BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0018.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777233.1| hypothetical protein Hsero_3847 [Herbaspiril... 350 2e-94 ref|YP_001351987.1| hypothetical protein mma_0297 [Janthinobacte... 199 5e-49 ref|YP_001098601.1| putative signal peptide [Herminiimonas arsen... 198 5e-49 ref|YP_004754611.1| hypothetical protein CFU_3965 [Collimonas fu... 185 4e-45 ref|ZP_08275139.1| putative signal peptide containing protein [O... 144 1e-32 ref|ZP_00946312.1| Hypothetical Protein RRSL_00981 [Ralstonia so... 131 9e-29 emb|CAQ56791.1| putative dna binding; protein [Ralstonia solanac... 129 5e-28 emb|CBJ39162.1| putative dna binding; transmembrane protein [Ral... 127 1e-27 gb|AEG70192.1| putative dna binding; protein [Ralstonia solanace... 126 3e-27 ref|YP_002980361.1| hypothetical protein Rpic12D_0383 [Ralstonia... 126 3e-27 >ref|YP_003777233.1| hypothetical protein Hsero_3847 [Herbaspirillum seropedicae SmR1] gb|ADJ65325.1| conserved hypothetical transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 236 Score = 350 bits (897), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 193/217 (88%), Positives = 196/217 (90%), Gaps = 9/217 (4%) Query: 10 MTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQGDASEQVEQ 69 MTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQGDASEQVEQ Sbjct: 1 MTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQGDASEQVEQ 60 Query: 70 LSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQKEDLAFFDSL 129 LSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQKEDLAFFDSL Sbjct: 61 LSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQKEDLAFFDSL 120 Query: 130 LPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNIVQGGKSAII 189 LPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNIVQGGKSAII Sbjct: 121 LPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNIVQGGKSAII 180 Query: 190 NFPE-----LPRARFSGK*FDRPRALSARIQVLPEGG 221 NFPE L R R + K + R L +PEG Sbjct: 181 NFPESNSTDLARYRLAFKYYQRVEGLLN----IPEGA 213 >ref|YP_001351987.1| hypothetical protein mma_0297 [Janthinobacterium sp. Marseille] gb|ABR91099.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 251 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 102/206 (49%), Positives = 143/206 (69%), Gaps = 5/206 (2%) Query: 4 RLLRRRMTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQGDA 63 +L RR +ISAP+MTIK HLPWPL A+ A+VV +G A A+W Y LGR+ G + G Sbjct: 14 KLWLRRWSISAPRMTIKNHLPWPLRAVFIAIVVGLGGAMAMWAYDLGRS-FTGFK-PGAT 71 Query: 64 SEQVEQLSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQKEDL 123 S Q+ ++ EQ+++ SAE ++ ++ NA++++L I +S QAQL+ Q+K LE+E + KEDL Sbjct: 72 SAQLAEVQEQLQQTSAERDKFETTVNAAESQLNIERSLQAQLSRQIKTLESENAKLKEDL 131 Query: 124 AFFDSLLPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNIVQG 183 AFF+SLLPT+ GA GITI+R KAE P QLRYR+L+MQGG F GN QL V +VQ Sbjct: 132 AFFESLLPTDTGAQGITIRRLKAEMVEPAQLRYRLLLMQGGKAGHDFTGNYQLIVTLVQD 191 Query: 184 GKSAIINFP---ELPRARFSGK*FDR 206 GKSA++ FP E+ + + S + + R Sbjct: 192 GKSAMMTFPKPDEVDKFKLSFRHYQR 217 >ref|YP_001098601.