BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0012.p (170 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775671.1| CBS domain-containing protein [Herbaspirillu... 337 5e-91 ref|YP_002553278.1| cbs domain-containing protein [Acidovorax eb... 151 3e-35 ref|YP_549010.1| signal transduction protein [Polaromonas sp. JS... 150 8e-35 ref|YP_002943913.1| signal transduction protein with CBS domains... 147 5e-34 ref|YP_986264.1| CBS domain-containing protein [Acidovorax sp. J... 146 8e-34 ref|YP_002942626.1| CBS domain containing protein [Variovorax pa... 140 8e-32 ref|YP_003449633.1| CBS domain-containing protein [Azospirillum ... 132 1e-29 ref|YP_004617621.1| hypothetical protein Rta_05260 [Ramlibacter ... 131 3e-29 ref|YP_984273.1| signal-transduction protein [Polaromonas naphth... 124 6e-27 ref|YP_001115071.1| CBS domain-containing protein [Burkholderia ... 121 3e-26 >ref|YP_003775671.1| CBS domain-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ63763.1| CBS domain containing protein [Herbaspirillum seropedicae SmR1] Length = 170 Score = 337 bits (863), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 169/170 (99%), Positives = 169/170 (99%) Query: 1 MHATRTIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLR 60 MHATRTIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQ LVGLVTDRDIVLR Sbjct: 1 MHATRTIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQRLVGLVTDRDIVLR 60 Query: 61 GVARKRLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSL 120 GVARKRLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSL Sbjct: 61 GVARKRLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSL 120 Query: 121 GDVAAKTQNSGIAGALAEISLPAAPLRPDDDFRLPEVSQGDLAEVNLGRS 170 GDVAAKTQNSGIAGALAEISLPAAPLRPDDDFRLPEVSQGDLAEVNLGRS Sbjct: 121 GDVAAKTQNSGIAGALAEISLPAAPLRPDDDFRLPEVSQGDLAEVNLGRS 170 >ref|YP_002553278.1| cbs domain-containing protein [Acidovorax ebreus TPSY] gb|ACM33278.1| CBS domain containing protein [Acidovorax ebreus TPSY] Length = 157 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 78/143 (54%), Positives = 103/143 (72%), Gaps = 3/143 (2%) Query: 5 RTIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVAR 64 + ++DVMTRG+ T+ PDDT+ AAQAM L+VGALPVCDG + LVG+VTDRD+VLRG+A Sbjct: 2 QNVSDVMTRGIRTMAPDDTLTTAAQAMRELNVGALPVCDG-ERLVGMVTDRDMVLRGLAE 60 Query: 65 KRLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVA 124 +R + L EVMS +V +CYED+PVD+ + M Q+RRLPV+DR + LVG+VSLGDVA Sbjct: 61 ERTH--SRLNEVMSREVYYCYEDQPVDEAIASMRDMQVRRLPVVDRDQRLVGIVSLGDVA 118 Query: 125 AKTQNSGIAGALAEISLPAAPLR 147 A+ +IS P+ P R Sbjct: 119 TNVDERQSGTAIRDISSPSEPDR 141 >ref|YP_549010.1| signal transduction protein [Polaromonas sp. JS666] gb|ABE44112.1| putative signal transduction protein with CBS domains [Polaromonas sp. JS666] Length = 170 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 80/146 (54%), Positives = 111/146 (76%), Gaps = 3/146 (2%) Query: 6 TIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARK 65 T++D+MTRGV TL P DTV