BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0028.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777242.1| glutamate/aspartate ABC transporter permease... 498 e-139 ref|YP_004754626.1| glutamate aspartate transport system permeas... 404 e-111 ref|ZP_08274377.1| Glutamate Aspartate transport system permease... 326 2e-87 ref|YP_001771319.1| polar amino acid ABC transporter inner membr... 300 2e-79 ref|YP_002499649.1| polar amino acid ABC transporter inner membr... 298 6e-79 ref|YP_001754934.1| polar amino acid ABC transporter inner membr... 298 7e-79 ref|NP_774239.1| amino acid ABC transporter permease protein [Br... 281 6e-74 ref|YP_004688443.1| glutamate/aspartate ABC transporter permease... 281 9e-74 ref|YP_001208012.1| glutamate/aspartate ABC transporter permease... 279 3e-73 ref|YP_001641404.1| polar amino acid ABC transporter inner membr... 278 6e-73 >ref|YP_003777242.1| glutamate/aspartate ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ65334.1| ABC-type glutamate/aspartate transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 249/249 (100%), Positives = 249/249 (100%) Query: 1 MHYNWNWGIFWEMSPDGIPYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPWV 60 MHYNWNWGIFWEMSPDGIPYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPWV Sbjct: 1 MHYNWNWGIFWEMSPDGIPYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPWV 60 Query: 61 VRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTSS 120 VRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTSS Sbjct: 61 VRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTSS 120 Query: 121 RVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNSS 180 RVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNSS Sbjct: 121 RVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNSS 180 Query: 181 VALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYIT 240 VALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYIT Sbjct: 181 VALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYIT 240 Query: 241 GGSTSAGGH 249 GGSTSAGGH Sbjct: 241 GGSTSAGGH 249 >ref|YP_004754626.1| glutamate aspartate transport system permease gltJ [Collimonas fungivorans Ter331] gb|AEK63803.1| Glutamate Aspartate transport system permease protein gltJ [Collimonas fungivorans Ter331] Length = 250 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/250 (78%), Positives = 223/250 (89%), Gaps = 1/250 (0%) Query: 1 MHYNWNWGIFWEMSPDGIP-YIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 MHYNWNWGIFW+ SPDG+ Y+DTLLAGLKWTLA +A AWIMAL++GT+ GT+RT W Sbjct: 1 MHYNWNWGIFWQESPDGVSTYMDTLLAGLKWTLALSASAWIMALVIGTVIGTIRTMPNKW 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 VR+ANGYVELFRNIPL+VQMFLWYFVMPE++PA IG+W+KSLP+ASF+TA LALGFFTS Sbjct: 61 AVRVANGYVELFRNIPLIVQMFLWYFVMPEIVPAGIGNWLKSLPNASFITAFLALGFFTS 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SR+AVQV+ GI ALPRGQ++AG ALGLT QTYRYVLLPM+FRIIIP+LTNEFAAIIKNS Sbjct: 121 SRIAVQVSAGINALPRGQKLAGTALGLTLPQTYRYVLLPMSFRIIIPSLTNEFAAIIKNS 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYI 239 SVALTIGLVELTAATYSMREFTFQTFEALTGAT+IYVIIS IAL +AR LEK A+PG+I Sbjct: 181 