA+RHGV+VLP +V S W+S L AG RPAVRLG+ Sbjct: 764 FLAAMLNSQPMGFYSPSQLVQDAQRHGVKVLPVDVTISGWDSALVNLQGAG-RPAVRLGM 822 Query: 843 SLLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQAL 902 SLLR M AA+RIE ARA RPF V+DLARRA +DR L LA +AL LAG+RR+AL Sbjct: 823 SLLRGMKDGAAERIENARAVRPFESVNDLARRAQLDRKDLHVLADANALTSLAGNRREAL 882 Query: 903 WHAVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRPTLQRR 962 W +V AVPDRD+L +A D+ L AP E + I+ DYR++ LTL RHPL LLRP L + Sbjct: 883 WQSVAAVPDRDMLATAAVQDETPALGAPTEANDIVADYRSVGLTLGRHPLELLRPQLLAK 942 Query: 963 RFMSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAVLERQR 1022 R M + L T ++ + A CG+VTVRQRPGTAKGV+F+TLEDETG+ NVI+WP +LE+QR Sbjct: 943 RLMPASTLRTYRDGRLARGCGLVTVRQRPGTAKGVMFVTLEDETGNVNVIVWPGLLEKQR 1002 Query: 1023 SEVLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 E L A LL VYG+WQC GEVRHLVA RL D +HLLG L +R+F Sbjct: 1003 QEALGASLLAVYGTWQCQGEVRHLVAQRLVDMSHLLGTLVTSTRNF 1048 >ref|ZP_04940469.1| DNA polymerase III alpha subunit [Burkholderia cenocepacia PC184] gb|EAY63640.1| DNA polymerase III alpha subunit [Burkholderia cenocepacia PC184] Length = 1067 Score = 1340 bits (3467), Expect = 0.0, Method: Compositional matrix adjust. Identities = 675/1065 (63%), Positives = 799/1065 (75%), Gaps = 23/1065 (2%) Query: 4 TLPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWKEQF 63 +LP YAEL+C SNF+FL+GASHA ELV+RA L Y +AITDEC+LAGVVRA+ A K+ Sbjct: 25 SLPAYAELFCLSNFTFLEGASHAEELVKRAAQLGYSGIAITDECSLAGVVRAHVAAKDL- 83 Query: 64 DKGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTRAAK 123 +F L+IGS F+ T + PA L L+ LA+NREGYGNLSELITLAR R+ K Sbjct: 84 ------NFPLVIGSYFKLTQADSSPA-----LDLILLAQNREGYGNLSELITLARMRSPK 132 Query: 124 GSYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSWVGI 183 G Y L P+DL P A +HLR +P C IL+P +PA E LDAQ+ W PGR+WVG+ Sbjct: 133 GGYCLTPQDLLKPEKAYAHLRGMPGCLAILIPKFPAKPEALDAQVEWLLETFPGRAWVGL 192 Query: 184 TRLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQECGH 243 R +D+ H +E +G+P+ AVG V MH RSRK LQD +TAIR+G+PV ECG+ Sbjct: 193 CLHQRAMDNPHAGVVEHIAYGNGVPVVAVGHVTMHVRSRKPLQDTMTAIRIGKPVAECGY 252 Query: 244 ALAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSAADY 303 LAPNAEQHLRSR+RL +H P L +T+AI + C FSL ELRYEYPDELVP G++ +Y Sbjct: 253 ELAPNAEQHLRSRMRLAHLHHPNALNETVAILSRCGFSLDELRYEYPDELVPAGLTPTEY 312 Query: 304 LRQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGILCQG 363 LRQ+T GA +R+ G+P V+ Q+E EL LI + YE YFLTVYD+V+FARS GILCQG Sbjct: 313 LRQETYIGAHRRFSNGIPLNVQAQLEHELELITELSYEPYFLTVYDIVKFARSEGILCQG 372 Query: 364 RGSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHIYRK 423 RGSAANSAVCYCLG+TEVDP + +LF RFIS +R PPDIDVDFEHQ+RE V+Q+IYRK Sbjct: 373 RGSAANSAVCYCLGITEVDPARSTMLFERFISRERNSPPDIDVDFEHQKREIVMQYIYRK 432 Query: 424 YGRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAEAGL 483 YGR RAA+AAAV +YR RG LR+VGKA+GVDA IVD VAK+ HWFD +LL RF+E+GL Sbjct: 433 YGRDRAAIAAAVSTYRARGVLRDVGKAVGVDAQIVDRVAKAHHWFDGTADLLERFSESGL 492 Query: 484 DPELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEWDKD 543 DP P I WAS+ +L FPRHLSQH+GGFVI+RG+LSRLVPI+NAAM +R VI+WDKD Sbjct: 493 DPSAPIIQTWASLAAQLCGFPRHLSQHSGGFVISRGKLSRLVPIENAAMQDRSVIQWDKD 552 Query: 544 DLESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKADTI 603 DLESL LLKVDVLALGML+ +RR L+L+SL RG P +M IP EDP T++MI ADT+ Sbjct: 553 DLESLGLLKVDVLALGMLSVIRRALDLISLHRGEP--FEMQDIPSEDPETYDMISNADTV 610 Query: 604 GVFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGSFDY 663 GVFQIESRAQ SMLPR++PRT YDLV++VAIVRPGPIQGG VHPYL+RR+ + Y Sbjct: 611 GVFQIESRAQQSMLPRLKPRTFYDLVIEVAIVRPGPIQGGAVHPYLKRRQGI---DPVSY 667 Query: 664 PDNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGGMGP 723 P S ++ L RTLG+PIFQEQVM VAI AAG+SP EAD LRR+MAAWKRKGG+ P Sbjct: 668 P-----SKDLETALARTLGVPIFQEQVMQVAILAAGFSPGEADGLRRAMAAWKRKGGLEP 722 Query: 724 HYERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEPEAF 783 +++RLV GM GY REFAE+IF QI+GF +YGFPESHAASFALL Y SSWLKCHEPEAF Sbjct: 723 YHDRLVSGMLMRGYEREFAEAIFAQIKGFADYGFPESHAASFALLVYVSSWLKCHEPEAF 782 Query: 784 LCGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRLGLS 843 L LLNSQPMGFYSPSQLIQDA+RHGV VLPA+V S WES+LE P AG RP VRLGLS Sbjct: 783 LVSLLNSQPMGFYSPSQLIQDAKRHGVTVLPADVAISNWESSLEYP-EAGCRPVVRLGLS 841 Query: 844 LLRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQALW 903 LL M AEAA RIE ARA PF+ DLARRA +DR L LA DAL LAG RR ALW Sbjct: 842 LLHGMRAEAADRIEMARAVEPFSSTIDLARRAQLDRHDLHVLARSDALASLAGGRRSALW 901 Query: 904 HAVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRPTLQRRR 963 +V A PD+DLL SA D+ L