AA+AM+ L+VG +PVCDG + LVG+VTDRDIV+RGVA++ Sbjct: 3 TVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCDG-EKLVGMVTDRDIVVRGVAQE 61 Query: 66 RLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 +TT L+++MS +V E+E VD+VL +M + QIRRLPV+D Q LVG++SLGD+AA Sbjct: 62 LDAKTTDLSDLMSTNVRTARENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDIAA 121 Query: 126 K--TQNSGIAGALAEISLPAAPLRPD 149 K +++ +A +L ISLPA P R + Sbjct: 122 KDPDKDADVAASLGNISLPAEPDRSN 147 >ref|YP_002943913.1| signal transduction protein with CBS domains [Variovorax paradoxus S110] gb|ACS18647.1| putative signal transduction protein with CBS domains [Variovorax paradoxus S110] Length = 157 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 80/141 (56%), Positives = 102/141 (72%), Gaps = 2/141 (1%) Query: 7 IADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKR 66 ++++MTRGV TL P DTV AAQAM+ LD+GA+PVCDG Q L+G+VTDRDIVLR VA+ R Sbjct: 4 VSELMTRGVRTLSPSDTVALAAQAMDELDIGAIPVCDG-QRLLGMVTDRDIVLRVVAQTR 62 Query: 67 LTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAAK 126 +T L+EVMS DV WC E++ V+ V+D+M Q+RR+PV+DR + LVGM+SLGD AAK Sbjct: 63 PLDTA-LSEVMSKDVKWCSENDNVETVMDEMAGYQVRRMPVVDRGRRLVGMLSLGDTAAK 121 Query: 127 TQNSGIAGALAEISLPAAPLR 147 L IS PA P R Sbjct: 122 GDIGKAGDTLNIISQPAEPDR 142 >ref|YP_986264.1| CBS domain-containing protein [Acidovorax sp. JS42] gb|ABM42188.1| CBS domain containing protein [Acidovorax sp. JS42] Length = 157 Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 75/143 (52%), Positives = 102/143 (71%), Gaps = 3/143 (2%) Query: 5 RTIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVAR 64 + ++DVMTRG+ T+ PDDT+ AAQAM L+VGALPVC+G + LVG+VTDRD+VLRG+A Sbjct: 2 QNVSDVMTRGIRTMAPDDTLTTAAQAMRELNVGALPVCNG-ERLVGMVTDRDMVLRGLAE 60 Query: 65 KRLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVA 124 +R + L EVM +V +CYED+PVD+ + M Q+RRLPV+DR + +VG+VSLGDVA Sbjct: 61 ERTH--SRLNEVMFREVYYCYEDQPVDEAIASMRAMQVRRLPVVDRDQRVVGIVSLGDVA 118 Query: 125 AKTQNSGIAGALAEISLPAAPLR 147 A+ +IS P+ P R Sbjct: 119 TNVDERQSGTAIRDISSPSEPDR 141 >ref|YP_002942626.1| CBS domain containing protein [Variovorax paradoxus S110] gb|ACS17360.1| CBS domain containing protein [Variovorax paradoxus S110] Length = 144 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 76/139 (54%), Positives = 101/139 (72%), Gaps = 1/139 (0%) Query: 7 IADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKR 66 + +VMTRGV T+ P DT+++AA+A+E L+VG LPVCDG + LVG+VTDRDI +RGVAR+ Sbjct: 4 VHEVMTRGVRTVAPGDTIVQAAKALEELEVGVLPVCDGSR-LVGVVTDRDIAVRGVAREI 62 Query: 67 LTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAAK 126 +P+ ++M+ D WCY D+ VD+ L M QIRRLPV+DR K LVG++SLGDVAAK Sbjct: 63 DLGASPVKQIMTADAYWCYADDTVDEALSQMSAVQIRRLPVVDRDKRLVGILSLGDVAAK 122 Query: 127 TQNSGIAGALAEISLPAAP 145 + A L +IS PA P Sbjct: 123 GEAGAAADPLGKISEPARP 141 >ref|YP_003449633.1| CBS domain-containing protein [Azospirillum sp. B510] dbj|BAI73089.1| CBS domain-containing protein [Azospirillum sp. B510] Length = 162 