BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0007.p         (74 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004752624.1| intracellular protease, PfpI family [Collimo...    67   8e-10

>ref|YP_004752624.1| intracellular protease, PfpI family [Collimonas fungivorans Ter331]
 gb|AEK61801.1| intracellular protease, PfpI family [Collimonas fungivorans Ter331]
          Length = 309

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 1/74 (1%)

Query: 1   MSAS-KPDKDHRPNKYDTPSEVALDEANEMSFPGSDPVATSNITRIEKAPEMDRASNDHQ 59
           MSA+ K  K+ R  K+D+P E+ LD ANEMSFP SDPVA+SNITR+ +AP+M  A+ DHQ
Sbjct: 46  MSANDKQQKNVRSGKHDSPDEITLDNANEMSFPASDPVASSNITRVAEAPDMAAAAADHQ 105

Query: 60  NRNQVRENTRQNTP 73
           N N V        P
Sbjct: 106 NSNAVEGGVDSGKP 119