SVALTIGLVELTAATYSMREFTFQTFEALTGATVIYVIISGIALLLARWLEKAIAIPGFI 240 Query: 240 TGGSTSAGGH 249 GS + GGH Sbjct: 241 AAGSANTGGH 250 >ref|ZP_08274377.1| Glutamate Aspartate transport system permease protein gltJ [Oxalobacteraceae bacterium IMCC9480] gb|EGF32155.1| Glutamate Aspartate transport system permease protein gltJ [Oxalobacteraceae bacterium IMCC9480] Length = 247 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 169/250 (67%), Positives = 203/250 (81%), Gaps = 4/250 (1%) Query: 1 MHYNWNWGIFWEMSPDGI-PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 M+YNWNW IFW SPDG+ Y+DTL++GL WTLATA AW+MAL +G I GT+RT W Sbjct: 1 MNYNWNWQIFWAPSPDGVGTYMDTLVSGLVWTLATALTAWVMALFIGAIVGTIRTMPNRW 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 VR+ANGYVELFRNIPLLVQMFLWYFVMPEL+PA +G+W+K++P+A F+TA + LGFFTS Sbjct: 61 AVRLANGYVELFRNIPLLVQMFLWYFVMPELVPASMGNWLKAMPNAPFITAVICLGFFTS 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SRVAVQV+ GIQALPRGQ +AG ALGLT QTYR+VLLPMAFRI++P LT+EF IIKNS Sbjct: 121 SRVAVQVSAGIQALPRGQTLAGTALGLTLPQTYRHVLLPMAFRIVLPPLTSEFLNIIKNS 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYI 239 SVALTIGL+ELTA SM EF+FQ FEA T TIIY+++++I + + LLEK AVPG+I Sbjct: 181 SVALTIGLMELTARARSMSEFSFQVFEAFTAVTIIYIVVNIIVVNLMGLLEKKVAVPGFI 240 Query: 240 TGGSTSAGGH 249 GS GGH Sbjct: 241 VAGS---GGH 247 >ref|YP_001771319.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium sp. 4-46] gb|ACA18885.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium sp. 4-46] Length = 240 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 148/238 (62%), Positives = 182/238 (76%), Gaps = 1/238 (0%) Query: 1 MHYNWNWGIFWEMSPDGI-PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 M+YNWNW IF+E SP+G Y D LL+GL WT+ TA CAW++A +G++ G +RT + Sbjct: 1 MNYNWNWSIFFEPSPEGTGTYADMLLSGLLWTIVTALCAWVIAFAVGSVIGVMRTLPNRF 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 NGYVELFRNIPLLVQMFLW+FV+PE+LP G W+K LPDA F TA + LGFFT+ Sbjct: 61 AQAFGNGYVELFRNIPLLVQMFLWFFVLPEMLPQSWGTWLKQLPDAPFYTAVVCLGFFTA 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SRVA QV GIQALPRGQRMAG ALGLT QTYRYVLLP A+RII+P LT+EF +KN+ Sbjct: 121 SRVAEQVRAGIQALPRGQRMAGTALGLTTSQTYRYVLLPNAYRIILPPLTSEFLNNLKNT 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPG 237 SVALTIGL+ELTA SM+EF+FQ FEA T ATI+Y+II+++ + A LE+ A+PG Sbjct: 181 SVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIINLLVVTAAGYLERKVAIPG 238 >ref|YP_002499649.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium nodulans ORS 2060] gb|ACL59346.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium nodulans ORS 2060] Length = 240 Score = 298 bits (762), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 147/238 (61%), Positives = 182/238 (76%), Gaps = 1/238 (0%) Query: 1 MHYNWNWGIFWEMSPDGI-PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 M+YNWNW IF+++SP+G Y D LL+GL WT+ TA CAWI+A +G++ G +RT Sbjct: 1 MNYNWNWSIFFDLSPEGTGTYADMLLSGLVWTIVTALCAWIIAFAVGSVIGVMRTLPNRA 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 NGYVE+FRNIPLLVQMFLW+FV+PELLP G W+K LPDA F TA + LGFFT+ Sbjct: 61 AQAFGNGYVEVFRNIPLLVQMFLWFFVLPELLPQDWGTWLKQLPDAPFYTAVVCLGFFTA 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SRVA QV GIQ+LPRGQRMAG ALGLT QTYRYVLLP A+RII+P LT+EF +KN+ Sbjct: 121 SRVAEQVRAGIQSLPRGQRMAGTALGLTTGQTYRYVLLPNAYRIILPPLTSEFLNNLKNT 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPG 237 SVALTIGL+ELTA SM+EF+FQ FEA T ATI+Y+II+++ + A LE+ A+PG Sbjct: 181 SVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIINLVVVTAAGFLERKVAIPG 238 >ref|YP_001754934.1| polar amino acid ABC transporter inner membrane protein [Methylobacterium radiotolerans JCM 2831] gb|ACB24251.