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL60472.1| conserved hypothetical protein ; putative exported protein [Herminiimonas arsenicoxydans] Length = 255 Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 106/221 (47%), Positives = 151/221 (68%), Gaps = 9/221 (4%) Query: 4 RLLRRRMTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQGDA 63 +L +R +ISAP+MTIK HLPWPL ++ AVV+ + AA A+W Y LGR+ GL +G + Sbjct: 18 KLWWQRWSISAPRMTIKNHLPWPLRVIVIAVVLGLSAAIAMWAYDLGRS-FTGLN-KGAS 75 Query: 64 SEQVEQLSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQKEDL 123 + Q+ ++ EQ+K++SAE +R Q+ NA++++L I +S QAQL Q+K LE+E ++ K+DL Sbjct: 76 APQLAEIQEQIKQISAERDRFQTTVNAAESQLNIERSLQAQLTWQIKTLESENSKLKDDL 135 Query: 124 AFFDSLLPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNIVQG 183 +FF+SLLPTN G GITI+RFKA+ A P QLRYR+L+MQGG F G+ QL V +VQ Sbjct: 136 SFFESLLPTNTGVQGITIRRFKADIAEPGQLRYRLLLMQGGKLVSDFIGHYQLVVTLVQE 195 Query: 184 GKSAIINFPE---LPRARFSGK*FDRPRALSARIQVLPEGG 221 GKSAI+ P+ + R S + + R + A LPEG Sbjct: 196 GKSAIMTLPKPDAADKFRLSFRHYQRIEGVLA----LPEGA 232 >ref|YP_004754611.1| hypothetical protein CFU_3965 [Collimonas fungivorans Ter331] gb|AEK63788.1| conserved hypothetical protein , putative signal peptide [Collimonas fungivorans Ter331] Length = 244 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 95/195 (48%), Positives = 127/195 (65%), Gaps = 9/195 (4%) Query: 1 VKYRLLRRRMTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRN---HLPGL 57 +KY+L RRM+ISAPKMT+K H PWPL AL +V+ G A A+W Y LGR+ H P + Sbjct: 1 MKYKLWVRRMSISAPKMTVKSHYPWPLKALFLVLVLGFGGAIALWIYDLGRDFTGHSPAV 60 Query: 58 QLQGDASEQVEQLSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEIN 117 + +Q+ +L+E+V L+AE +R S NA+++ L I ++AQ QL Q+K LE + Sbjct: 61 -----SKQQLAELNEKVGALTAERDRFSSTVNAAESRLNIEKAAQEQLGQQIKVLEIQNA 115 Query: 118 RQKEDLAFFDSLLPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLS 177 + KEDLAFF+ LLP G+ GITIQR AE P QLRYR+L+MQGG G F GN+QL Sbjct: 116 KLKEDLAFFEGLLPNATGSQGITIQRLTAELLTPTQLRYRMLIMQGGKGA-NFVGNVQLL 174 Query: 178 VNIVQGGKSAIINFP 192 V GKS ++ FP Sbjct: 175 VTATVAGKSTVLTFP 189 >ref|ZP_08275139.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31398.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] Length = 211 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 79/159 (49%), Positives = 102/159 (64%), Gaps = 5/159 (3%) Query: 35 VVAVGAAAAVWTYQLGRNHL-PGLQLQGDASEQVEQLSEQVKKLSAENERLQSASNASQN 93 +A+G AAA+W Y LGR G +Q +AS +QL KLSAE +R S NAS++ Sbjct: 4 TIALGGAAALWIYDLGRQFTGSGQPVQQNASAYQQQLD----KLSAERDRYSSTVNASES 59 Query: 94 ELKIAQSAQAQLATQVKNLEAEINRQKEDLAFFDSLLPTNLGAPGITIQRFKAEQAAPNQ 153 +L I +SAQ QLA QVK LE E R KEDLAFF+SLLPT G P ++I+R + NQ Sbjct: 60 QLMIERSAQTQLAAQVKVLETENARLKEDLAFFESLLPTGTGGPEVSIRRLTVDMVGQNQ 119 Query: 154 LRYRVLVMQGGGGTQQFAGNLQLSVNIVQGGKSAIINFP 192 +RYR+L+MQG G F G LQL+V +Q G+S +I FP Sbjct: 120 VRYRLLLMQGARGKSDFIGTLQLAVTTLQAGRSTVILFP 158 >ref|ZP_00946312.1| Hypothetical Protein RRSL_00981 [Ralstonia solanacearum UW551] gb|EAP71174.1| Hypothetical Protein RRSL_00981 [Ralstonia solanacearum UW551] Length = 251 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 82/197 (41%), Positives = 125/197 (63%), Gaps = 8/197 (4%) Query: 1 VKYRLLRRRMTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQ 60 +K R L RR+++ AP +T++ LPWP+ LL AVVV AAA+W ++ GR L G Sbjct: 1 MKGRRLLRRVSVLAPNVTVRSRLPWPVTVLLVAVVVGPAGAAALWAFEEGR-RLTGPH-D 58 Query: 61 GDASEQVEQLSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQK 120 D +L+ ++ + AE ++L +++ +++ L +A+ AQ Q+A Q+K LEAE + K Sbjct: 59 ADLRAMNRELNARLVGVQAERDKLAASAGTAESRLGMAEGAQQQMAEQLKALEAENAQLK 118 Query: 121 EDLAFFDSLLPTNLGAPGITIQRFKA--EQAAPNQLRYRVLVMQGGGG----TQQFAGNL 174 EDLAFFDSLLP + GI ++ F+ ++A P +LR+RVL+MQGGG +F G L Sbjct: 119 EDLAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPARLRFRVLLMQGGGKAFAPVSEFEGQL 178 Query: 175 QLSVNIVQGGKSAIINF 191 L++N+VQ GK A I+F Sbjct: 179 ALTLNVVQAGKPATIDF 195 >emb|CAQ56791.1| putative dna binding; protein [Ralstonia solanacearum MolK2] Length = 251 Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 127/198 (64%), Gaps = 8/198 (4%) Query: 1 VKYRLLRRRMTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQ 60 +K R L RR+++ AP +T++ LPWP+ LL AVVV + AA A+W ++ GR L G Sbjct: 1 MKGRRLLRRVSVLAPNVTVRSRLPWPVTVLLVAVVVGLAAAVALWAFEEGR-RLTGPH-D 58 Query: 61 GDASEQVEQLSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQK 120 D +L+ ++ + AE ++L +++ +++ L +A+ AQ Q+A Q+K LEAE + K Sbjct: 59 ADLRAMNRELNARLVAVQAERDKLAASAGTAESRLGMAEGAQQQMAEQLKALEAENAQLK 118 Query: 121 EDLAFFDSLLPTNLGAPGITIQRFKA--EQAAPNQLRYRVLVMQGGGG----TQQFAGNL 174 EDLAFFDSLLP + GI ++ F+ ++A P +LR+RVL+MQGGG +F G L Sbjct: 119 EDLAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPARLRFRVLLMQGGGKAFAPVSEFEGQL 178 Query: 175 QLSVNIVQGGKSAIINFP 192 L++N+VQ GK A I+FP Sbjct: 179 ALTLNVVQAGKPATIDFP 196 >emb|CBJ39162.1| putative dna binding; transmembrane protein [Ralstonia solanacearum CMR15] Length = 251 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/197 (42%), Positives = 125/197 (63%), Gaps = 8/197 (4%) Query: 1 VKYRLLRRRMTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQ 60 +K R L RR+++ AP +T++ LPWP+ LL AVVV + AAAA+W ++ GR L G Sbjct: 1 MKGRRLLRRVSVLAPNVTVRSRLPWPVTILLIAVVVGLAAAAALWAFEEGR-RLTGPH-D 58 Query: 61 GDASEQVEQLSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQK 120 D +L ++ L AE ++L +++ ++ L +A+ AQ Q+A Q+K LEAE + K Sbjct: 59 ADLRAMNRELGTKLATLQAERDKLAASAGTAEARLGMAEGAQQQMAEQIKALEAENAQLK 118 Query: 121 EDLAFFDSLLPTNLGAPGITIQRFKA--EQAAPNQLRYRVLVMQGGGG----TQQFAGNL 174 EDLAFFDSLLP + GI ++ F+ ++A P +LR+RVL+MQGGG +F G L Sbjct: 119 EDLAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPARLRFRVLLMQGGGKAFAPVSEFEGQL 178 Query: 175 QLSVNIVQGGKSAIINF 191 L++N+VQ GK A I+F Sbjct: 179 ALTLNVVQAGKPATIDF 195 >gb|AEG70192.1| putative dna binding; protein [Ralstonia solanacearum Po82] Length = 251 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 125/197 (63%), Gaps = 8/197 (4%) Query: 1 VKYRLLRRRMTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQ 60 +K R L RR+++ AP +T++ LPWP+ LL AVVV + A A+W ++ GR L G Sbjct: 1 MKGRRLLRRVSVLAPNVTVRSRLPWPVTVLLVAVVVGLAGAVALWAFEEGR-RLTGPH-D 58 Query: 61 GDASEQVEQLSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQK 120 D +L+ ++ + AE ++L +++ +++ L +A+ AQ Q+A Q+K LEAE + K Sbjct: 59 ADLRAMNRELNARLVAVQAERDKLAASAGTAESRLGMAEGAQQQMAEQLKALEAENAQLK 118 Query: 121 EDLAFFDSLLPTNLGAPGITIQRFKA--EQAAPNQLRYRVLVMQGGGG----TQQFAGNL 174 EDLAFFDSLLP + GI ++ F+ ++A P +LR+RVL+MQGGG +F G L Sbjct: 119 EDLAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPARLRFRVLLMQGGGKAFAPVSEFEGQL 178 Query: 175 QLSVNIVQGGKSAIINF 191 L++N+VQ GK A I+F Sbjct: 179 ALTLNVVQAGKPATIDF 195 >ref|YP_002980361.1| hypothetical protein Rpic12D_0383 [Ralstonia pickettii 12D] gb|ACS61689.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 251 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 125/198 (63%), Gaps = 8/198 (4%) Query: 1 VKYRLLRRRMTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQ 60 +K R L RR ++ AP +T++ LPWP+ LL AVV+ + AAAA+W ++ GR L G Sbjct: 1 MKARRLLRRASVLAPNVTVRSRLPWPVTVLLVAVVLGLAAAAALWAFEEGR-RLTGPH-D 58 Query: 61 GDASEQVEQLSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQK 120 D +L+ ++ + AE ++L +++ L IA+ AQAQ+A Q+K LE E + K Sbjct: 59 ADLRAMNRELAAKLAAVQAERDKLSASAGTVDARLGIAEGAQAQMAEQLKALETENAQLK 118 Query: 121 EDLAFFDSLLPTNLGAPGITIQRFKA--EQAAPNQLRYRVLVMQGGGG----TQQFAGNL 174 EDLAFFDSLLP + GI ++ F+ ++A P ++R+RVL+MQGGG +F G L Sbjct: 119 EDLAFFDSLLPAPTNSAGIYVRSFRIAPDEAQPTRMRFRVLLMQGGGKAFAPVSEFEGQL 178 Query: 175 QLSVNIVQGGKSAIINFP 192 L++N+VQGGK A I+FP Sbjct: 179 ALTLNVVQGGKPATIDFP 196