BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0036.p (566 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777249.1| long-chain-fatty-acid-CoA ligase [Herbaspiri... 1170 0.0 ref|YP_004754638.1| long-chain-fatty-acid--CoA ligase [Collimona... 919 0.0 ref|YP_001351965.1| long-chain fatty-acid-CoA ligase [Janthinoba... 839 0.0 ref|YP_297198.1| acyl-CoA synthetase [Ralstonia eutropha JMP134]... 837 0.0 ref|YP_585289.1| Long-chain-fatty-acid--CoA ligase [Cupriavidus ... 837 0.0 ref|YP_727730.1| acyl-CoA synthetase [Ralstonia eutropha H16] >g... 833 0.0 ref|YP_002006735.1| long-chain-fatty-acid--CoA ligase [Cupriavid... 830 0.0 ref|YP_004687017.1| long-chain-fatty-acid--CoA ligase FadD [Cupr... 830 0.0 ref|ZP_02382310.1| acyl-CoA synthetase [Burkholderia ubonensis Bu] 822 0.0 ref|YP_001098579.1| long-chain-fatty-acid--CoA ligase [Herminiim... 815 0.0 >ref|YP_003777249.1| long-chain-fatty-acid-CoA ligase [Herbaspirillum seropedicae SmR1] gb|ADJ65341.1| long-chain-fatty-acid-CoA ligase protein [Herbaspirillum seropedicae SmR1] Length = 566 Score = 1170 bits (3026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 566/566 (100%), Positives = 566/566 (100%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA Sbjct: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG Sbjct: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP Sbjct: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW Sbjct: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK Sbjct: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY Sbjct: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG Sbjct: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ Sbjct: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL Sbjct: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 Query: 541 PKTNVGKILRRELRDEPAKAQQKQAA 566 PKTNVGKILRRELRDEPAKAQQKQAA Sbjct: 541 PKTNVGKILRRELRDEPAKAQQKQAA 566 >ref|YP_004754638.1| long-chain-fatty-acid--CoA ligase [Collimonas fungivorans Ter331] gb|AAT42425.1| acyl-CoA synthetase [Collimonas fungivorans Ter331] gb|AEK63815.1| Long-chain-fatty-acid--CoA ligase [Collimonas fungivorans Ter331] Length = 568 Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/566 (77%), Positives = 492/566 (86%), Gaps = 2/566 (0%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 +++FWL SYP GV EID +Y SL Q+++EAF ++A R AY CMGKYL+Y E+D LSR Sbjct: 5 VDKFWLKSYPEGVAPEIDYSQYQSLAQLLEEAFQKYAPRNAYACMGKYLTYAEVDQLSRK 64 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 +G WLQG GL+KGARVAIMMPNVLQYP+AIAAILRAGY VVNVNPLYT RELEHQL DSG Sbjct: 65 VGAWLQGKGLEKGARVAIMMPNVLQYPVAIAAILRAGYIVVNVNPLYTPRELEHQLNDSG 124 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAIF+LENFA TLQ+V+A T +KH+VVASMG+L+G +KG +VNLVVRHVKK+VP++SLP Sbjct: 125 AEAIFILENFATTLQQVIARTKVKHVVVASMGDLMG-VKGLVVNLVVRHVKKMVPSFSLP 183 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 ++ F+ LSQ L+PV LT DD