BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0022.p (111 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777236.1| 50S ribosomal protein L13 [Herbaspirillum se... 229 1e-58 ref|YP_001351984.1| 50S ribosomal protein L13 [Janthinobacterium... 217 6e-55 ref|YP_004754614.1| 50S ribosomal protein L13p (L13Ae) [Collimon... 215 2e-54 ref|ZP_08275136.1| LSU ribosomal protein L13p (L13Ae) [Oxalobact... 211 3e-53 ref|YP_001098598.1| 50S ribosomal protein L13 [Herminiimonas ars... 211 3e-53 ref|ZP_01915930.1| 50S ribosomal protein L13 [Limnobacter sp. ME... 203 7e-51 ref|ZP_04578040.1| LSU ribosomal protein L13P [Oxalobacter formi... 201 3e-50 ref|ZP_04577952.1| LSU ribosomal protein L13P [Oxalobacter formi... 201 3e-50 ref|YP_560379.1| 50S ribosomal protein L13 [Burkholderia xenovor... 200 7e-50 ref|NP_518611.1| 50S ribosomal protein L13 [Ralstonia solanacear... 199 9e-50 >ref|YP_003777236.1| 50S ribosomal protein L13 [Herbaspirillum seropedicae SmR1] gb|ADJ65328.1| 50S ribosomal subunit L13 protein [Herbaspirillum seropedicae SmR1] Length = 142 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 111/111 (100%), Positives = 111/111 (100%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK Sbjct: 32 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL Sbjct: 92 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 142 >ref|YP_001351984.1| 50S ribosomal protein L13 [Janthinobacterium sp. Marseille] sp|A6SUN7.1|RL13_JANMA RecName: Full=50S ribosomal protein L13 gb|ABR88804.1| large subunit ribosomal protein L13 [Janthinobacterium sp. Marseille] Length = 142 Score = 217 bits (552), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 104/111 (93%), Positives = 107/111 (96%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VALRLRGKHKPEFTPHVDTGDFIVV+NAGKLRVTGTKATEKTY+RHSGYPGGIYETNFLK Sbjct: 32 VALRLRGKHKPEFTPHVDTGDFIVVINAGKLRVTGTKATEKTYYRHSGYPGGIYETNFLK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYA+ HPHAAQQPK L L Sbjct: 92 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEATHPHAAQQPKALEL 142 >ref|YP_004754614.1| 50S ribosomal protein L13p (L13Ae) [Collimonas fungivorans Ter331] gb|AEK63791.1| LSU ribosomal protein L13p (L13Ae) [Collimonas fungivorans Ter331] Length = 142 Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 103/111 (92%), Positives = 106/111 (95%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VALRLRGKHKPEFTPHVDTGDFIVV+NAGKLRVTG KAT+KTYFRHSGYPGGIYETNF K Sbjct: 32 VALRLRGKHKPEFTPHVDTGDFIVVINAGKLRVTGAKATDKTYFRHSGYPGGIYETNFQK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADG+HPH AQQPK L L Sbjct: 92 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGSHPHTAQQPKALEL 142 >ref|ZP_08275136.1| LSU ribosomal protein L13p (L13Ae) [Oxalobacteraceae bacterium IMCC9480] gb|EGF31395.1| LSU ribosomal protein L13p (L13Ae) [Oxalobacteraceae bacterium IMCC9480] Length = 142 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 99/111 (89%), Positives = 106/111 (95%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VALRLRGKHKPEFTPHVDTGDFI+V+NAGKLRVTG+KATE+TY+RHSGYPGGIYETNFLK Sbjct: 32 VALRLRGKHKPEFTPHVDTGDFIIVINAGKLRVTGSKATERTYYRHSGYPGGIYETNFLK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQQRFPGRALEKAVKGMLPKGPLGYAMI KLKVYA+ HPH+AQQPK L L Sbjct: 92 MQQRFPGRALEKAVKGMLPKGPLGYAMITKLKVYAEATHPHSAQQPKVLEL 142 >ref|YP_001098598.1| 50S ribosomal protein L13 [Herminiimonas arsenicoxydans] sp|A4G1T2.1|RL13_HERAR RecName: Full=50S ribosomal protein L13 emb|CAL60469.1| 50S ribosomal protein L13 [Herminiimonas arsenicoxydans] Length = 142 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 102/111 (91%), Positives = 106/111 (95%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKAT+KTY+RHSGYPGGIYETNF K Sbjct: 32 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATDKTYYRHSGYPGGIYETNFKK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQ+RFPGRALEKAVKGMLPKGPLGYAMIKKLKVYA+ HPHAAQQPK L L Sbjct: 92 MQERFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEETHPHAAQQPKALEL 142 >ref|ZP_01915930.1| 50S ribosomal protein L13 [Limnobacter sp. MED105] gb|EDM82734.1| 50S ribosomal protein L13 [Limnobacter sp. MED105] Length = 142 Score = 203 bits (516), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 96/111 (86%), Positives = 102/111 (91%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VA