BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0011.p (111 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775672.1| hypothetical protein Hsero_2265 [Herbaspiril... 209 8e-53 ref|YP_002363834.1| small membrane protein [Methylocella silvest... 105 2e-21 ref|YP_004663735.1| hypothetical protein LILAB_03660 [Myxococcus... 96 2e-18 ref|YP_003269413.1| hypothetical protein Hoch_5032 [Haliangium o... 96 2e-18 ref|YP_001618127.1| small membrane protein [Sorangium cellulosum... 96 3e-18 ref|YP_629268.1| hypothetical protein MXAN_1007 [Myxococcus xant... 93 1e-17 ref|YP_363813.1| hypothetical protein XCV2082 [Xanthomonas campe... 92 3e-17 ref|YP_004851630.1| hypothetical protein XACM_2060 [Xanthomonas ... 92 4e-17 ref|YP_466611.1| hypothetical protein Adeh_3407 [Anaeromyxobacte... 91 4e-17 ref|NP_642357.1| hypothetical protein XAC2031 [Xanthomonas axono... 90 9e-17 >ref|YP_003775672.1| hypothetical protein Hsero_2265 [Herbaspirillum seropedicae SmR1] gb|ADJ63764.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 106 Score = 209 bits (533), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 105/106 (99%), Positives = 105/106 (99%) Query: 6 MVHHGGTDFSTLPILTMSEHITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAG 65 MVHHGGTDFSTLPILTMSEHITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAG Sbjct: 1 MVHHGGTDFSTLPILTMSEHITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAG 60 Query: 66 QLAASAGFVTYSLLQGDWVFVVSNVFLLFTALLGQVLYLRNRRRQG 111 LAASAGFVTYSLLQGDWVFVVSNVFLLFTALLGQVLYLRNRRRQG Sbjct: 61 PLAASAGFVTYSLLQGDWVFVVSNVFLLFTALLGQVLYLRNRRRQG 106 >ref|YP_002363834.1| small membrane protein [Methylocella silvestris BL2] gb|ACK52472.1| small membrane protein [Methylocella silvestris BL2] Length = 86 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 50/83 (60%), Positives = 61/83 (73%) Query: 26 ITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWVF 85 +T+L+GW A ILLLTI QVY QWR RS++GVS WLF GQ+ AS GFV YS L G WVF Sbjct: 1 MTELVGWSAAAILLLTICRQVYTQWRDRSSEGVSRWLFIGQITASIGFVIYSWLLGSWVF 60 Query: 86 VVSNVFLLFTALLGQVLYLRNRR 108 V +N +L TA+ GQ ++ RNRR Sbjct: 61 VATNAAMLLTAVAGQAIHSRNRR 83 >ref|YP_004663735.1| hypothetical protein LILAB_03660 [Myxococcus fulvus HW-1] gb|AEI62657.1| hypothetical protein LILAB_03660 [Myxococcus fulvus HW-1] Length = 103 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 43/82 (52%), Positives = 63/82 (76%) Query: 27 TDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWVFV 86 + +GW ++ +LLLTI++QVY+QW+S S++GVS WLF GQ+ AS GF YS G+WVFV Sbjct: 3 AEALGWFSSFVLLLTIATQVYKQWKSGSSEGVSKWLFVGQMTASVGFTLYSWQVGNWVFV 62 Query: 87 VSNVFLLFTALLGQVLYLRNRR 108 V+N +L +A+LG V+ L++RR Sbjct: 63 VTNALMLLSAVLGAVIVLKHRR 84 >ref|YP_003269413.1| hypothetical protein Hoch_5032 [Haliangium ochraceum DSM 14365] gb|ACY17520.1| hypothetical protein Hoch_5032 [Haliangium ochraceum DSM 14365] Length = 120 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 1/85 (1%) Query: 27 TDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWVFV 86 T++ GW +++IL LTISSQVY+QWR+ QGVSHWLF GQL ASAGF YS L G+WVF+ Sbjct: 3 TEIFGWCSSVILFLTISSQVYKQWRTGMGQGVSHWLFIGQLTASAGFTVYSALLGNWVFI 62 Query: 87 VSNVFLLFTALLG-QVLYLRNRRRQ 110 V+N + +A++G +L R R + Sbjct: 63 VTNALMSVSAMVGLYILVFRCERDE 87 >ref|YP_001618127.1| small membrane protein [Sorangium cellulosum 'So ce 56'] emb|CAN97647.1| small membrane protein [Sorangium cellulosum 'So ce 56'] Length = 155 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 46/85 (54%), Positives = 63/85 (74%), Gaps = 1/85 (1%) Query: 26 ITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWVF 85 + D IGW ++ IL+LTI +QVY+QWRS+++QG+S WLF GQLAAS GFV YS + WVF Sbjct: 1 MKDAIGWVSSGILVLTIGNQVYKQWRSKTSQGISRWLFIGQLAASIGFVIYSWMLDSWVF 60 Query: 86 VVSNVFLLFTALLGQ-VLYLRNRRR 109 V +N ++ AL G ++YL+ RRR Sbjct: 61 VATNSLMVANALAGATIVYLQRRRR 85 >ref|YP_629268.1| hypothetical protein MXAN_1007 [Myxococcus xanthus DK 1622] gb|ABF87077.