EG++I DY++M LTLRRHPLALLRP L ++ Sbjct: 902 ESVVAAPDKDLLASANVVDETPDLGWASEGEEIQSDYQSMGLTLRRHPLALLRPMLHAKK 961 Query: 964 FMSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAVLERQRS 1023 M A LNT N + A CG+VTVRQRPGTAKGVIF+TLEDETG+ NVIIWP ++E QR Sbjct: 962 LMPAATLNTYPNGRLARACGLVTVRQRPGTAKGVIFVTLEDETGNVNVIIWPKLIEMQRK 1021 Query: 1024 EVLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 EVL ARLL G WQ V+HLVA RL D +HLLGEL SR+F Sbjct: 1022 EVLGARLLAALGVWQSVDGVQHLVAKRLVDLSHLLGELPTVSRNF 1066 >ref|YP_004682933.1| error-prone DNA polymerase DnaE [Cupriavidus necator N-1] gb|AEI83085.1| error-prone DNA polymerase DnaE [Cupriavidus necator N-1] Length = 1049 Score = 1320 bits (3416), Expect = 0.0, Method: Compositional matrix adjust. Identities = 660/1064 (62%), Positives = 801/1064 (75%), Gaps = 24/1064 (2%) Query: 5 LPEYAELYCRSNFSFLQGASHAHELVQRAIALDYRALAITDECTLAGVVRAYAAWKEQFD 64 LP YAEL+CRSNFSFL GAS EL +RA L Y ALAITDEC+LAG+VRA+ Sbjct: 9 LPAYAELHCRSNFSFLAGASRPEELAERAAQLGYHALAITDECSLAGIVRAHT------- 61 Query: 65 KGRTQDFKLIIGSCFRFTGLEDEPAHPLAALTLVALARNREGYGNLSELITLARTRAAKG 124 + R +L++G+ FR + PA L+ +ALARNREGYGNL ELITLAR RAAKG Sbjct: 62 EARNAGLRLVVGAWFRLQNADGSPA-----LSFLALARNREGYGNLCELITLARMRAAKG 116 Query: 125 SYLLHPEDLSGPPPALSHLRALPDCQLILVPDYPADEETLDAQLRWFAPLAPGRSWVGIT 184 Y+L P DL+ P HL+ LPDC ++ PDY E L+AQ W + GR+W+G++ Sbjct: 117 FYVLTPRDLTAPEAPSEHLKGLPDCLIVFTPDYGVAAEKLEAQSAWVSATFAGRAWMGLS 176 Query: 185 RLYRPLDDLHRAALEAATRRHGLPLAAVGDVQMHQRSRKYLQDVVTAIRLGQPVQECGHA 244 LY+P+DD+HR +EAA RH L + A G+V MH RSRK + DV+TAIR+ +PV ECG+ Sbjct: 177 LLYKPMDDIHRGTVEAAAARHHLRIVATGNVTMHVRSRKPMHDVLTAIRVHRPVPECGYD 236 Query: 245 LAPNAEQHLRSRVRLGMVHTPATLAQTLAIAADCRFSLAELRYEYPDELVPLGMSAADYL 304 L PNAEQHLRSR+RL ++ L +++ IA C+FSL ELRYEYP+E+VP G++ +DYL Sbjct: 237 LLPNAEQHLRSRLRLANIYPHRYLTESVHIANLCQFSLDELRYEYPEEVVPDGVTPSDYL 296 Query: 305 RQQTLAGAAKRYPQGLPGGVREQIEAELALIAQKEYEAYFLTVYDLVQFARSRGILCQGR 364 R + GA +RYP G+P V++Q+E ELALI YE YFLTVYD+V+FARS GILCQGR Sbjct: 297 RGEAYVGAQRRYPDGIPLAVQQQLEHELALIRDMAYEPYFLTVYDIVRFARSNGILCQGR 356 Query: 365 GSAANSAVCYCLGVTEVDPTSTRLLFARFISEKREEPPDIDVDFEHQRREEVIQHIYRKY 424 GSAANSAVCYCLG+TEVDP LLF RFIS++R EPPDIDVDFEHQRREEVIQ++YRKY Sbjct: 357 GSAANSAVCYCLGITEVDPARGNLLFERFISKERAEPPDIDVDFEHQRREEVIQYLYRKY 416 