AFLQYTGGTTGV+KGA L+HRN+VANVLQAE W Sbjct: 184 GSVPFNSVLSQGASLQLKPVALTPDDTAFLQYTGGTTGVSKGATLSHRNVVANVLQAEAW 243 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 L P L G ++QLVFVCALPLYHIFALTVC MLG REGALNLL+PNPRDI G +KE++K Sbjct: 244 LAPGLNNGPKVEQLVFVCALPLYHIFALTVCGMLGMREGALNLLVPNPRDIAGLIKEMSK 303 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 Y++NTFPAVNTLYNALLN+ DFA+LDFSGYR CVGGGMAVQK+VADKWK++TGCPIIEGY Sbjct: 304 YQINTFPAVNTLYNALLNHPDFAKLDFSGYRVCVGGGMAVQKAVADKWKEVTGCPIIEGY 363 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSPIA ANPC I EY+GTIGLPLPSTE AILDD G PV LGQ GEIAIRGPQVM G Sbjct: 364 GLSETSPIACANPCDIKEYSGTIGLPLPSTEIAILDDAGNPVALGQAGEIAIRGPQVMRG 423 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW R DETAKVMT DGFFK+GDIG+MDERGYTKIVDRKKDMILVSGFNVYPNEVEGVV Q Sbjct: 424 YWNRDDETAKVMTADGFFKSGDIGIMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVVQ 483 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 HPGVLECACVGVPDEH GE VK+FVVRKD +L+A QLM YC+EQ TGYK+PKYIEFR +L Sbjct: 484 HPGVLECACVGVPDEHAGEVVKIFVVRKDPSLTAEQLMAYCREQLTGYKRPKYIEFRTDL 543 Query: 541 PKTNVGKILRRELRDEPAKAQQKQAA 566 PKTNVGKILRRELRDE A+QKQAA Sbjct: 544 PKTNVGKILRRELRDE-KPAEQKQAA 568 >ref|YP_001351965.1| long-chain fatty-acid-CoA ligase [Janthinobacterium sp. Marseille] gb|ABR88609.1| long-chain fatty-acid-CoA ligase [Janthinobacterium sp. Marseille] Length = 560 Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/560 (72%), Positives = 465/560 (83%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 M++FWL SYP G+PAEIDP RYGSLV+++DE+F ++ADR A VCM K L+YRE+D LS Sbjct: 1 MDKFWLKSYPEGIPAEIDPARYGSLVELLDESFQKYADRNACVCMDKALTYREVDHLSTE 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 +G WLQ +GLQKGARVA+MMPNVLQYPIAIAA+LRAGY +VNVNPLY RELEHQL DSG Sbjct: 61 VGAWLQSIGLQKGARVALMMPNVLQYPIAIAAVLRAGYVIVNVNPLYKPRELEHQLTDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAI +LENFA TL+KV+A T +KH++VA+MG+L G LKG +VN VVRHVKK+VPA+SLP Sbjct: 121 AEAIIILENFAATLEKVIASTQVKHVIVATMGDLFGGLKGGIVNFVVRHVKKMVPAYSLP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 A+ F + L QA G TLQ L H D+AFLQYTGGTTG AKGA+LTHRN++ANVLQ E W Sbjct: 181 QAVPFKEVLRQAAGMTLQRPALGHQDLAFLQYTGGTTGTAKGAMLTHRNIIANVLQNEAW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 ++P L QL+FVCALPLYHIFALT C MLGT G +NLLIPNPRDIPGF+KEL K Sbjct: 241 ISPVLNTLPKDKQLIFVCALPLYHIFALTTCGMLGTHLGVMNLLIPNPRDIPGFIKELMK 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 YKV+ PAVNTLYN LLNN DFA++DFS + C GGGMAVQK V DKW+++TGC I EGY Sbjct: 301 YKVHFLPAVNTLYNGLLNNPDFAKVDFSELKLCNGGGMAVQKVVNDKWREVTGCAICEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSP A+ANP T +E+TGTIGLP+ STE I+D D VP G GEIAIRGPQVM G Sbjct: 361 GLSETSPTATANPPTTNEFTGTIGLPVSSTELKIIDSDDNEVPHGSAGEIAIRGPQVMAG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW P ETA+ MT DGFFKTGDIG+MDERG+TKIVDRKKDMILVSGFNVYP+E+EGVVA Sbjct: 421 YWNNPVETAQSMTADGFFKTGDIGIMDERGFTKIVDRKKDMILVSGFNVYPSEIEGVVAA 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 HPGVLECAC+GVPDEHTGEAVKLFVVR+D L+ A+LM YC+EQFTGYKKPK IEFR EL Sbjct: 481 HPGVLECACIGVPDEHTGEAVKLFVVRRDPALTEAELMAYCREQFTGYKKPKSIEFRTEL 540 Query: 541 PKTNVGKILRRELRDEPAKA 560 PK+NVGKILRRELRDE A Sbjct: 541 PKSNVGKILRRELRDEKKPA 560 >ref|YP_297198.1| acyl-CoA synthetase [Ralstonia eutropha JMP134] gb|AAZ62354.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134] Length = 560 Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/555 (70%), Positives = 461/555 (83%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 M+RFWL YPAGVPAEID ++ SL Q+++ +F +ADR+A+VCM K ++Y ELD +S Sbjct: 1 MDRFWLKHYPAGVPAEIDASQFRSLAQLLEHSFRTYADRRAFVCMDKAITYGELDRMSAH 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 WLQ GL+ GARVAIMMPNVLQYP+ +AA+LRAG+ VVNVNPLYT RELEHQLKDSG Sbjct: 61 FAAWLQSRGLRPGARVAIMMPNVLQYPVVLAAVLRAGFVVVNVNPLYTPRELEHQLKDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAI +LENFA TLQ+V+A T +KH+VVASMG+LLG LKG +VN VVR+VKK+VP W LP Sbjct: 121 AEAIVILENFATTLQQVLARTPVKHVVVASMGDLLGGLKGAIVNFVVRNVKKMVPEWELP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 N + F+ L++ R TLQP T DD+AFLQYTGGTTGV+KGAVL HRN+VANVLQ+E W Sbjct: 181 NCVRFNAVLAEGRKLTLQPATTGPDDVAFLQYTGGTTGVSKGAVLLHRNVVANVLQSEAW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 + PAL G PI+Q+V + ALPLYHIFALTVC +LG R G +++LIPNPRDIPGF+KEL K Sbjct: 241 MQPALNKGAPIEQVVTITALPLYHIFALTVCCLLGMRNGGMSVLIPNPRDIPGFIKELQK 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 YK + FPAVNTLYNALLNN + ++DFSG R GGGMAVQ++VA +W TGCPIIEGY Sbjct: 301 YKFHMFPAVNTLYNALLNNPEIGKVDFSGLRVANGGGMAVQEAVAKQWLAKTGCPIIEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSP A+ NP + ++GTIGLPLPSTE AI DDDG+ VPLGQPGEI IRGPQVM G Sbjct: 361 GLSETSPSATCNPTDSNAFSGTIGLPLPSTEIAIRDDDGRDVPLGQPGEICIRGPQVMAG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW RPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNE+EGV A+ Sbjct: 421 YWNRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEGVAAE 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 PGVLE A VGVPD H+GE VKL+VV+KD L+ A ++++CKE+ TGYK+PKY+EFR EL Sbjct: 481 CPGVLEVAAVGVPDTHSGEVVKLYVVKKDPALTEADVIEFCKERLTGYKRPKYVEFRTEL 540 Query: 541 PKTNVGKILRRELRD 555 PKTNVGKILRRELRD Sbjct: 541 PKTNVGKILRRELRD 555 >ref|YP_585289.1| Long-chain-fatty-acid--CoA ligase [Cupriavidus metallidurans CH34] gb|ABF10020.1| acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase) [Cupriavidus metallidurans CH34] Length = 560 Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/556 (70%), Positives = 460/556 (82%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 ME+ WL +YPAGVPAEID ++ SL Q+++E+F +ADR+A++CM ++Y ELD LS A Sbjct: 1 MEKLWLKNYPAGVPAEIDASQFRSLAQLLEESFRTYADRRAFICMDHAITYGELDQLSHA 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 WLQ GL+ GAR+AIMMPNVLQYP+ +AA+LRAGY VVNVNPLYT RELEHQLKDSG Sbjct: 61 