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/143 (48%), Positives = 98/143 (68%), Gaps = 2/143 (1%) Query: 7 IADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARKR 66 I ++MTR V T++PDD++ RAAQ M+ L+VG LPVCDG + LVG+VTDRDI +R ++ + Sbjct: 20 IREIMTRDVQTVRPDDSIRRAAQLMDQLNVGILPVCDG-RDLVGVVTDRDITIRAISAGK 78 Query: 67 LTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAAK 126 + + EVM+ + +CYED+PV V + M +QIRR+PV+DR L G+VSLGD+A Sbjct: 79 QPDRCKVAEVMTANPRYCYEDDPVGSVTELMAGQQIRRVPVVDRNDRLTGIVSLGDLAGN 138 Query: 127 TQN-SGIAGALAEISLPAAPLRP 148 +N + AL IS P+ P RP Sbjct: 139 AKNDRAVQDALERISSPSQPDRP 161 >ref|YP_004617621.1| hypothetical protein Rta_05260 [Ramlibacter tataouinensis TTB310] gb|AEG91602.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310] Length = 164 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 72/144 (50%), Positives = 104/144 (72%), Gaps = 3/144 (2%) Query: 6 TIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARK 65 T+A++MTR V ++ P DT+++AAQ M+ L+VG +PVC+G + LVG+VTDRDIV+RG+AR+ Sbjct: 3 TVAEIMTREVRSMTPQDTLVQAAQVMDELNVGVVPVCEG-ERLVGMVTDRDIVVRGLARE 61 Query: 66 RLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 ++ L +VMS V E++ VD+VL +M QIRR+PV+D Q+ LVG+VSLGD+AA Sbjct: 62 LDPKSCKLADVMSGHVRTVRENDDVDEVLSEMATAQIRRMPVVDAQERLVGIVSLGDIAA 121 Query: 126 K--TQNSGIAGALAEISLPAAPLR 147 K +A +L +IS PA P R Sbjct: 122 KDPEDEVDVAMSLGDISSPAEPDR 145 >ref|YP_984273.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2] gb|ABM39352.1| putative signal-transduction protein with CBS domains [Polaromonas naphthalenivorans CJ2] Length = 145 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 78/144 (54%), Positives = 106/144 (73%), Gaps = 3/144 (2%) Query: 6 TIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARK 65 T+++VMTRG +L+P DTV++AAQAME L+VG +PVC GD+ L+G+VTDRDIV+RGVA+ Sbjct: 3 TVSEVMTRGARSLRPTDTVVQAAQAMEELNVGVIPVCAGDK-LIGMVTDRDIVVRGVAQG 61 Query: 66 RLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 +TT L +VMS V ED+ V+DVLD M + QIRR+PV+D Q L+G++S+GD+AA Sbjct: 62 LDAKTTTLADVMSSHVRTVREDDDVEDVLDIMGENQIRRMPVVDAQDRLIGILSIGDIAA 121 Query: 126 KTQNSGI--AGALAEISLPAAPLR 147 K + I A +L IS PA P R Sbjct: 122 KDPDVDIDVANSLGNISSPAEPDR 145 >ref|YP_001115071.1| CBS domain-containing protein [Burkholderia vietnamiensis G4] gb|ABO58816.1| CBS domain containing protein [Burkholderia vietnamiensis G4] Length = 141 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/142 (45%), Positives = 96/142 (67%), Gaps = 3/142 (2%) Query: 6 TIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQHLVGLVTDRDIVLRGVARK 65 ++++VMTR T+ P T+ AAQ M+AL+VGALPVCDG L+G++TDRDIV+R V+ Sbjct: 3 SVSEVMTRDAATIAPTQTLREAAQMMDALNVGALPVCDG-TRLIGMLTDRDIVVRAVSMG 61 Query: 66 RLTETTPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGDVAA 125 + P+ V+S WCYED+ + V + M + QIRR+PV+DR K LVG+V+LGD+ A Sbjct: 62 -VRPDEPIEGVVSGPANWCYEDDDISAVQNKMAEAQIRRVPVVDRDKRLVGIVALGDL-A 119 Query: 126 KTQNSGIAGALAEISLPAAPLR 147 + + G++ L +S P+ P R Sbjct: 120 TSADGGMSSTLGAVSAPSKPER 141