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 103 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/81 (51%), Positives = 62/81 (76%) Query: 28 DLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWVFVV 87 + +GW ++ +LLLTI+ QV++QW+S S++GVS WLF GQ+ AS GF YS G+WVFVV Sbjct: 4 EALGWFSSFVLLLTIAVQVHKQWKSGSSEGVSKWLFVGQMTASVGFTLYSWKVGNWVFVV 63 Query: 88 SNVFLLFTALLGQVLYLRNRR 108 +N +L +A+LG V+ L++RR Sbjct: 64 TNALMLLSAVLGAVIVLKHRR 84 >ref|YP_363813.1| hypothetical protein XCV2082 [Xanthomonas campestris pv. vesicatoria str. 85-10] ref|ZP_08188865.1| hypothetical protein XPE_2892 [Xanthomonas perforans 91-118] emb|CAJ23759.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gb|EGD13516.1| hypothetical protein XPE_2892 [Xanthomonas perforans 91-118] Length = 91 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 60/85 (70%) Query: 25 HITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWV 84 D++GW A++IL+ T+ Q+Y+QWRS + QGVS WLF GQ++AS F+ YS L G+ V Sbjct: 2 QFVDVVGWLASIILIATLIRQIYKQWRSDAAQGVSRWLFLGQISASVLFILYSYLVGNAV 61 Query: 85 FVVSNVFLLFTALLGQVLYLRNRRR 109 F+VSNV +L TAL+G L RRR Sbjct: 62 FIVSNVLILLTALIGYALQRVKRRR 86 >ref|YP_004851630.1| hypothetical protein XACM_2060 [Xanthomonas axonopodis pv. citrumelo F1] gb|AEO42332.1| hypothetical protein XACM_2060 [Xanthomonas axonopodis pv. citrumelo F1] Length = 91 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 60/85 (70%) Query: 25 HITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWV 84 D++GW A++IL++T+ Q+Y+QWRS + QGVS WLF GQ++AS F+ YS L G+ V Sbjct: 2 QFVDVVGWLASIILIVTLIRQIYKQWRSDAAQGVSRWLFLGQISASVLFILYSYLVGNAV 61 Query: 85 FVVSNVFLLFTALLGQVLYLRNRRR 109 F+VSNV +L TAL G L RRR Sbjct: 62 FIVSNVLILLTALTGYALQRVKRRR 86 >ref|YP_466611.1| hypothetical protein Adeh_3407 [Anaeromyxobacter dehalogenans 2CP-C] ref|YP_002135832.1| hypothetical protein AnaeK_3490 [Anaeromyxobacter sp. K] ref|YP_002493950.1| hypothetical protein A2cp1_3554 [Anaeromyxobacter dehalogenans 2CP-1] gb|ABC83174.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] gb|ACG74703.1| conserved hypothetical protein [Anaeromyxobacter sp. K] gb|ACL66884.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 89 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/83 (51%), Positives = 61/83 (73%) Query: 26 ITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWVF 85 +T+L+GW ++ +LL T++ QV++QWR + GVS WLFAGQ ASAGF YSLL G+WVF Sbjct: 1 MTELLGWLSSAVLLATLARQVHKQWREGTGAGVSRWLFAGQTTASAGFTLYSLLVGNWVF 60 Query: 86 VVSNVFLLFTALLGQVLYLRNRR 108 VV+N +L +A+ G + +R RR Sbjct: 61 VVTNALILASAIAGVAITVRQRR 83 >ref|NP_642357.1| hypothetical protein XAC2031 [Xanthomonas axonopodis pv. citri str. 306] gb|AAM36893.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 91 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 43/85 (50%), Positives = 60/85 (70%) Query: 25 HITDLIGWGATLILLLTISSQVYEQWRSRSTQGVSHWLFAGQLAASAGFVTYSLLQGDWV 84 + D++GW A++IL+ T+ Q+Y+QWRS + QGVS WLF GQ++AS F+ YS L G+ V Sbjct: 2 QVVDVLGWLASIILIATLIRQIYKQWRSDAAQGVSRWLFLGQISASVLFILYSYLVGNAV 61 Query: 85 FVVSNVFLLFTALLGQVLYLRNRRR 109 F+VSNV +L TAL G L RR+ Sbjct: 62 FIVSNVLILLTALTGYALQRVKRRK 86