FAAWLQSRGLRPGARIAIMMPNVLQYPVVLAAVLRAGYVVVNVNPLYTPRELEHQLKDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAI +LENFA TLQ V++ T +KH+VVASMG+LLG +KG +VN VVR+VKK+VPAW LP Sbjct: 121 AEAIVILENFASTLQAVLSATPVKHVVVASMGDLLGTVKGAIVNFVVRNVKKMVPAWELP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 + + F L++ R TL+PV DD+AFLQYTGGTTGV+KGA L HRN+VANVLQ+E W Sbjct: 181 HCVRFKDVLAEGRKMTLKPVNTGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQSEAW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 + PAL G PIDQ+V + ALPLYHIFALTVC +LG R G L++LIPNPRDIPGF+KEL K Sbjct: 241 MQPALAKGAPIDQVVTITALPLYHIFALTVCCLLGMRSGGLSILIPNPRDIPGFIKELQK 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 YK + FPAVNTLYNALLN+ DFA++DFSG R GGGMAVQ++VA W TGCPIIEGY Sbjct: 301 YKFHMFPAVNTLYNALLNHPDFAKIDFSGLRVANGGGMAVQEAVAKNWLAKTGCPIIEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSP A+ NP D ++GTIGLPLPST+ +I DDDG +PLGQPGEI +RGPQVM G Sbjct: 361 GLSETSPSATCNPTDTDAFSGTIGLPLPSTDVSIRDDDGNELPLGQPGEICLRGPQVMAG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW RPDETAKVMT DGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVA+ Sbjct: 421 YWNRPDETAKVMTADGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAE 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 PGVLE A VGVPD+H+GE VKLFVV+KD LS A ++ +CK++ TGYK+PKY+EFR EL Sbjct: 481 CPGVLEVAAVGVPDQHSGEVVKLFVVKKDPALSEADVIAFCKDRLTGYKRPKYVEFRTEL 540 Query: 541 PKTNVGKILRRELRDE 556 PKTNVGKILRRELRD Sbjct: 541 PKTNVGKILRRELRDS 556 >ref|YP_727730.1| acyl-CoA synthetase [Ralstonia eutropha H16] emb|CAJ94362.1| Long-chain-fatty-acid-CoA ligase [Ralstonia eutropha H16] Length = 560 Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/556 (70%), Positives = 457/556 (82%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 MER WL YPAGVPAEID ++ SL +++ +F +ADR+A++CM K ++Y ELD LS Sbjct: 1 MERIWLKHYPAGVPAEIDASQFRSLAALLEASFRTYADRKAFICMDKAITYGELDQLSTH 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 WLQ GL+ GARVAIMMPNVLQYP+ +AA+LRAG+ VVNVNPLYT RELEHQLKDSG Sbjct: 61 FAAWLQSRGLRPGARVAIMMPNVLQYPVVLAAVLRAGFVVVNVNPLYTPRELEHQLKDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAI +LENFA TLQ+V+A T +KH+VVASMG++LG LKG +VN VVR+VKK+VPAW LP Sbjct: 121 AEAIVILENFASTLQQVLAKTPVKHVVVASMGDMLGGLKGAIVNFVVRNVKKMVPAWELP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 + F+ L++ R TLQP T DDIAFLQYTGGTTG++KGAVL HRN+VANVLQ+E W Sbjct: 181 TCVRFNSVLAEGRKLTLQPATTGPDDIAFLQYTGGTTGISKGAVLLHRNVVANVLQSEAW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 + PAL G IDQ + + ALPLYHIFALTVC +LG R G ++LIPNPRDIPGF+KEL K Sbjct: 241 MQPALNKGAHIDQPITITALPLYHIFALTVCCLLGMRSGGTSVLIPNPRDIPGFIKELQK 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 YK N FPAVNTLYNAL+NN + +++DFSG R GGGMAVQ++VA +W TGCPIIEGY Sbjct: 301 YKFNMFPAVNTLYNALINNPEISKVDFSGLRVANGGGMAVQEAVAKQWLAKTGCPIIEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSP A+ NP D ++GTIG+PLPSTE I DDDG+ VPLGQPGEI IRGPQVM G Sbjct: 361 GLSETSPSATCNPTDTDAFSGTIGMPLPSTEVVIRDDDGKDVPLGQPGEICIRGPQVMAG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW RPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVA+ Sbjct: 421 YWNRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAE 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 PGVLE A VGVPD H+GE VKLFVV+KD L+ A ++++CKE+ TGYK+PKY+EFR EL Sbjct: 481 CPGVLEVAAVGVPDTHSGEVVKLFVVKKDPGLTEADVIEFCKERLTGYKRPKYVEFRTEL 540 Query: 541 PKTNVGKILRRELRDE 556 PKTNVGKILRRELRD Sbjct: 541 PKTNVGKILRRELRDS 556 >ref|YP_002006735.1| long-chain-fatty-acid--CoA ligase [Cupriavidus taiwanensis LMG 19424] emb|CAQ70674.1| acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) [Cupriavidus taiwanensis LMG 19424] Length = 560 Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/556 (70%), Positives = 456/556 (82%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 MER WL YPAGVPAEID ++ SL +++ +F +ADR+A++CM K ++Y ELD LS Sbjct: 1 MERIWLKHYPAGVPAEIDASQFRSLAALLEASFHSYADRKAFICMDKAITYGELDRLSGH 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 WLQ GL+ GARVAIMMPNVLQYP+ +AA+LRAG+ VVNVNPLYT RELEHQLKDSG Sbjct: 61 FAAWLQSRGLRPGARVAIMMPNVLQYPVVLAAVLRAGFVVVNVNPLYTPRELEHQLKDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAI +LENFA TLQ+V+ T +KH+VVASMG++LG LKG +VN VVR+VKK+VPAW LP Sbjct: 121 AEAIVILENFAATLQQVLPRTPVKHVVVASMGDMLGGLKGAIVNFVVRNVKKMVPAWELP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 + + F+ L++ R TLQP T DDIAFLQYTGGTTGV+KGAVL HRN+VANVLQ+E W Sbjct: 181 HCVRFNSVLAEGRKLTLQPATTGPDDIAFLQYTGGTTGVSKGAVLLHRNVVANVLQSEAW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 + PAL G IDQ + + ALPLYHIFALTVC +LG R G ++LIPNPRDIPGF+KEL K Sbjct: 241 MQPALNKGAHIDQPITITALPLYHIFALTVCCLLGMRSGGTSVLIPNPRDIPGFIKELQK 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 YK N FPAVNTLYNALLNN + +++DFSG R GGGMAVQ++VA +W TGCPIIEGY Sbjct: 301 YKFNMFPAVNTLYNALLNNPEISKVDFSGLRVANGGGMAVQEAVARQWLAKTGCPIIEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSP A+ NP D ++GTIG+PLPSTE I DDDG VPLGQPGEI IRGPQVM G Sbjct: 361 GLSETSPSATCNPTDTDAFSGTIGMPLPSTEVVIRDDDGNDVPLGQPGEICIRGPQVMAG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW RPDETAKVMTPDGFFKTGDIGVMDERGYT+IVDRKKDMILVSGFNVYPNEVEGVVA+ Sbjct: 421 YWNRPDETAKVMTPDGFFKTGDIGVMDERGYTRIVDRKKDMILVSGFNVYPNEVEGVVAE 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 PGVLE A VGVPD H+GE VKLFVV+KD L+ A ++++CKE+ TGYK+PKY+EFR EL Sbjct: 481 CPGVLEVAAVGVPDTHSGEVVKLFVVKKDPALTEADVIEFCKERLTGYKRPKYVEFRTEL 540 Query: 541 PKTNVGKILRRELRDE 556 PKTNVGKILRRELRD Sbjct: 541 PKTNVGKILRRELRDS 556 >ref|YP_004687017.1| long-chain-fatty-acid--CoA ligase FadD [Cupriavidus necator N-1] gb|AEI78536.1| long-chain-fatty-acid--CoA ligase FadD [Cupriavidus necator N-1] Length = 560 Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/556 (70%), Positives = 457/556 (82%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 MER WL YPAGVPAEID ++ SL +++ +F +ADR+A++CM K ++Y ELD LS Sbjct: 1 