BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0017.p (450 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775669.1| hypothetical protein Hsero_2262 [Herbaspiril... 924 0.0 ref|YP_002354034.1| filamentation induced by cAMP protein Fic [T... 599 e-169 ref|YP_003846767.1| filamentation induced by cAMP protein Fic [G... 543 e-152 ref|ZP_02468505.1| Filamentation induced by cAMP protein Fic [Bu... 530 e-148 ref|YP_285866.1| filamentation induced by cAMP protein Fic [Dech... 282 9e-74 ref|ZP_05128221.1| filamentation induced by cAMP protein Fic [ga... 272 1e-70 ref|YP_002802041.1| filamentation induced by cAMP protein [Azoto... 270 4e-70 ref|ZP_07772773.1| filamentation induced by cAMP protein [Pseudo... 263 5e-68 ref|YP_004417397.1| hypothetical protein PT7_2233 [Pusillimonas ... 263 5e-68 gb|AAN62288.1|AF440524_75 conserved hypothetical protein [Pseudo... 260 4e-67 >ref|YP_003775669.1| hypothetical protein Hsero_2262 [Herbaspirillum seropedicae SmR1] gb|ADJ63761.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 501 Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/450 (99%), Positives = 449/450 (99%) Query: 1 LVGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDE 60 LVGHLEFALRHEGVNLEVIDAAFASAEITPAAL+AQWQAKPTGEHIRRACFLWEWLTGDE Sbjct: 52 LVGHLEFALRHEGVNLEVIDAAFASAEITPAALIAQWQAKPTGEHIRRACFLWEWLTGDE 111 Query: 61 LQVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE 120 LQVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE Sbjct: 112 LQVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE 171 Query: 121 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP 180 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP Sbjct: 172 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP 231 Query: 181 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASGRVSFFPAPAEDLEYVMRGWEDF 240 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASGRVSFFPAPAEDLEYVMRGWEDF Sbjct: 232 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASGRVSFFPAPAEDLEYVMRGWEDF 291 Query: 241 VNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPVSAV 300 VNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPVSAV Sbjct: 292 VNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPVSAV 351 Query: 301 IEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPGSRAYRFLRADREVAFLHDMVR 360 IEKNIPAY ELLTAFSRPVTALWDYRRGDQEPIVISHPGSRAYRFLRADREVAFLHDMVR Sbjct: 352 IEKNIPAYSELLTAFSRPVTALWDYRRGDQEPIVISHPGSRAYRFLRADREVAFLHDMVR 411 Query: 361 QAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRKQYGHL 420 QAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRKQYGHL Sbjct: 412 QAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRKQYGHL 471 Query: 421 PAHVLDRIEEVVGRSFQTTTDPPAPLKAAD 450 PAHVLDRIEEVVGRSFQTTTDPPAPLKAAD