BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0044.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777256.1| LysR family transcription regulator protein ... 619 e-175 ref|YP_004378053.1| LysR family transcription regulator protein ... 290 2e-76 ref|YP_003773579.1| LysR family transcription regulator protein ... 285 6e-75 ref|YP_001863148.1| LysR family transcriptional regulator [Burkh... 284 2e-74 ref|YP_001888319.1| LysR family transcriptional regulator [Burkh... 276 4e-72 ref|YP_004476029.1| LysR family transcriptional regulator [Pseud... 275 8e-72 ref|ZP_02887338.1| transcriptional regulator, LysR family [Burkh... 273 3e-71 ref|YP_004230567.1| LysR family transcriptional regulator [Burkh... 272 4e-71 ref|YP_003774793.1| LysR family transcription regulator protein ... 271 1e-70 ref|YP_003910523.1| LysR family transcriptional regulator [Burkh... 267 2e-69 >ref|YP_003777256.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65348.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 324 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 302/302 (100%), Positives = 302/302 (100%) Query: 1 VGSIVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPR 60 VGSIVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPR Sbjct: 23 VGSIVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPR 82 Query: 61 GIEATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAPFVTRALSRLR 120 GIEATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAPFVTRALSRLR Sbjct: 83 GIEATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAPFVTRALSRLR 142 Query: 121 EIQPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGID 180 EIQPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGID Sbjct: 143 EIQPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGID 202 Query: 181 HPLATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLL 240 HPLATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLL Sbjct: 203 HPLATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLL 262 Query: 241 AQSNMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQ 300 AQSNMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQ Sbjct: 263 AQSNMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQ 322 Query: 301 QN 302 QN Sbjct: 323 QN 324 >ref|YP_004378053.1| LysR family transcription regulator protein [Pseudomonas mendocina NK-01] gb|AEB56301.1| LysR family transcription regulator protein [Pseudomonas mendocina NK-01] Length = 310 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 153/299 (51%), Positives = 218/299 (72%), Gaps = 1/299 (0%) Query: 1 VGSIVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPR 60 V SI SRLRFRQ+ LL AL EQGSL KAAE++ ++QP ATKAL E+E LG LF R+ R Sbjct: 5 VSSIFSRLRFRQLRLLIALGEQGSLIKAAELVSISQPGATKALQEIETTLGAPLFVRTNR 64 Query: 61 GIEATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAPFVTRALSRLR 120 G+EA ELG C IRYA+LIQ+D+ +LR+E+ ++ G GGRL++G IMGA PF+T AL+RL Sbjct: 65 GLEANELGHCAIRYAKLIQTDLTHLREEMLGILQGHGGRLSVGVIMGAVPFMTDALTRLL 124 Query: 121 EIQPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGID 180 E P++S+EI EDTSAR L LLDQGR+DL I R+S+S QP Y +R E + +V+ D Sbjct: 125 EEHPDLSVEIVEDTSARLLSLLDQGRLDLAICRTSISRQPEQYDCIDVRDETLAVVANRD 184 Query: 181 HPLATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLL 240 HPLA ++ L +LA++ W++YS+NMPMR+ +E EF+ G++ P +++ET S F T++LL Sbjct: 185 HPLAGRAQLELADLADSRWVVYSANMPMRLSLEREFQQAGLRFPLHLLETTSAFTTLSLL 244 Query: 241 AQS-NMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQIL 298 ++ +VA++ D+A F M ILP+ LK+R E Y ++TR+ +LSS++++FI+ L Sbjct: 245 QKNPELVALLSTDVARFCTGFGMTCILPLQLKSRSEPYQLITRRGVSLSSISRLFIEQL 303 >ref|YP_003773579.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ61671.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 314 Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 150/296 (50%), Positives = 212/296 (71%), Gaps = 1/296 (0%) Query: 1 VGSIVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPR 60 + SI SRL RQ+ LL AL + GSL KAAE + +TQP A+KAL E+E LGV LF R+ R Sbjct: 8 LASITSRLHLRQLRLLIALSDHGSLLKAAEQVALTQPGASKALQEIESTLGVQLFTRTNR 67 Query: 61 GIEATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAPFVTRALSRLR 120 G+E TELG CVIRYARLIQ+D+ +LR+E+ ++ G GGRLA+GTIMGA P +T AL+RL Sbjct: 68 GLEPTELGHCVIRYARLIQTDLTHLREEMLAIMQGHGGRLAVGTIMGAVPLLTDALTRLL 127 Query: 121 EIQPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGID 180 E P +S+EI EDTSAR L LLDQGR+DL I R+S+S +P+LY + E + +V+ + Sbjct: 128 EAHPALSVEIVEDTSARLLRLLDQGRLDLAICRTSISQRPDLYDAFNIHEEELAVVASVQ 187 Query: 181 HPLATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLL 240 HPLA A ++L +LA++ W++YS+NMPMR+ +E EF ++ P +++ET S F T++LL Sbjct: 188 HPLADAPSLQLADLADSRWVVYSANMPMRLTLEREFHDADLRFPLHLMETTSAFTTLSLL 247 Query: 241 AQS-NMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFI 295 ++ + VA++ +D+A F M ILP+ L TR E Y +VTR+ T LS +A++F+ Sbjct: 248 QKNPHFVALLSVDVAQFCTRFGMTRILPLRLHTRSEPYQLVTRRGTMLSPVARLFL 303 >ref|YP_001863148.1| LysR family transcriptional regulator [Burkholderia phymatum STM815] gb|ACC76102.1| transcriptional regulator, LysR family [Burkholderia phymatum STM815] Length = 305 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 156/300 (52%), Positives = 210/300 (70%), Gaps = 2/300 (0%) Query: 1 VGSIVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPR 60 V SIV+RLR +Q+ LL ALDE GSLH+AA+ M +TQP ATKAL E+E G TLF RSP+ Sbjct: 5 VDSIVARLRLKQLRLLIALDEHGSLHRAADQMALTQPGATKALREIEATFGATLFTRSPQ 64 Query: 61 GIEATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAPFV-TRALSRL 119 GI+ ELGRCV+RYARLI DVA+LR+E++ ++ G GGRLA+G I GA V AL+RL Sbjct: 65 GIQPNELGRCVVRYARLIHMDVAHLREEMEGILQGSGGRLAVGAITGAVSGVLVDALTRL 124 Query: 120 REIQPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGI 179 RE QP +++E+ EDTSAR L LLDQGR+DL I R++V+ QP+ Y Y LR EP+ IV+ Sbjct: 125 RERQPTLTVEVVEDTSARLLALLDQGRLDLAICRTTVAQQPDHYDYVELRDEPLAIVASP 184 Query: 180 DHPLATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITL 239 H LA A+KV+L +LA + WI+Y S MP+R E EFK G+ VP + IETAS T+ + Sbjct: 185 LHRLAKARKVKLADLASSRWIVYPSIMPLRGLFEREFKEAGLSVPPHPIETASTMTTVLM 244 Query: 240 LAQS-NMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQIL 298 L + +V++MP D+A A + L +++++R E YGIVTR+ LS+ A++ I L Sbjct: 245 LQRDPTLVSLMPRDMAALLADHGLARPLAIDVRSRTEPYGIVTRRGCALSAAAQLMIDEL 304 >ref|YP_001888319.1| LysR family transcriptional regulator [Burkholderia phytofirmans PsJN] gb|ACD18949.1| transcriptional regulator, LysR family [Burkholderia phytofirmans PsJN] Length = 327 Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 143/300 (47%), Positives = 204/300 (68%), Gaps = 2/300 (0%) Query: 4 IVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPRGIE 63 ++S+LR +Q+ LL ALD+ SLHKAA M MTQ AA+KAL E+E L LF+RS G+ Sbjct: 8 LLSKLRMKQLQLLIALDDLKSLHKAAGAMSMTQSAASKALQELESMLEAPLFERSKSGMI 67 Query: 64 ATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAP-FVTRALSRLREI 122 +LG CVIRYARL+ +D+ L ++ + SGRGGRLAIG IMGA P V AL++L Sbjct: 68 PNQLGHCVIRYARLMTTDLTALCQDVAEIRSGRGGRLAIGAIMGAIPECVVPALNQLHAA 127 Query: 123 QPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGIDHP 182 QP +S+E+ EDTSAR L LD GR+DL+IGR++V++ P+ YHY L EP+ +V G HP Sbjct: 128 QPGLSVEVVEDTSARMLRQLDDGRLDLVIGRATVAADPSKYHYRPLGDEPLSVVVGYGHP 187 Query: 183 LATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLLAQ 242 ++V+L++LA W++Y S+MP+ +E E L G+++P N + TAS FVT+ LL Sbjct: 188 PLPKKEVKLRDLAGHRWVMYPSHMPLHALLEREMDLAGLQMPDNPVSTASTFVTVALLQS 247 Query: 243 S-NMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQQ 301 S ++V+++P IA F ++ML ++PV LK+ + +GIVTRK LS A+ FI++L Q Sbjct: 248 SHDLVSLLPTAIAALFVRQKMLRLVPVKLKSPSQTFGIVTRKGGVLSPPAEQFIELLCAQ 307 >ref|YP_004476029.1| LysR family transcriptional regulator [Pseudomonas fulva 12-X] gb|AEF23935.1| transcriptional regulator, LysR family [Pseudomonas fulva 12-X] Length = 318 Score = 275 bits (702), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 140/285 (49%), Positives = 197/285 (69%), Gaps = 1/285 (0%) Query: 18 ALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPRGIEATELGRCVIRYARL 77 ALDEQGSLHKAA+V+ ++QP ATKAL+E+E A G LF R+ +G+EA +LGRC IRYARL Sbjct: 26 ALDEQGSLHKAADVVAISQPGATKALNEIESAFGTRLFTRTSQGLEANDLGRCAIRYARL 85 Query: 78 IQSDVANLRDELQNMISGRGGRLAIGTIMGAAPFVTRALSRLREIQPEVSIEISEDTSAR 137 I SD+A+LR+E+ ++ G+GGRL +G IMGA P +TRALSRLR QPE+S+EI EDTSAR Sbjct: 86 IHSDLAHLREEMLGILQGQGGRLVVGVIMGAVPHLTRALSRLRARQPELSVEIVEDTSAR 145 Query: 138 QLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGIDHPLATAQKVRLQELAEA 197 L L+DQGR+DL I R+SVS +P+ Y L E + +V+ HPLA + L++LA Sbjct: 146 LLSLIDQGRVDLAICRTSVSRRPDDYDCLSLHDEQLKVVANPAHPLANTPGLSLEQLAAY 