MERIWLKHYPAGVPAEIDASQFRSLAALLEASFRTYADRKAFICMDKAITYGELDQLSAH 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 WLQ GL+ GARVAIMMPNVLQYP+ +AA+LRAG+ VVNVNPLYT RELEHQLKDSG Sbjct: 61 FAAWLQSRGLRPGARVAIMMPNVLQYPVVLAAVLRAGFVVVNVNPLYTPRELEHQLKDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAI +LENFA TLQ+V+A T +KH+VVASMG++LG LKG +VN VVR+VKK+VPAW LP Sbjct: 121 AEAIVILENFASTLQQVLAKTPVKHVVVASMGDMLGGLKGAIVNFVVRNVKKMVPAWELP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 N + F+ L++ R TLQP T +D+AFLQYTGGTTGV+KGAVL HRN+VANVLQ+E W Sbjct: 181 NCVRFNSVLAEGRKLTLQPATTGPEDVAFLQYTGGTTGVSKGAVLLHRNVVANVLQSEAW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 + PAL G IDQ + + ALPLYHIFALTVC +LG R G +LIPNPRDIPGF+KEL K Sbjct: 241 MQPALDKGAHIDQPITITALPLYHIFALTVCCLLGMRSGGTGVLIPNPRDIPGFIKELQK 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 Y+ N FPAVNTLYNALLNN + +++DFSG R GGGMAVQ++VA +W TGCPIIEGY Sbjct: 301 YRFNMFPAVNTLYNALLNNPEISKVDFSGLRVANGGGMAVQEAVAKQWLAKTGCPIIEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSP A+ NP + ++GTIG+PLPSTE I DDDG+ VPLGQPGEI IRGPQVM G Sbjct: 361 GLSETSPSATCNPTDTNVFSGTIGMPLPSTEVVIRDDDGKDVPLGQPGEICIRGPQVMAG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW RPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVA+ Sbjct: 421 YWNRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAE 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 PGVLE A VGVPD H+GE VKLFVV+KD L+ A ++++CKE+ TGYK+PKY+EFR EL Sbjct: 481 CPGVLEVAAVGVPDTHSGEVVKLFVVKKDPGLTEADVIEFCKERLTGYKRPKYVEFRTEL 540 Query: 541 PKTNVGKILRRELRDE 556 PKTNVGKILRRELRD Sbjct: 541 PKTNVGKILRRELRDS 556 >ref|ZP_02382310.1| acyl-CoA synthetase [Burkholderia ubonensis Bu] Length = 561 Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/556 (68%), Positives = 451/556 (81%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 MER WL SYP GVPA +DP RY SL ++DE+F A R AY CMG+ ++Y ELD+ SR Sbjct: 1 MERVWLKSYPEGVPATVDPDRYPSLAHLLDESFATFAARDAYACMGRTMTYAELDTYSRH 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 LG WLQ GL+KGARVA+MMPNVLQYPIA+AA LRAG+TVVNVNPLYT RELEHQL+DSG Sbjct: 61 LGAWLQHRGLRKGARVAVMMPNVLQYPIAVAAALRAGFTVVNVNPLYTPRELEHQLRDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAI VLENFA TLQ+V+A T ++H+ VAS+G+LLG ++G +VN V R VKKLVP + LP Sbjct: 121 AEAIVVLENFATTLQQVIARTGVRHVAVASLGDLLGPVRGMVVNFVARRVKKLVPPYRLP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 A F AL QP L HDD+AFLQYTGGTTGV+KGA LTHRN++AN+LQ + W Sbjct: 181 GATPFRTALRDGARHPFQPAALNHDDVAFLQYTGGTTGVSKGATLTHRNVIANILQNDAW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 PAL+ ID LV VCALPLYHI AL C ++G R GA+NLLIPNPRD+ GFVKEL++ Sbjct: 241 SQPALRKAPQIDALVTVCALPLYHILALNACMLMGARWGAMNLLIPNPRDVDGFVKELSR 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 ++VN FP VNTL+NALLN+ FA LDFSG R +GGGMAVQ++V+ +W K TGCPI+EGY Sbjct: 301 HRVNFFPGVNTLFNALLNHPGFAALDFSGLRITLGGGMAVQEAVSTRWMKTTGCPILEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSP + NP T+ +TGTIGLP+PST+ A+L ++ +PV GQPGEIAIRGPQVM G Sbjct: 361 GLSETSPSVTLNPPTLGAFTGTIGLPVPSTDIALLGENDEPVAQGQPGEIAIRGPQVMAG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW RPDETAKVMTPDGFFK+GD+GVMDE G+ +IVDRKKDMILVSGFNVYPNE+E VVA Sbjct: 421 YWNRPDETAKVMTPDGFFKSGDVGVMDEHGFVRIVDRKKDMILVSGFNVYPNEIENVVAA 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 HPGV+ECACVGVPD ++GEAVKLFVVR+D L+ LM YCK++FTGYKKPKYIEFRD L Sbjct: 481 HPGVVECACVGVPDSNSGEAVKLFVVRRDPALTTEALMAYCKKEFTGYKKPKYIEFRDSL 540 Query: 541 PKTNVGKILRRELRDE 556 PK+N+GKILRRELRDE Sbjct: 541 PKSNIGKILRRELRDE 556 >ref|YP_001098579.1| long-chain-fatty-acid--CoA ligase [Herminiimonas arsenicoxydans] emb|CAL60450.1| Long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase) [Herminiimonas arsenicoxydans] Length = 560 Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/556 (70%), Positives = 458/556 (82%) Query: 1 MERFWLASYPAGVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60 M++FWL SYP GVPAEID +Y SLV++++E+F ++ADR AYVCM K+L+Y E+D+LS+ Sbjct: 1 MDKFWLQSYPKGVPAEIDFTQYDSLVELLEESFRKYADRHAYVCMDKFLTYAEVDTLSQK 60 Query: 61 LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120 LG WLQG GLQKGARVA+MMPNVLQYP+A+AA+LRAGY VVNVNPLY REL+HQL DSG Sbjct: 61 LGAWLQGTGLQKGARVALMMPNVLQYPVALAAVLRAGYVVVNVNPLYKPRELQHQLVDSG 120 Query: 121 AEAIFVLENFACTLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWSLP 180 AEAI +LENFA TL+K++ T IKH+VVA+MG++LG LKG LVN VVRHVKK+VPA+SLP Sbjct: 121 AEAIIILENFATTLEKIIVSTQIKHVVVATMGDMLGGLKGLLVNFVVRHVKKMVPAFSLP 180 Query: 181 NAITFSQALSQARGKTLQPVTLTHDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEEW 240 A++F L+QA LQ L DIAFLQYTGGTTG AKGA+LTHRN+VAN+LQ E W Sbjct: 181 QAVSFKDVLAQAAHMHLQRPLLGPQDIAFLQYTGGTTGTAKGAMLTHRNIVANILQNEAW 240 Query: 241 LTPALKAGKPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIPGFVKELAK 300 + P L+ P L FVCALPLYHIFALT C MLGTR G +N+LIPNPRDIP VKEL K Sbjct: 241 IWPVLRKEPPDKTLNFVCALPLYHIFALTACCMLGTRLGVMNILIPNPRDIPSLVKELMK 300 Query: 301 YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY 360 YK+N PAVNTLYN LLNN DFA++DFS + C GGGMAVQ+ V D+W+ +TGC IIEGY Sbjct: 301 YKINLLPAVNTLYNGLLNNPDFAKVDFSELKLCNGGGMAVQQVVNDRWRVVTGCSIIEGY 360 Query: 361 GLSETSPIASANPCTIDEYTGTIGLPLPSTEFAILDDDGQPVPLGQPGEIAIRGPQVMPG 420 GLSETSP+A++NP E++GTIGLP+PSTE ILD + V LG GEIAIRGPQVM G Sbjct: 361 GLSETSPVATSNPVETTEFSGTIGLPVPSTEVMILDSNDNEVALGLSGEIAIRGPQVMAG 420 Query: 421 YWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFNVYPNEVEGVVAQ 480 YW P ETA+ MT DGFFKTGDIGVMD RGYT+IVDRKKDMILVSGFNVYP+E+E VVA Sbjct: 421 YWNNPAETAQAMTADGFFKTGDIGVMDARGYTRIVDRKKDMILVSGFNVYPSEIENVVAG 480 Query: 481 HPGVLECACVGVPDEHTGEAVKLFVVRKDKTLSAAQLMDYCKEQFTGYKKPKYIEFRDEL 540 HPGVLECAC+GVPDEHTGEAVKLFVVR+D L+A LM +CKEQFTGYKKPK IEFR EL Sbjct: 481 HPGVLECACIGVPDEHTGEAVKLFVVRRDPALTAEALMAFCKEQFTGYKKPKMIEFRTEL 540 Query: 541 PKTNVGKILRRELRDE 556 PK+NVGKILRRELRDE Sbjct: 541 PKSNVGKILRRELRDE 556