Query: 425 GRRRAALAAAVHSYRPRGALREVGKALGVDAAIVDAVAKSQHWFDSREELLARFAEAGLD 484 GR RAALAAAV +YRPR ALR+ GKALGVD AIVD VAKS HWFDS+ +LL RF E+GLD Sbjct: 417 GRDRAALAAAVTTYRPRSALRDTGKALGVDPAIVDLVAKSHHWFDSKADLLKRFGESGLD 476 Query: 485 PELPQIGLWASITGKLLRFPRHLSQHTGGFVIARGQLSRLVPIQNAAMPERCVIEWDKDD 544 P+ WA + LL FPRHLSQHTGGFV+ARG+LSRLVPI+NAAM +R VI+WDKDD Sbjct: 477 PDAELSQRWAHMAVSLLGFPRHLSQHTGGFVLARGKLSRLVPIENAAMADRSVIQWDKDD 536 Query: 545 LESLKLLKVDVLALGMLTALRRTLELVSLRRGLPEVMQMHAIPREDPATFEMICKADTIG 604 L++L LLKVDVLALGML+A+RR L+LV +RG E ++ IP EDP T+EMI +ADT+G Sbjct: 537 LDTLGLLKVDVLALGMLSAIRRALDLVMQQRG--EAFELQDIPAEDPKTYEMISRADTVG 594 Query: 605 VFQIESRAQMSMLPRMQPRTQYDLVVQVAIVRPGPIQGGMVHPYLRRRELVREGGSFDYP 664 VFQIESRAQMSMLPR++PRT YDLV++VAIVRPGP+QGGMVHPYLRRR+ + YP Sbjct: 595 VFQIESRAQMSMLPRLKPRTFYDLVIEVAIVRPGPVQGGMVHPYLRRRQGLE---PVSYP 651 Query: 665 DNTSKSGKIKKVLERTLGIPIFQEQVMDVAIEAAGYSPSEADDLRRSMAAWKRKGGMGPH 724 S ++++ L RTLG+PIFQEQVM VA+ AAG+S EAD LRR+MAAWKRKGG+ + Sbjct: 652 -----SPEMEQALSRTLGVPIFQEQVMQVAMLAAGFSAGEADQLRRAMAAWKRKGGLERY 706 Query: 725 YERLVLGMTDNGYSREFAESIFKQIEGFGEYGFPESHAASFALLTYFSSWLKCHEPEAFL 784 +ER+V GM + GY EFAESIF+QI+GFGEYGFPESHAASFALL Y S+WLKCHEP AFL Sbjct: 707 HERIVTGMLERGYDPEFAESIFRQIQGFGEYGFPESHAASFALLVYASAWLKCHEPAAFL 766 Query: 785 CGLLNSQPMGFYSPSQLIQDARRHGVQVLPANVVRSRWESTLELPSSAGARPAVRLGLSL 844 C +LNSQPMGFY+PSQL+QDA+RHGV VLP +V S W+++LE S G+ AVRLGLS Sbjct: 767 CAMLNSQPMGFYTPSQLVQDAKRHGVTVLPVDVTVSGWDASLE--SHEGSVLAVRLGLSQ 824 Query: 845 LRSMPAEAAQRIEQARAQRPFADVDDLARRAGVDRPALQALAAGDALRELAGHRRQALWH 904 LR M EAA+RIE RA RPFA V DLARRA +DR LAAG+AL L G RRQA+W Sbjct: 825 LRGMRREAAERIETTRALRPFASVKDLARRASLDRHDANVLAAGNALIGLTGSRRQAMWQ 884 Query: 905 AVGAVPDRDLLRSAPRGDDAVQLDAPGEGDQIIDDYRAMNLTLRRHPLALLRPTLQRRRF 964 A AVPD+DLLR A + +L P EG++I+ DYR++ LTL RHPLALLR L RF Sbjct: 885 AAAAVPDKDLLRPADLDEPTPELPQPTEGEEIVSDYRSLGLTLNRHPLALLRHKLAALRF 944 Query: 965 MSVADLNTLQNRQFACCCGIVTVRQRPGTAKGVIFMTLEDETGSANVIIWPAVLERQRSE 1024 + L T RQ A CGIVTVRQRP TA GV+F++LEDETG+ +VI+WP+V+E+ R E Sbjct: 945 VPADVLATYATRQIARACGIVTVRQRPSTANGVVFLSLEDETGTVSVIVWPSVMEKYRRE 1004 Query: 1025 VLNARLLGVYGSWQCHGEVRHLVAGRLEDWTHLLGELQPRSRDF 1068 VL A LLGVYG WQC GEVRHL+A R D + +LG L SR+F Sbjct: 1005 VLTASLLGVYGQWQCEGEVRHLIAQRFVDLSPMLGSLDTASRNF 1048