BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0039.p (207 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777252.1| threonine efflux protein [Herbaspirillum ser... 387 e-106 ref|YP_001631794.1| amino acid transporter LysE [Bordetella petr... 152 4e-35 ref|YP_002006687.1| neutral amino-acid efflux system [Cupriavidu... 144 9e-33 ref|YP_260128.1| LysE family translocator protein [Pseudomonas f... 134 1e-29 ref|YP_003505177.1| lysine exporter protein LysE/YggA [Denitrovi... 133 2e-29 ref|YP_001669030.1| lysine exporter protein LysE/YggA [Pseudomon... 132 2e-29 dbj|BAK72629.1| lysine transport protein [Arcobacter sp. L] 131 5e-29 ref|YP_002028052.1| lysine exporter protein LysE/YggA [Stenotrop... 130 1e-28 ref|ZP_04761095.1| Lysine exporter protein (LYSE/YGGA) [Acidovor... 129 2e-28 ref|YP_001749585.1| lysine exporter protein LysE/YggA [Pseudomon... 128 6e-28 >ref|YP_003777252.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] gb|ADJ65344.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] Length = 207 Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust. Identities = 204/207 (98%), Positives = 204/207 (98%) Query: 1 MFSSEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAG 60 MFSSEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAG Sbjct: 1 MFSSEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAG 60 Query: 61 FSLLQHSPALLVAMQWLASLYLAWLGWMFMRASLEPAPWPGSAGRQAATAWRGVGAGFLS 120 FSLLQHSPALLVAMQWLASLYLAWLGWMFMRASLEPAPWPGSAGRQAA AWRGVGAGFLS Sbjct: 61 FSLLQHSPALLVAMQWLASLYLAWLGWMFMRASLEPAPWPGSAGRQAAAAWRGVGAGFLS 120 Query: 121 ALLNPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVVALLG 180 ALLNPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRV ALL Sbjct: 121 ALLNPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVAALLD 180 Query: 181 RALPMVERVAGLLLMVAAAALAVTRSA 207 RALPMVERVAGLLLMVAAAALAVTRSA Sbjct: 181 RALPMVERVAGLLLMVAAAALAVTRSA 207 >ref|YP_001631794.1| amino acid transporter LysE [Bordetella petrii DSM 12804] emb|CAP43526.1| probable transporter, LysE family [Bordetella petrii] Length = 225 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 101/204 (49%), Positives = 126/204 (61%), Gaps = 12/204 (5%) Query: 4 SEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSL 63 +F+L+A AH LAL SPGPDF L+VRGAL HG A GIAAANG++IALAI GFS Sbjct: 6 QQFILVAGAHFLALLSPGPDFFLVVRGALLHGWRKAAALCLGIAAANGVFIALAIGGFSA 65 Query: 64 LQ-HSPALLVAMQWLASLYLAWLGWMFMR------ASLEPAPWPGSAGRQAATAW-RGVG 115 L+ HSP L A+Q +YLA+LG + +R +L A PG+A AA AW R Sbjct: 66 LRPHSP-LFYALQAGGCVYLAYLGVLLIRHARPADTALRAASRPGTA---AAPAWHRRFA 121 Query: 116 AGFLSALLNPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRV 175 GF S +LNPKN LFY LF+L+ HTG+ +L YG+WMFG VL WD + + P Sbjct: 122 TGFASGILNPKNALFYASLFSLLAGEHTGIGAQLAYGLWMFGVVLGWDLLVAAGVGHPAA 181 Query: 176 VALLGRALPMVERVAGLLLMVAAA 199 VA R VERV G +L++ AA Sbjct: 182 VAWFARYNAAVERVTGAVLLLIAA 205 >ref|YP_002006687.1| neutral amino-acid efflux system [Cupriavidus taiwanensis LMG 19424] emb|CAQ70626.1| neutral amino-acid efflux system [Cupriavidus taiwanensis LMG 19424] Length = 220 Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 89/201 (44%), Positives = 120/201 (59%), Gaps = 2/201 (0%) Query: 4 SEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSL 63 +F ++A AH LAL SPGPDF L+VR AL HG A GIA NG++I LA+AGF+ Sbjct: 15 QQFAMVAGAHALALLSPGPDFFLVVRSALLHGPRRASAVCLGIALGNGVFIGLALAGFAA 74 Query: 64 LQHSPALLVAMQWLASLYLAWLGWMFMRAS--LEPAPWPGSAGRQAATAWRGVGAGFLSA 121 ++ SP L A+QW YLAWLGW + AS L +A A + +GFLSA Sbjct: 75 MRDSPQLFAALQWAGCAYLAWLGWRLLNASGELSMPAADAAARPAPAAWLAQMASGFLSA 134 Query: 122 LLNPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVVALLGR 181 +LNPKNGLFY LF+++ + T +L YGVWMF VL WD + + P + A GR Sbjct: 135 VLNPKNGLFYASLFSVLAASRTPAAVQLAYGVWMFAVVLGWDLLVAYGIGHPAMAARFGR 194 Query: 182 ALPMVERVAGLLLMVAAAALA 202 ++ VER+ G++L + A +A Sbjct: 195 SVRWVERLTGVVLWLLAMGVA 215 >ref|YP_260128.1| LysE family translocator protein [Pseudomonas fluorescens Pf-5] gb|AAY92292.1| translocator protein, LysE family [Pseudomonas fluorescens Pf-5] Length = 212 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/195 (45%), Positives = 113/195 (57%), Gaps = 10/195 (5%) Query: 4 SEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSL 63 +FLL+A+AH LAL SPGPDF L+ R ++ G A GIA ANG +I LA AG S+ Sbjct: 3 QQFLLVAAAHFLALLSPGPDFFLVARMSMAAGWRSATGACLGIALANGAFIVLAFAGVSV 62 Query: 64 LQHSPALLVAMQWLASLYLAWLGWMFMR-------ASLEPAPWPGSAGRQAATAWRGVGA 116 + L +A+Q YL ++GW+F+R A+++ GR AT WRG+G Sbjct: 63 FRAGSPLFLAIQLAGCGYLLYMGWLFIRHAGASSLAAVDGNDEARPLGR--ATWWRGLGM 120 Query: 117 GFLSALLNPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVV 176 GFLS +LNPKN LFY L +L V A T KL YG+WMF AVL WD + + RV Sbjct: 121 GFLSGILNPKNALFYVSLASL-VGAQTSAGWKLVYGLWMFSAVLLWDVLVALAIGNRRVR 179 Query: 177 ALLGRALPMVERVAG 191 L RALP +ER G Sbjct: 180 ERLARALPWLERGTG 194 >ref|YP_003505177.1| lysine exporter protein LysE/YggA [Denitrovibrio acetiphilus DSM 12809] gb|ADD69221.1| Lysine exporter protein (LYSE/YGGA) [Denitrovibrio acetiphilus DSM 12809] Length = 202 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 111/199 (55%) Query: 4 SEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSL 63 +EFL +A AH LAL SPGPDF +++ ALR+G G GIA+ANG+YI LA+ GFS Sbjct: 2 TEFLTVAVAHFLALISPGPDFFIIITKALRNGSGRAFYTCFGIASANGVYIILALIGFSA 61 Query: 64 LQHSPALLVAMQWLASLYLAWLGWMFMRASLEPAPWPGSAGRQAATAWRGVGAGFLSALL 123 ++ +L M+ + +L +LG+M +R+ + + GF+SA+L Sbjct: 62 VREHVWVLSVMKVAGAGFLCYLGFMLLRSGKRDLYSSERVVHRHESVRMLFMTGFVSAIL 121 Query: 124 NPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVVALLGRAL 183 NPKN +FY L++L + TGL + YG+WMF AVL WD + + R+ LL Sbjct: 122 NPKNPIFYISLYSLFISRTTGLHIQALYGLWMFSAVLLWDVFIAFSVGNSRIRKLLNNYA 181 Query: 184 PMVERVAGLLLMVAAAALA 202 +E+ +G +++ LA Sbjct: 182 HRIEQFSGAVIITLGLVLA 200 >ref|YP_001669030.1| lysine exporter protein LysE/YggA [Pseudomonas putida GB-1] gb|ABY98694.1| Lysine exporter protein (LYSE/YGGA) [Pseudomonas putida GB-1] Length = 204 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 2/190 (1%) Query: 4 SEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSL 63 +FL++A AH LAL SPGPDF L+ R ++ G A GIA ANG +IA+A G S+ Sbjct: 2 QQFLIIALAHFLALLSPGPDFFLVARSSINSGWCTASGACLGIALANGAFIAMAFTGLSV 61 Query: 64 LQHSPALLVAMQWLASLYLAWLGWMFMRASLEPAPWPGSAGRQAATAWRGVGAGFLSALL 123 LQ L +Q + YL ++G +F+R + + + + ++A WR VG GFLS +L Sbjct: 62 LQEGSLLFTTLQLAGASYLLYIGVLFLRHAGQTSLGTVAGSQRAQGWWRNVGMGFLSGVL 121 Query: 124 NPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVVALLGRAL 183 NPKN LFY L +++ A G K Y VWMF VL WD + + RV+ R+L Sbjct: 122 NPKNALFYASLASMVASASVGW--KTAYAVWMFSIVLLWDLAVAVAIGNQRVLRRFARSL 179 Query: 184 PMVERVAGLL 193 P +ER +G++ Sbjct: 180 PWLERASGVM 189 >dbj|BAK72629.1| lysine transport protein [Arcobacter sp. L] Length = 209 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 107/195 (54%) Query: 4 SEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSL 63 F +LA AH LAL SPG DF +++ +++G+ G+ + GIA AN +YI LA+ G Sbjct: 8 QSFFILAFAHFLALISPGVDFFIIINSTIKNGKRTGIIVAFGIAIANLVYILLALFGIMF 67 Query: 64 LQHSPALLVAMQWLASLYLAWLGWMFMRASLEPAPWPGSAGRQAATAWRGVGAGFLSALL 123 L+ + + ++ +YL ++ + ++ + S ++ GFLSA+L Sbjct: 68 LKDNLFIFNFLKLSGCVYLFYISYYLFKSKRKNLFENVSKNKKVDNHLSSFFKGFLSAIL 127 Query: 124 NPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVVALLGRAL 183 NPKN +FYF +F++ + +T + YG+WMF AVL WD +V ++ ++ L R + Sbjct: 128 NPKNFIFYFSMFSITFQNNTPFFIQTIYGLWMFFAVLIWDIFIVYILNLKKIKQLFNRYI 187 Query: 184 PMVERVAGLLLMVAA 198 ++E+++ + L A Sbjct: 188 YLIEKISAVFLTFVA 202 >ref|YP_002028052.1| lysine exporter protein LysE/YggA [Stenotrophomonas maltophilia R551-3] gb|ACF51369.1| Lysine exporter protein (LYSE/YGGA) [Stenotrophomonas maltophilia R551-3] Length = 209 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 112/204 (54%), Gaps = 3/204 (1%) Query: 4 SEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSL 63 +FL++A+ H LAL SPGPDF L+ R A+ G A AGIA NG++I A G ++ Sbjct: 2 EQFLVIATVHFLALLSPGPDFFLVARTAITSGWRTASGACAGIALGNGIFIVAAFTGIAM 61 Query: 64 LQHSPALLVAMQWLASLYLAWLGWMFMR-ASLEPAPWPGSAGRQAATA--WRGVGAGFLS 120 L+ A +A+Q +L +LG +F+R A P + R T W+ G G LS Sbjct: 62 LRAGSAGFIAVQLAGCGFLLYLGTLFLRHAGSTTLQAPATESRAGDTHGWWKAAGLGALS 121 Query: 121 ALLNPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVVALLG 180 ALLNPKN LFY L ++ K FYG WMFG VL WD + L+ P V+ Sbjct: 122 ALLNPKNALFYATLAAMLNGPQANATTKFFYGAWMFGIVLLWDLLVAALVGHPWVLRRFA 181 Query: 181 RALPMVERVAGLLLMVAAAALAVT 204 RALP +ER AGLL++ A + V+ Sbjct: 182 RALPWLERAAGLLMIALALWIVVS 205 >ref|ZP_04761095.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax delafieldii 2AN] gb|EER62049.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax delafieldii 2AN] Length = 209 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 111/199 (55%), Gaps = 8/199 (4%) Query: 8 LLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSLLQHS 67 ++A+AH LAL SPGPDF L+ R +L G GIA ANG++I A AG + +Q Sbjct: 1 MIAAAHFLALLSPGPDFFLVARTSLSTGWRVASGTCLGIALANGVFIVAAFAGTTTMQTE 60 Query: 68 PALLVAMQWLASLYLAWLGWMFMR----ASLEPAPWPGSA-GRQAATA---WRGVGAGFL 119 VA+Q YL +LG +F+R +LE P G RQA+ WR G GFL Sbjct: 61 SGTFVALQLAGCAYLLYLGTVFVRHAGTNALEITPDQGYGLPRQASPVTAWWRAAGMGFL 120 Query: 120 SALLNPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVVALL 179 S +LNPKN LFY L ++ H + K+ YG WMF AVL WD + ++ V+ Sbjct: 121 SGILNPKNALFYASLAAMLTGPHASMGWKVIYGTWMFSAVLLWDFFVAVMIGNQTVLDRF 180 Query: 180 GRALPMVERVAGLLLMVAA 198 + LP +ER++G++L++ A Sbjct: 181 AKTLPWLERISGVVLVLFA 199 >ref|YP_001749585.1| lysine exporter protein LysE/YggA [Pseudomonas putida W619] gb|ACA73216.1| Lysine exporter protein (LYSE/YGGA) [Pseudomonas putida W619] Length = 204 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 116/198 (58%), Gaps = 2/198 (1%) Query: 4 SEFLLLASAHLLALASPGPDFLLLVRGALRHGRGYGLAASAGIAAANGLYIALAIAGFSL 63 +FL++A AH LAL SPGPDF L+ R ++ G GIA ANGL+I+LA AG ++ Sbjct: 2 EQFLIVALAHFLALLSPGPDFFLVARTSISAGWRVASGTCLGIALANGLFISLAFAGLAV 61 Query: 64 LQHSPALLVAMQWLASLYLAWLGWMFMRASLEPAPWPGSAGRQAATAWRGVGAGFLSALL 123 LQ + +A+Q ++YL ++G +F+R + + R + WRG+G GF+S L Sbjct: 62 LQEGSPVFIALQLAGAVYLLYIGALFLRHAGQSGLAAVGTLRAVSGWWRGLGMGFVSGAL 121 Query: 124 NPKNGLFYFGLFTLMVEAHTGLPRKLFYGVWMFGAVLAWDAGLVCLMAQPRVVALLGRAL 183 NPKN LFY L +++ A++G K YG WMF VL WD + + R++ AL Sbjct: 122 NPKNALFYASLASMV--ANSGAAWKWAYGAWMFTIVLLWDLLVASAIGNKRLLRRFSHAL 179 Query: 184 PMVERVAGLLLMVAAAAL 201 P +ER +G++L+ A AL Sbjct: 180 PWLERASGMMLIALAGAL 197