205 Query: 198 SWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLLAQS-NMVAVMPLDIAHF 256 SW+++ +NMPMR+ +E F ++ P +ETAS F T+ LL + N+VA+MP + A Sbjct: 206 SWVVFPANMPMRLVLERAFSDAELEFPRYPLETASTFATLMLLQEDPNLVALMPRETAQS 265 Query: 257 FAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQQ 301 A L L R E YG+++R+ + LS+ A++ ++ LR + Sbjct: 266 AARAGQLACLDTAQVLRSEPYGVISRRGSPLSAPARLLLEELRDE 310 >ref|ZP_02887338.1| transcriptional regulator, LysR family [Burkholderia graminis C4D1M] gb|EDT07044.1| transcriptional regulator, LysR family [Burkholderia graminis C4D1M] Length = 332 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 140/300 (46%), Positives = 202/300 (67%), Gaps = 2/300 (0%) Query: 4 IVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPRGIE 63 ++ +LR +Q+ LL ALD Q SLHKAA +M MTQ AA+KAL E+E LF+RS G+ Sbjct: 8 LLGKLRMKQLQLLIALDHQKSLHKAAGLMSMTQSAASKALQELESMFEAPLFERSKSGMI 67 Query: 64 ATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAP-FVTRALSRLREI 122 +LG CVIR+ARL+ +D+ L ++ + SGRGGRLAIG IMGA P V A++RL Sbjct: 68 PNQLGHCVIRHARLVATDLTALCQDVAEIRSGRGGRLAIGAIMGAIPQCVIPAVNRLHAG 127 Query: 123 QPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGIDHP 182 P +SIE+ EDTSAR L LD GR+DLMIGR++V++ P+ Y Y L EP+ +V G HP Sbjct: 128 HPNLSIEVVEDTSARMLAQLDDGRLDLMIGRAAVAADPSKYQYRPLADEPLSVVVGYGHP 187 Query: 183 LATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLL-A 241 ++V+L +LA+ W++Y S+MP+ +E E L G+ +P N I TAS FVT+ LL + Sbjct: 188 PLPRKEVKLGDLADHRWVMYPSHMPLHALLEREMDLAGLTMPDNPISTASTFVTVALLQS 247 Query: 242 QSNMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQQ 301 ++++V+++P IA F ++ML +PV LK+ + +G+VTRK LS A+ F+++LRQ Sbjct: 248 RADLVSLLPTAIAEMFIRQKMLRAVPVKLKSPSQTFGVVTRKGGVLSPPAERFVELLRQH 307 >ref|YP_004230567.1| LysR family transcriptional regulator [Burkholderia sp. CCGE1001] gb|ADX57507.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1001] Length = 337 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 142/300 (47%), Positives = 200/300 (66%), Gaps = 2/300 (0%) Query: 4 IVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPRGIE 63 ++ +LR +Q+ LL ALD+Q SLHKAA +M MTQ AA+KALHE+E LF+RS G+ Sbjct: 8 LLGKLRMKQLQLLIALDDQKSLHKAAGLMAMTQSAASKALHELESMFEAPLFERSKSGMI 67 Query: 64 ATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGA-APFVTRALSRLREI 122 +LG CVIRYARL+ +D+ L ++ + SGRGGRLAIG IMGA A V A++RL Sbjct: 68 PNQLGHCVIRYARLVATDLTALCQDVAEIRSGRGGRLAIGAIMGAIAQCVIPAVNRLHAG 127 Query: 123 QPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGIDHP 182 P +SIE+ EDTSAR L LD GR+DL+IGR++V++ P+ Y Y L EP+ +V G HP Sbjct: 128 YPNLSIEVVEDTSARMLAQLDDGRLDLVIGRAAVAADPSKYQYHPLADEPLSVVVGYGHP 187 Query: 183 LATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLLAQ 242 ++V L +LA+ W++Y S+MP+ +E E L G+ +P N I TAS FVT+ LL Sbjct: 188 PLPKKEVNLADLADHRWVMYPSHMPLHALLEREMDLAGLSMPDNPISTASTFVTVALLQS 247 Query: 243 S-NMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQQ 301 S ++V+++P IA F ++ML +PV LK+ + +G+VTRK LS A F+++LRQ Sbjct: 248 SADLVSLLPTAIADMFIRQKMLRRVPVRLKSPSQTFGVVTRKGGVLSPPAGRFVELLRQH 307 >ref|YP_003774793.