Sbjct: 472 PAHVLDRIEEVVGRSFQTTTDPPAPLKAAD 501 >ref|YP_002354034.1| filamentation induced by cAMP protein Fic [Thauera sp. MZ1T] gb|ACK53138.1| filamentation induced by cAMP protein Fic [Thauera sp. MZ1T] Length = 495 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 297/439 (67%), Positives = 339/439 (77%), Gaps = 3/439 (0%) Query: 1 LVGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDE 60 LVGHLEFALRHEGVNLEVIDA F + P L+A+ A P G HIRRAC LWEWLTG E Sbjct: 52 LVGHLEFALRHEGVNLEVIDALFE--HLPPQDLLARLNAAPNGAHIRRACHLWEWLTGQE 109 Query: 61 LQVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE 120 L ALP GGYVDLFP D Y TA QP KFR+RNNALGT F PVVRR+ + P L Sbjct: 110 LPAEALPAGGYVDLFPADDYVTAGQPTNDRKFRVRNNALGTADFSPVVRRAALPSAPSLP 169 Query: 121 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP 180 ELL +AR L ++ DP L+ RA++YLYLSETRSS+ IE E PS +KQERFVQLL+RAGE Sbjct: 170 ELLDKARETLASVTDPSLHERALSYLYLSETRSSFEIEREHPSSDKQERFVQLLRRAGET 229 Query: 181 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASGRVSFFPAPAEDLEYVMRGWEDF 240 ++V E WLV LQNA+VRDVYSQEASYR +QNWLEDA+GRV+FFP P +L MRGW+ F Sbjct: 230 MQVTEDWLVSLQNAVVRDVYSQEASYRTRQNWLEDATGRVTFFPVPQAELARAMRGWDAF 289 Query: 241 VNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPVSAV 300 +ND RCTD+LVK A AAFGFVYLHPF+DGNGRLHRFLI HVL S L+ GT+VPVSAV Sbjct: 290 INDDHRCTDVLVKAAAAAFGFVYLHPFMDGNGRLHRFLIHHVLTHSGLLPTGTVVPVSAV 349 Query: 301 IEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPGSRAYRFLRADREVAFLHDMVR 360 I KNIPAY E+L+ FS PVT LW Y R +E V +HPGSRAYRF A REVAFLH M++ Sbjct: 350 ILKNIPAYLEVLSGFSLPVTRLWRYVRA-EEAHVTAHPGSRAYRFFDASREVAFLHSMIQ 408 Query: 361 QAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRKQYGHL 420 QAV +EIP+ELA+L GYD AF++L+ E DLP+KDLSALIRM QSN GRLS RRKQY HL Sbjct: 409 QAVEDEIPRELAWLSGYDKAFAQLDAEFDLPRKDLSALIRMAQSNEGRLSVRRRKQYSHL 468 Query: 421 PAHVLDRIEEVVGRSFQTT 439 PA VLDR+EEVV SF T Sbjct: 469 PADVLDRVEEVVRESFGLT 487 >ref|YP_003846767.1| filamentation induced by cAMP protein Fic [Gallionella capsiferriformans ES-2] gb|ADL55003.1| filamentation induced by cAMP protein Fic [Gallionella capsiferriformans ES-2] Length = 496 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 265/441 (60%), Positives = 325/441 (73%), Gaps = 3/441 (0%) Query: 1 LVGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDE 60 + GHLEFALRHEGVNLEVIDA F + P LV + A PTG HIRR CFLWEWLTG Sbjct: 52 ITGHLEFALRHEGVNLEVIDAVFE--HLAPNELVERLAATPTGAHIRRICFLWEWLTGQS 109 Query: 61 LQVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE 120 L V A+ GGYVDLFP D Y A +PV SPKFR+R+NALGT FCP V+ + + TPP Sbjct: 110 LPVDAVSTGGYVDLFPADHYVVADEPVNSPKFRVRDNALGTRDFCPTVQLASVPTTPPFA 169 Query: 121 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP 180 +LL EA AL ++ DP LY RA++YLYLSETRS++AIE ETP+ +KQERFVQLLQ A + Sbjct: 170 DLLAEADRALASVTDPALYERALSYLYLSETRSNFAIERETPNADKQERFVQLLQHASDT 229 Query: 181 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASGRVSFFPAPAEDLEYVMRGWEDF 240 V E WLV LQN +VRDVYSQEASYR +QNWLED++GRV+FFP +D+ M+G E F Sbjct: 230 ELVTEDWLVELQNLVVRDVYSQEASYRTRQNWLEDSTGRVTFFPPAPDDMRIAMKGLEAF 289 Query: 241 VNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPVSAV 300 +N T RC + L+K A + FGFVYLHPF+DGNGRLHRFLI H LAR+ G +VPVSAV Sbjct: 290 INGT-RCRNPLLKAAASGFGFVYLHPFMDGNGRLHRFLIHHALARAHARENGVVVPVSAV 348 Query: 301 IEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPGSRAYRFLRADREVAFLHDMVR 360 + KNIP Y +L+ FS+PVT LW Y RGD PIV R+YR++ DREV FLH M++ Sbjct: 349 MLKNIPDYLSVLSGFSKPVTRLWSYTRGDITPIVTEAANGRSYRYINFDREVTFLHTMIQ 408 Query: 361 QAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRKQYGHL 420 +AV+EEIP+ELA+L GYD AF ++ + DLP KD+SALIRMIQSN+G+LS +RRKQ+ HL Sbjct: 409 KAVQEEIPRELAWLVGYDIAFQQIEAQFDLPNKDISALIRMIQSNQGKLSENRRKQFFHL 468 Query: 421 PAHVLDRIEEVVGRSFQTTTD 441 P VLD IE + +F + T+ Sbjct: 469 PNDVLDCIEAITRDAFGSETE 489 >ref|ZP_02468505.1| Filamentation induced by cAMP protein Fic [Burkholderia thailandensis MSMB43] Length = 502 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 268/444 (60%), Positives = 316/444 (71%), Gaps = 3/444 (0%) Query: 1 LVGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDE 60 LVGHLEFALRHE VNLEVIDA F + L + P G IRRACFLWEWLTG++ Sbjct: 55 LVGHLEFALRHESVNLEVIDAVFE--HLQEGELARRLSESPNGAPIRRACFLWEWLTGNQ 112 Query: 61 LQVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE 120 L V P G YVD P+D Y+TA +P +PKFR+R+N GTP FCP+VRRS + +P L+ Sbjct: 113 LSVEVAPTGSYVDALPDDEYFTAGRPTNNPKFRVRDNLPGTPDFCPLVRRSALPESPTLD 172 Query: 121 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP 180 LL EA AL+ L DP LY RAV YLYLSETRSS+ IE E PS +K ERFVQ L AGE Sbjct: 173 GLLDEAADALDRLTDPMLYARAVNYLYLSETRSSFGIEREKPSADKAERFVQSLAHAGEE 232 Query: 181 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASGRVSFFPAPAEDLEYVMRGWEDF 240 V E WLV LQN IVRDV+SQEASYR +QNWL D + RV+FFP P EDL VM GWE F Sbjct: 233 KLVTENWLVELQNVIVRDVFSQEASYRTKQNWLVDGTQRVTFFPPPPEDLRRVMAGWERF 292 Query: 241 VNDTR-RCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPVSA 299 VN+ RC + LV+ ACAAFGFVYLHPFLDGNGR+HRFLI HVL S + G +VPVSA Sbjct: 293 VNEVGLRCPEPLVRAACAAFGFVYLHPFLDGNGRIHRFLIHHVLNGSRRLRGGAIVPVSA 352 Query: 300 VIEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPGSRAYRFLRADREVAFLHDMV 359 VI ++ Y +L FS P T LW+Y GD +P+V HPGSR YRF A EV FLH M+ Sbjct: 353 VILRHEEDYANVLKGFSVPTTQLWNYFIGDPDPVVTRHPGSRPYRFFDASHEVHFLHAML 412 Query: 360 RQAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRKQYGH 419 +AVR E+P+EL++L GYD AF +L+ E DLPQ DLSALIRM++SN G+LSA++RKQY H Sbjct: 413 