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium radiotolerans JCM 2831] Length = 240 Score = 298 bits (762), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 146/238 (61%), Positives = 181/238 (76%), Gaps = 1/238 (0%) Query: 1 MHYNWNWGIFWEMSPDGI-PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 M+YNWNW IF++ SP+G Y+D LL+GL WT+ TA C+W++A LG++ G LRT Sbjct: 1 MNYNWNWRIFFDASPEGNGTYLDMLLSGLMWTITTALCSWVIAFFLGSLIGVLRTLPSKP 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 I YVELFRN+PLLVQMFLWYFV+PE++P IGD IK LPDA F TA + LGFFT+ Sbjct: 61 ANAIGTAYVELFRNVPLLVQMFLWYFVLPEVVPTRIGDAIKQLPDAPFYTAVVCLGFFTA 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 SRVA QV GIQ+LPRGQRMAG A+G T QTYRYVLLP A+RII+P +T+EF +KN+ Sbjct: 121 SRVAEQVRAGIQSLPRGQRMAGTAMGFTTYQTYRYVLLPNAYRIILPPMTSEFLNNLKNT 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPG 237 SVALTIGL+ELTA SM+EF+FQ FEA T ATI+YVII+++ + A LEK A+PG Sbjct: 181 SVALTIGLLELTARARSMQEFSFQVFEAFTAATILYVIINLVVVTAATFLEKAVAIPG 238 >ref|NP_774239.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52864.1| amino acid ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 243 Score = 281 bits (719), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 139/242 (57%), Positives = 180/242 (74%), Gaps = 1/242 (0%) Query: 1 MHYNWNWGIFWEMSPDGI-PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 M+Y+WNWGIF+E +P G Y+D LL+GL TL TA AWI+AL+ G++ G +RT Sbjct: 1 MNYHWNWGIFFEPNPMGTGTYLDMLLSGLVLTLKTAVLAWIIALVFGSLVGVMRTLPSKA 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 R +VE FRN+PLLVQ+FLW+FV+PELLP G W+K LP+A F TA + +GFF S Sbjct: 61 AYRFGFCWVEFFRNMPLLVQLFLWFFVLPELLPKSAGLWLKQLPNAPFWTAAIGIGFFMS 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 +RVAVQ+ GI +LPRGQ+MA ALGLT VQ YRYVLLPMAFRII+P LT+EF IKN+ Sbjct: 121 ARVAVQLQAGIGSLPRGQKMAATALGLTTVQGYRYVLLPMAFRIILPPLTSEFLNTIKNT 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYI 239 +VA+TIGL+ELT SM+EF+FQ FEA T ATI+Y++++ + + R LE+ A+PGYI Sbjct: 181 AVAITIGLIELTGQARSMQEFSFQVFEAFTAATILYLLVNAVVVTAMRFLERYVAIPGYI 240 Query: 240 TG 241 TG Sbjct: 241 TG 242 >ref|YP_004688443.1| glutamate/aspartate ABC transporter permease GltJ [Cupriavidus necator N-1] gb|AEI82405.1| glutamate/aspartate ABC transport system permease protein GltJ [Cupriavidus necator N-1] Length = 243 Score = 281 bits (718), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 134/242 (55%), Positives = 187/242 (77%), Gaps = 1/242 (0%) Query: 1 MHYNWNWGIFWEMSPDGI-PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 M+Y+WNWGIF+E SPDG Y+ TL GL+WTLATA AW++AL++G++ G +RT P Sbjct: 1 MNYHWNWGIFFEPSPDGAGTYLYTLYLGLRWTLATALSAWVIALVVGSVIGIMRTLPSPA 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 R+ +VELFRN+PLL+Q+FLWYFV+PE+LP G+W+K LP+A F TA + +GF+ S Sbjct: 61 AQRVGRAWVELFRNVPLLMQLFLWYFVLPEVLPGKAGEWLKQLPNAPFFTAVMGIGFYMS 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 +RVA Q+ +GI ++ RGQR AG ALG + +QTYRYVLLP+A+RII+P LT++F + IKN+ Sbjct: 121 ARVAEQLRSGIGSISRGQRYAGMALGFSTLQTYRYVLLPVAWRIILPPLTSDFLSTIKNT 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYI 239 SVALTIGLVELT+ Y+++E +FQ FEA + ATI Y++++++ R+LE+ AVPGY Sbjct: 181 SVALTIGLVELTSRAYAIQEQSFQFFEAFSAATITYLLLNLLVTSGMRMLERKLAVPGYS 240 Query: 240 TG 241 TG Sbjct: 241 TG 242 >ref|YP_001208012.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL79797.1| glutamate/aspartate ABC transporter (permease protein) [Bradyrhizobium sp. ORS 278] Length = 243 Score = 279 bits (714), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 139/242 (57%), Positives = 179/242 (73%), Gaps = 1/242 (0%) Query: 1 MHYNWNWGIFWEMSPDGI-PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 M+Y WNW IF E +P G Y D LLAGLK T+ T+ AW++ALI GTI G LR+ Sbjct: 1 MNYTWNWHIFLEPNPTGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKL 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 I YVE FRN+PLLVQ+FLW+FV+PELLP G W+K +P+A F TA + +G F S Sbjct: 61 AGWIGFLYVEFFRNMPLLVQLFLWFFVLPELLPRAAGLWLKQMPNAPFFTAAVGIGLFMS 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 +RVAVQ+ GI +LPRGQ+MA ALGLT +Q YRYVLLPMAFRII+P LT+EF +KNS Sbjct: 121 ARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPMAFRIILPPLTSEFLNTVKNS 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPGYI 239 +VA+TIGL+ELT A +M+EF+FQ FEA + AT++Y++I++I + RLLE+ A+PGYI Sbjct: 181 AVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGMRLLERAVAIPGYI 240 Query: 240 TG 241 TG Sbjct: 241 TG 242 >ref|YP_001641404.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium extorquens PA1] ref|YP_002423034.1| polar amino acid ABC transporter inner membrane subunit [Methylobacterium chloromethanicum CM4] gb|ABY32333.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium extorquens PA1] gb|ACK85106.1| polar amino acid ABC transporter, inner membrane subunit [Methylobacterium chloromethanicum CM4] Length = 240 Score = 278 bits (710), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 142/238 (59%), Positives = 175/238 (73%), Gaps = 1/238 (0%) Query: 1 MHYNWNWGIFWEMSPDGI-PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPW 59 M+Y WNWGIF E SP+G Y D LL+GL WT+ TA C+W +A LG++ G +RT Sbjct: 1 MNYTWNWGIFLEPSPEGAGTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRT 60 Query: 60 VVRIANGYVELFRNIPLLVQMFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTS 119 I YVE FRN+PLLVQMFLWYFV+PELLPA +G +K +PDA F TA L LGFFT+ Sbjct: 61 ANAIGAAYVEGFRNVPLLVQMFLWYFVLPELLPARLGSAVKQMPDAPFYTAVLCLGFFTA 120 Query: 120 SRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFAAIIKNS 179 +RVA QV GI+ALPRGQ AG ALGLT QTYR VLLP A+RII+P LT+EF +KN+ Sbjct: 121 ARVAEQVRAGIRALPRGQAQAGLALGLTWAQTYRAVLLPNAYRIILPPLTSEFLNNLKNT 180 Query: 180 SVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVTAVPG 237 SVALTIGL+ELTA SM+EF+FQ FEA T AT++YV ++++ + A LLE+ AVPG Sbjct: 181 SVALTIGLLELTARARSMQEFSFQVFEAFTAATLLYVALNLVVIAGATLLERRVAVPG 238