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62885.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 321 Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 138/302 (45%), Positives = 198/302 (65%), Gaps = 2/302 (0%) Query: 1 VGSIVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPR 60 + S++SRLR +Q+ LL ALDE SLHKA+ + MTQ AA+K+L E+E L LF+R+ Sbjct: 17 LNSLLSRLRMKQLQLLIALDEHKSLHKASSALAMTQSAASKSLAELESMLDAQLFERTKS 76 Query: 61 GIEATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGAAP-FVTRALSRL 119 G+ A G CVIRYARL+ +D+ +L +E+ + SG+GGRLAIG +MGA P + A+ L Sbjct: 77 GLIANPFGHCVIRYARLMATDLGSLCEEMAQIRSGQGGRLAIGAVMGAVPALIVPAVDAL 136 Query: 120 REIQPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGI 179 + P +SIEI EDTS L LLD+G +DL++ R+SVS+ P YHY+ L EP+ +V Sbjct: 137 QRRHPALSIEIVEDTSLHMLDLLDEGHLDLLVARASVSAHPGKYHYQSLSEEPLSVVVSA 196 Query: 180 DHPLATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITL 239 +HP ++++L LA WI Y S+MP+ +E E L G+ +P N I TAS FVT+ L Sbjct: 197 EHPRPRGKELQLAALAGYRWITYPSHMPLHAVLEREMDLAGLSMPANTIATASTFVTVAL 256 Query: 240 LAQ-SNMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQIL 298 L Q ++MV+++P +A F + ML ILPV L++ + GIVTRK LS + F+Q+L Sbjct: 257 LQQGADMVSILPTAVAEMFVQRGMLRILPVKLRSMSQTIGIVTRKGGQLSGAGQAFVQLL 316 Query: 299 RQ 300 R+ Sbjct: 317 RE 318 >ref|YP_003910523.1| LysR family transcriptional regulator [Burkholderia sp. CCGE1003] gb|ADN61232.1| transcriptional regulator, LysR family [Burkholderia sp. CCGE1003] Length = 337 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 139/300 (46%), Positives = 200/300 (66%), Gaps = 2/300 (0%) Query: 4 IVSRLRFRQVALLTALDEQGSLHKAAEVMHMTQPAATKALHEMEDALGVTLFDRSPRGIE 63 ++ +LR +Q+ LL ALD+Q SLHKAA +M MTQ AA+KAL E+E LF+RS G+ Sbjct: 8 LLGKLRMKQLQLLIALDDQKSLHKAAGLMSMTQSAASKALQELESMFEAPLFERSKSGMI 67 Query: 64 ATELGRCVIRYARLIQSDVANLRDELQNMISGRGGRLAIGTIMGA-APFVTRALSRLREI 122 +LG CVIR+ARL+ +D+ L ++ + SGRGGRLAIG IMGA A V A++RL Sbjct: 68 PNQLGHCVIRHARLVATDLTALCQDVAEIRSGRGGRLAIGAIMGAIAQCVIPAVNRLHAG 127 Query: 123 QPEVSIEISEDTSARQLLLLDQGRIDLMIGRSSVSSQPNLYHYEMLRGEPMCIVSGIDHP 182 P++SIE+ EDTSAR L LD GR+DL+IGR++V++ P+ Y Y L EP+ +V G HP Sbjct: 128 YPKLSIEVVEDTSARMLAQLDDGRLDLVIGRAAVAADPSKYQYRPLADEPLSVVVGYAHP 187 Query: 183 LATAQKVRLQELAEASWILYSSNMPMRIWIEHEFKLEGVKVPGNVIETASPFVTITLLAQ 242 +++ L +LA+ W++Y S+MP+ +E E L G+ +P N I TAS FVT+ LL Sbjct: 188 PWPKKELTLADLADHRWVMYPSHMPLHALLEREMDLAGLAMPDNRISTASTFVTVALLQS 247 Query: 243 S-NMVAVMPLDIAHFFAAKQMLGILPVNLKTRIEHYGIVTRKNTTLSSLAKMFIQILRQQ 301 S + V+++P IA F ++ML +PV LK+ + +G+VTRK LS A+ F+++LRQ Sbjct: 248 SADFVSLLPTAIAEMFIRQKMLRAVPVKLKSPSQTFGVVTRKGGVLSPPAERFVELLRQH 307