VEAVRTELPKELSWLGGYDEAFRQLDAEFDLPQSDLSALIRMVKSNGGKLSANKRKQYFH 472 Query: 420 LPAHVLDRIEEVVGRSFQTTTDPP 443 LP V+ RIEEVV SF + PP Sbjct: 473 LPDEVIARIEEVVRESFGNNSFPP 496 >ref|YP_285866.1| filamentation induced by cAMP protein Fic [Dechloromonas aromatica RCB] gb|AAZ47396.1| Filamentation induced by cAMP protein Fic [Dechloromonas aromatica RCB] Length = 496 Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 168/447 (37%), Positives = 244/447 (54%), Gaps = 12/447 (2%) Query: 2 VGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDEL 61 + HL FALR+EG+NL+++ A +I L+A+ + P+G IR+AC+LWEW EL Sbjct: 53 IEHLLFALRYEGINLQIL--AETMPKIAGEDLIARLRESPSGLFIRKACYLWEWFANGEL 110 Query: 62 QVAALPNGGYVDLF-PEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE 120 G Y DLF P D Y + K+RI N LG+ +CPVVR + + Sbjct: 111 SNLPAIAGPYGDLFDPAD--YVTGIVRKDAKWRINFNGLGSAEYCPVVRLTQLVKDGIAS 168 Query: 121 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP 180 ++L + LE+L P R +++ YLSET SS+AIE E PS +K E FV LLQ+A E Sbjct: 169 DVLGRTKAFLESL-GPTNADRTLSWAYLSETDSSFAIEREAPSQSKAETFVALLQQAHEK 227 Query: 181 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASG----RVSFFPAPAEDLEYVMRG 236 +E+ E++L LQ+A + + Y + A +RH+QNWL V++ P E L +M Sbjct: 228 IELTEEYLADLQSATISNPYEKAACFRHEQNWLRGGGLRGAGSVTYIPPSPELLSKLMPA 287 Query: 237 WEDFVNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVP 296 + D N R +D +V + A+FGFVYLHPF+DGNGRL RFL H L +S + G L+P Sbjct: 288 FMDMANSLPRQSDPVVAASVASFGFVYLHPFMDGNGRLSRFLFHHALCQSGRLDQGLLLP 347 Query: 297 VSAVIEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPGSRA-YRFLRADREVAFL 355 VS ++++ Y E L +FS+P LWD D++ G+ + YRF A + V F Sbjct: 348 VSVAMKRHETEYLEALQSFSKPARKLWDVYWADEDLFDFKFKGADSIYRFWDATKCVEFG 407 Query: 356 HDMVRQAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRK 415 + M QA+ ++ QE +L +D +NDE D+ DL LI N GR+S +RRK Sbjct: 408 YRMAEQALGVDLRQETEFLASFDRISKAVNDEFDIRGNDLHLLIVSALQNGGRVSNNRRK 467 Query: 416 QY-GHLPAHVLDRIEEVVGRSFQTTTD 441 + G +P D +E + D Sbjct: 468 KLAGRVPEEAFDFVERLAKTELTELND 494 >ref|ZP_05128221.1| filamentation induced by cAMP protein Fic [gamma proteobacterium NOR5-3] gb|EED32249.1| filamentation induced by cAMP protein Fic [gamma proteobacterium NOR5-3] Length = 512 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 163/462 (35%), Positives = 252/462 (54%), Gaps = 28/462 (6%) Query: 1 LVGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAK-PTGEHIRRACFLWEWLTGD 59 L HL+FALR+EGVNL+++ F + T + + W + PT + RRACFL+EWLTG Sbjct: 57 LTAHLQFALRYEGVNLQLLRLLF---QTTDSQRLCDWIIESPTSAYARRACFLYEWLTGT 113 Query: 60 ELQVAA-LP-NGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTP 117 +L + +P Y+D+ D+ + +++ +FRI +N GT FCP+VR++ Sbjct: 114 QLPIENPVPAKTRYIDVLDTDMQFGTDAVIKNARFRINDNLPGTRDFCPLVRKTEFLIEM 173 Query: 118 PLEELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRA 177 ++L K R L D +L RRA A+LYL ET+SS+ +E E PS N+ +RF LL++A Sbjct: 174 VGKDLRKRTRETLGNY-DQDLLRRAAAFLYLKETQSSFEVEREKPSANRAQRFADLLRKA 232 Query: 178 GEPVEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASG---RVSFFPAPAEDLEYVM 234 +NE+ LV LQNA++ D E ++RHQQNW+ D G +V F PA ED+ +M Sbjct: 233 DTGQPLNEERLVELQNAVI-DPRFHEFTWRHQQNWIGDDLGYRQKVEFVPARPEDVPALM 291 Query: 235 RGWEDFVNDTRRCT---------------DLLVKTACAAFGFVYLHPFLDGNGRLHRFLI 279 +G D R D ++ A AFGFV++HPF+DGNGR+HR+LI Sbjct: 292 QGLLDTAAKARMSVEPANKEGGADVALQFDPVIYAAIIAFGFVFIHPFMDGNGRIHRYLI 351 Query: 280 QHVLARSTLMAPGTLVPVSAVIEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPG 339 VLA + G ++PVSAVI N+ Y +L +FS+P+ DY + I + Sbjct: 352 HEVLANAGFTPRGIVLPVSAVILANLDEYVTVLESFSKPLQQRTDYLPDAPDTPAIGNDA 411 Query: 340 SRAYRFLRADREVAFLHDMVRQAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALI 399 +++ A + FL+ + + V ++ QE+ +L G+D A LN LD P L + Sbjct: 412 V-YFKYFDATDQAEFLYRSLERTVENDLQQEIEFLLGFDRACHNLNQLLDWPNHSLELFV 470 Query: 400 RMIQSNRGRLSAHRRK-QYGHLPAHVLDRIEEVVGRSFQTTT 440 R++ N LS ++++ +G + + R E +V +F T Sbjct: 471 RVVHQNDNTLSKNKKQSHFGWMTEVEVSRAETIVAEAFAKKT 512 >ref|YP_002802041.1| filamentation induced by cAMP protein [Azotobacter vinelandii DJ] gb|ACO81066.1| filamentation induced by cAMP protein [Azotobacter vinelandii DJ] Length = 509 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 167/439 (38%), Positives = 241/439 (54%), Gaps = 19/439 (4%) Query: 2 VGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDEL 61 H+ FAL+HEGVNL V+ A A +I A ++A+ + P+G +IR+ACFLWE +G L Sbjct: 55 CAHVLFALKHEGVNLGVL--AQALPQIPAATMLAELRKAPSGAYIRKACFLWEAFSGTRL 112 Query: 62 QVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE- 120 P G LF D Y T R ++R+ N LGT +C V R TP +E Sbjct: 113 PHDVSPKGAATLLFDPDRYITGPA-RRDTRWRVDFNGLGTLHYCATVER-----TPEIEA 166 Query: 121 ----ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQR 176 ++L ++R + +L + RA+++ YL ET S+AIE E PS +K ERFVQLL++ Sbjct: 167 LLALDILGKSREFIGSLP-AGMMDRALSWAYLHETHDSFAIEREAPSADKAERFVQLLRQ 225 Query: 177 AGEPVEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDA---SGRVSFFPAPAEDLEYV 233 A E + E +LV LQN+ + + + + ++RH+QN L + + V++ P P E + Sbjct: 226 AHERQPLTEDYLVALQNSTISNPFDRAVAFRHEQNHLNNGLRGAAGVTYVPPPPELCRDL 285 Query: 234 MRGWEDFVNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGT 293 M F N+ D LV + +FGFV+LHPF+DGNGRL RFLI L RS M+ G Sbjct: 286 MDELMLFANEAPLQIDPLVASGIISFGFVFLHPFMDGNGRLSRFLIHQALCRSGAMSHGL 345 Query: 294 LVPVSAVIEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPGSRA-YRFLRADREV 352 L+PVS +++ Y E L +FSRP W D + G+ YR+ A V Sbjct: 346 LLPVSVAMKREEQRYLEALQSFSRPAREFWRVLWLDANDLSFEFTGNEGIYRYWDATACV 405 Query: 353 AFLHDMVRQAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAH 412 AF +M RQA+ E+ +E +L YD F +N D+ DL+ L+ M SN G +S + Sbjct: 406 AFTLEMARQALEVELHEETEFLHAYDQVFKVVNARFDVRGSDLAQLVMMCLSNNGIVSRN 465 Query: 413 RRKQYGH-LPAHVLDRIEE 430 RRKQ+ + +P V D IEE Sbjct: 466 RRKQFQYSVPEEVFDFIEE 484 >ref|ZP_07772773.1| filamentation induced by cAMP protein [Pseudomonas fluorescens WH6] gb|EFQ66076.1| filamentation induced by cAMP protein [Pseudomonas fluorescens WH6] Length = 497 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 166/450 (36%), Positives = 233/450 (51%), Gaps = 13/450 (2%) Query: 1 LVGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDE 60 L H+ FAL+HEGVNL V+ F + P +A P G IR+ACFLWE LTG Sbjct: 52 LFDHVLFALKHEGVNLAVLAQVFE--RLGPEPFLAGLMESPNGAFIRKACFLWEGLTGRV 109 Query: 61 LQVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE 120 L + G V LF + Y T +R+ ++R+ N LG+ +C V R+ Sbjct: 110 LDYSMPVRGRVVALFDPERYVTGPS-IRNSRWRVDFNGLGSLHYCATVERTPELAALLAL 168 Query: 121 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP 180 +L A+ + L PE+ RA+ + YL ETR S+AIE E PS K RFVQLL++A E Sbjct: 169 NVLDRAKSFMATLP-PEMMDRAIQWAYLHETRDSFAIEKEQPSEEKSRRFVQLLRQAHEG 227 Query: 181 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDA---SGRVSFFPAPAEDLEYVMRGW 237 + E +LV LQN+ V + + + ++RH+QN L + + VS+ P + +M Sbjct: 228 RLLTEDYLVELQNSTVSNPFDKTVAFRHEQNHLHNGLRGAAGVSYVPPAPALCQELMEEL 287 Query: 238 EDFVNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPV 297 F N R D LV A AFGFV+LHPF+DGNGRL RFLI L + G L+PV Sbjct: 288 MAFSNQPVRGVDPLVAAAVTAFGFVFLHPFMDGNGRLSRFLIHQTLCHYGALENGLLLPV 347 Query: 298 SAVIEKNIPAYGELLTAFSRPVTALWD--YRRGDQEPI-VISHPGSRAYRFLRADREVAF 354 S ++ AY E L FS+P W+ + GDQ I HP YR+ A V F Sbjct: 348 SVAMKHEEQAYLEALKGFSQPTRDFWNVTWLDGDQMAFDFIGHPS--IYRYWDATCCVEF 405 Query: 355 LHDMVRQAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRR 414 M R+A+ E+ +E +L YD +N D+ DLS L+ M + G++S HRR Sbjct: 406 TLQMARRALEVELREETEFLDRYDRVIKAVNQRFDVRGSDLSRLVMMCLDHEGKVSKHRR 465 Query: 415 KQYGH-LPAHVLDRIEEVVGRSFQTTTDPP 443 KQ+ + + V + IE+ VG + + P Sbjct: 466 KQFQYSVSEEVFEFIEQEVGHALREIGKFP 495 >ref|YP_004417397.1| hypothetical protein PT7_2233 [Pusillimonas sp. T7-7] gb|AEC20773.1| hypothetical protein PT7_2233 [Pusillimonas sp. T7-7] Length = 491 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 158/437 (36%), Positives = 245/437 (56%), Gaps = 11/437 (2%) Query: 2 VGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDEL 61 +GHL FAL+HEGVNL ++ A A +I + L A+ + P G +IR+ACFL+E T ++L Sbjct: 53 LGHLLFALKHEGVNLAIL--AQALPQIPASILEAELERTPNGIYIRKACFLYEAFTKEKL 110 Query: 62 QVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLEE 121 + G +V LF D+Y T R+ ++R+ N +GT A+C V R+ + Sbjct: 111 NQHSPVRGAFVPLFDPDLYVTMPGE-RNSRWRVEFNGIGTFAYCATVERTPEIAALLEHD 169 Query: 122 LLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEPV 181 +L + ++ L E+ RA+ + YL ET+ S+AIE E+PS +K +F+QLL++A E + Sbjct: 170 ILARTQDFMQGLPS-EMMDRAINWAYLHETQDSFAIEKESPSEDKARKFIQLLRQAHERI 228 Query: 182 EVNEQWLVGLQNAIVRDVYSQEASYRHQQNWL----EDASGRVSFFPAPAEDLEYVMRGW 237 ++E +LV LQNA + + + ++RH+QN+L + A+G V++ P + +M Sbjct: 229 PLSEDYLVHLQNATISNPFDMATAFRHEQNYLASGLQGAAG-VTYVPPEPDLCRELMEQL 287 Query: 238 EDFVNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPV 297 N D LV +FGFV+LHPF+DGNGRL RFLI +L R+ + G L+PV Sbjct: 288 IALGNGAPARIDPLVAAGIISFGFVFLHPFMDGNGRLSRFLIHQILCRAGALENGLLLPV 347 Query: 298 SAVIEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPG-SRAYRFLRADREVAFLH 356 S ++ Y E L FSRP WD R DQ G + YRF A V F Sbjct: 348 SVAMKHEERLYLETLQQFSRPAREFWDVRWIDQGQYSFDFTGAAEIYRFWDATPCVRFTL 407 Query: 357 DMVRQAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRKQ 416 +M ++A+ E+ +E+ +L+ YD +N+ D+ DL++L+ M +N G +S +RRKQ Sbjct: 408 EMAKRALEVELHEEMIFLERYDQVMRTVNETYDVRGSDLASLVMMCLTNNGTVSKNRRKQ 467 Query: 417 YGH-LPAHVLDRIEEVV 432 Y + + V D IE+V Sbjct: 468 YQYSVQPEVFDYIEQVT 484 >gb|AAN62288.1|AF440524_75 conserved hypothetical protein [Pseudomonas aeruginosa] Length = 501 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 167/436 (38%), Positives = 238/436 (54%), Gaps = 9/436 (2%) Query: 1 LVGHLEFALRHEGVNLEVIDAAFASAEITPAALVAQWQAKPTGEHIRRACFLWEWLTGDE 60 L+GH+ FAL+HEG+NL V+ A A I AA +QA P G +IR+AC+L E TG+ Sbjct: 53 LLGHVLFALKHEGLNLAVL--AQALPRIPAAAFEQAYQAAPNGIYIRKACYLREAFTGEP 110 Query: 61 LQVAALPNGGYVDLFPEDIYYTAAQPVRSPKFRIRNNALGTPAFCPVVRRSVMSCTPPLE 120 + A Y LF + Y T R+ K+RI N LG +C V R+ + Sbjct: 111 IAQHAPVRVPYSPLFDPERYITRPGE-RNAKWRIEFNGLGDLTYCATVERTPLITELLAH 169 Query: 121 ELLKEARHALEALEDPELYRRAVAYLYLSETRSSYAIESETPSFNKQERFVQLLQRAGEP 180 ++L A+ +E+L P + RA+ + YL ET+ S+AIE E P+ +K RF+QLL++A E Sbjct: 170 DILGRAKAFIESLP-PIMMDRALNWAYLHETKDSFAIEREAPTEDKSRRFIQLLRQAHER 228 Query: 181 VEVNEQWLVGLQNAIVRDVYSQEASYRHQQNWLEDASGR---VSFFPAPAEDLEYVMRGW 237 + E +LV LQNA V + A++RH+QN L D + V++ P P E +M Sbjct: 229 QPLTEDYLVSLQNATVSNPLDMAAAFRHEQNHLSDGTQGAVGVTYLPPPPELCRELMESL 288 Query: 238 EDFVNDTRRCTDLLVKTACAAFGFVYLHPFLDGNGRLHRFLIQHVLARSTLMAPGTLVPV 297 F N+ D LV +FGFV +HPF+DGNGRL RFLI L R+ + G L+PV Sbjct: 289 MGFANEAPTQIDPLVAAGIISFGFVLIHPFMDGNGRLSRFLIHQALCRAGALENGLLLPV 348 Query: 298 SAVIEKNIPAYGELLTAFSRPVTALWDYRRGDQEPIVISHPG-SRAYRFLRADREVAFLH 356 S +++ Y E L +FSRPV WD + D G S YRF A VAF Sbjct: 349 SVAMKRQERQYLETLQSFSRPVRDFWDVQWIDFGQYGFEFRGDSVVYRFWDATPCVAFTL 408 Query: 357 DMVRQAVREEIPQELAYLKGYDAAFSELNDELDLPQKDLSALIRMIQSNRGRLSAHRRKQ 416 +M R A+ E+ +E A+L YD + +++ DL DL+ L+ M SN G +S +RRKQ Sbjct: 409 EMARVALEVELHKETAFLACYDTVYRAVDERYDLRGSDLANLVMMCLSNDGIVSNNRRKQ 468 Query: 417 YGHLPA-HVLDRIEEV 431 Y + A V + IE++ Sbjct: 469 YQYRVAEEVFNFIEQM 484