RLRGKHKPEFTPH+DTGDFIVVVNAGKLRVTGTK K YFRHSGYPGGIYETNF K Sbjct: 32 VARRLRGKHKPEFTPHIDTGDFIVVVNAGKLRVTGTKGLNKKYFRHSGYPGGIYETNFDK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQ+RFPGRALEKAVKGMLPKGPLGYAMIKKLK+YA+ HPH+AQQPKPL + Sbjct: 92 MQERFPGRALEKAVKGMLPKGPLGYAMIKKLKIYAEAEHPHSAQQPKPLEI 142 >ref|ZP_04578040.1| LSU ribosomal protein L13P [Oxalobacter formigenes OXCC13] gb|EEO29013.1| LSU ribosomal protein L13P [Oxalobacter formigenes OXCC13] Length = 142 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 94/111 (84%), Positives = 102/111 (91%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VA RLRGKHKPEFTPHVDTGDFI+V+NA KLRVTG K T+K Y+RHSG+PGGIYET+F K Sbjct: 32 VAHRLRGKHKPEFTPHVDTGDFIIVINASKLRVTGNKMTDKKYYRHSGFPGGIYETSFEK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAD HPH+AQQPKPL + Sbjct: 92 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADETHPHSAQQPKPLEI 142 >ref|ZP_04577952.1| LSU ribosomal protein L13P [Oxalobacter formigenes HOxBLS] gb|EEO28914.1| LSU ribosomal protein L13P [Oxalobacter formigenes HOxBLS] Length = 142 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 94/111 (84%), Positives = 102/111 (91%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VA RLRGKHKPEFTPHVDTGD+I+VVNA KLRVTG K T+K Y+RHSG+PGGIYET+F K Sbjct: 32 VARRLRGKHKPEFTPHVDTGDYIIVVNASKLRVTGNKMTDKKYYRHSGFPGGIYETSFEK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAD HPH+AQQPKPL + Sbjct: 92 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADETHPHSAQQPKPLEI 142 >ref|YP_560379.1| 50S ribosomal protein L13 [Burkholderia xenovorans LB400] ref|YP_001896969.1| 50S ribosomal protein L13 [Burkholderia phytofirmans PsJN] ref|ZP_06845751.1| ribosomal protein L13 [Burkholderia sp. Ch1-1] sp|Q13UB2.1|RL13_BURXL RecName: Full=50S ribosomal protein L13 sp|B2SYL0.1|RL13_BURPP RecName: Full=50S ribosomal protein L13 gb|ABE32327.1| LSU ribosomal protein L13P [Burkholderia xenovorans LB400] gb|ACD17745.1| ribosomal protein L13 [Burkholderia phytofirmans PsJN] gb|EFG66609.1| ribosomal protein L13 [Burkholderia sp. Ch1-1] Length = 142 Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 94/111 (84%), Positives = 102/111 (91%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VA RLRGKHKPEFTPHVDTGDFI+V+NAGKLRVTG KAT+K Y+RHSGYPGGIYET F K Sbjct: 32 VAHRLRGKHKPEFTPHVDTGDFIIVINAGKLRVTGNKATDKKYYRHSGYPGGIYETTFGK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQ+RFPGRALEKAVKGMLPKGPLGYAMIKKLKVYA+ HPH+AQQPK L + Sbjct: 92 MQERFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEATHPHSAQQPKALEI 142 >ref|NP_518611.1| 50S ribosomal protein L13 [Ralstonia solanacearum GMI1000] ref|ZP_00946310.1| LSU ribosomal protein L13P [Ralstonia solanacearum UW551] ref|YP_002258731.1| 50s ribosomal protein l13 [Ralstonia solanacearum IPO1609] ref|YP_003753497.1| 50S ribosomal subunit protein L13 [Ralstonia solanacearum PSI07] ref|YP_003746755.1| 50S ribosomal protein L13 [Ralstonia solanacearum CFBP2957] sp|Q8Y246.1|RL13_RALSO RecName: Full=50S ribosomal protein L13 emb|CAD14018.1| probable 50s ribosomal protein l13 [Ralstonia solanacearum GMI1000] gb|EAP71172.1| LSU ribosomal protein L13P [Ralstonia solanacearum UW551] emb|CAQ56789.1| 50s ribosomal protein l13 [Ralstonia solanacearum MolK2] emb|CAQ60656.1| 50s ribosomal protein l13 [Ralstonia solanacearum IPO1609] emb|CBJ39164.1| 50S ribosomal subunit protein L13 [Ralstonia solanacearum CMR15] emb|CBJ44171.1| 50S ribosomal subunit protein L13 [Ralstonia solanacearum CFBP2957] emb|CBJ52240.1| 50S ribosomal subunit protein L13 [Ralstonia solanacearum PSI07] gb|AEG70194.1| 50s ribosomal protein l13 [Ralstonia solanacearum Po82] emb|CCA81184.1| 50S ribosomal subunit protein L13 [blood disease bacterium R229] emb|CCA88862.1| 50S ribosomal subunit protein L13 [Ralstonia syzygii R24] Length = 142 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 94/111 (84%), Positives = 102/111 (91%) Query: 1 VALRLRGKHKPEFTPHVDTGDFIVVVNAGKLRVTGTKATEKTYFRHSGYPGGIYETNFLK 60 VALRLRGKHKPEFTPHVDTGDFI+V+NA KLRVTG K T+K Y+RHSGYPGGIYET F K Sbjct: 32 VALRLRGKHKPEFTPHVDTGDFIIVINAAKLRVTGAKTTDKKYYRHSGYPGGIYETTFGK 91 Query: 61 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYADGNHPHAAQQPKPLAL 111 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYA+G+HPH AQQP+ L + Sbjct: 92 MQQRFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAEGSHPHEAQQPQVLEI 142