BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0017.p (116 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777232.1| integral membrane protein [Herbaspirillum se... 231 2e-59 ref|YP_004754610.1| hypothetical protein CFU_3964 [Collimonas fu... 161 3e-38 ref|ZP_08275140.1| Integral membrane protein CcmA involved in ce... 159 1e-37 ref|YP_001098602.1| hypothetical protein HEAR0244 [Herminiimonas... 151 3e-35 ref|YP_001351988.1| hypothetical protein mma_0298 [Janthinobacte... 145 2e-33 ref|YP_004236423.1| hypothetical protein Acav_3966 [Acidovorax a... 130 6e-29 ref|YP_550901.1| hypothetical protein Bpro_4110 [Polaromonas sp.... 130 6e-29 ref|YP_984950.1| hypothetical protein Ajs_0628 [Acidovorax sp. J... 129 1e-28 ref|YP_997402.1| hypothetical protein Veis_2641 [Verminephrobact... 127 4e-28 ref|YP_001897959.1| hypothetical protein Rpic_0369 [Ralstonia pi... 127 8e-28 >ref|YP_003777232.1| integral membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65324.1| integral membrane protein involved in cell shape determination protein [Herbaspirillum seropedicae SmR1] Length = 131 Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 1 MSTSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIG 60 MSTSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIG Sbjct: 16 MSTSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIG 75 Query: 61 DVHSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQAEEAPVLKLAASSEA 116 DVHSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQAEEAPVLKLAASSEA Sbjct: 76 DVHSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQAEEAPVLKLAASSEA 131 >ref|YP_004754610.1| hypothetical protein CFU_3964 [Collimonas fungivorans Ter331] gb|AEK63787.1| hypothetical protein CFU_3964 [Collimonas fungivorans Ter331] Length = 131 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 83/115 (72%), Positives = 95/115 (82%) Query: 2 STSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIGD 61 STSI+GDV FKGGLRIDG++ GN+ AE G+ SVLVISE AKV G V AHL+VNGEI G+ Sbjct: 17 STSIEGDVHFKGGLRIDGNVKGNVVAEPGETSVLVISESAKVEGDVRVAHLVVNGEISGN 76 Query: 62 VHSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQAEEAPVLKLAASSEA 116 V+S+ELLELQPKARITG+V YKALEMH GALVSGKL+H+Q PVLKLA S A Sbjct: 77 VYSAELLELQPKARITGDVNYKALEMHSGALVSGKLTHEQNVAEPVLKLAMSQSA 131 >ref|ZP_08275140.1| Integral membrane protein CcmA involved in cell shape determination [Oxalobacteraceae bacterium IMCC9480] gb|EGF31399.1| Integral membrane protein CcmA involved in cell shape determination [Oxalobacteraceae bacterium IMCC9480] Length = 134 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 81/111 (72%), Positives = 93/111 (83%), Gaps = 1/111 (0%) Query: 1 MSTSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIG 60 +STSI GDV FKGGLRIDGH+ GN+ A G+ S+LVISE AK+ G V AHL+VNGEI+G Sbjct: 16 ISTSIVGDVHFKGGLRIDGHVKGNVIANPGETSMLVISEQAKIEGDVRVAHLVVNGEIVG 75 Query: 61 DVHSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQAEEAPVLKLA 111 V S+ELLELQPKARITG+VYYKALEMHGGA+VSGKL+HD E PVLKLA Sbjct: 76 QVFSAELLELQPKARITGDVYYKALEMHGGAVVSGKLTHDLVGE-PVLKLA 125 >ref|YP_001098602.1| hypothetical protein HEAR0244 [Herminiimonas arsenicoxydans] emb|CAL60473.1| Conserved hypothetical protein, putative protein CcmA [Herminiimonas arsenicoxydans] Length = 134 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 76/110 (69%), Positives = 94/110 (85%), Gaps = 1/110 (0%) Query: 2 STSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIGD 61 +T+I G+V FKGGLRIDG + G++ A+ + S+LVISEHAKV G+V AHL+VNG I+G Sbjct: 17 ATNIAGNVHFKGGLRIDGCVKGDVIADADETSMLVISEHAKVEGEVRVAHLLVNGVIVGP 76 Query: 62 VHSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQAEEAPVLKLA 111 V+SSELLELQPKARITG+V+YKALEMHGGA+VSGKL+HD EE P+LKLA Sbjct: 77 VYSSELLELQPKARITGDVHYKALEMHGGAVVSGKLTHDTMEE-PILKLA 125 >ref|YP_001351988.1| hypothetical protein mma_0298 [Janthinobacterium sp. Marseille] gb|ABR90401.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 133 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 75/110 (68%), Positives = 91/110 (82%), Gaps = 2/110 (1%) Query: 2 STSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIGD 61 ST I G+V FKGGLRIDG + G++ A+ + S+LVISEHA+V G+V AHL+VNGEI+G Sbjct: 17 STIISGNVHFKGGLRIDGCVKGDVIAQADEISMLVISEHARVEGEVRVAHLLVNGEIVGP 76 Query: 62 VHSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQAEEAPVLKLA 111 V SSELLELQPKARITG+V YKALEMHGGA+VSGKL+H+ E P+LKLA Sbjct: 77 VFSSELLELQPKARITGDVNYKALEMHGGAVVSGKLTHEVDE--PILKLA 124 >ref|YP_004236423.1| hypothetical protein Acav_3966 [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47856.1| protein of unknown function DUF583 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 133 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 66/115 (57%), Positives = 88/115 (76%), Gaps = 3/115 (2%) Query: 3 TSIKGDVGFKGGLRIDGHINGNINAETGQ-PSVLVISEHAKVVGQVHAAHLIVNGEIIGD 61 T I G+V F GLRIDG + G++ A+ G+ ++LV+SE A+V G VHAAH+I+NG ++G Sbjct: 18 TRINGEVVFAEGLRIDGEVAGDVRAQDGEHATILVVSESARVEGAVHAAHVIINGTVVGP 77 Query: 62 VHSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQA--EEAPVLKLAASS 114 VH++ELLELQPKARITGNV+YKALEMH GA +SG++S EE P LKLA+ + Sbjct: 78 VHAAELLELQPKARITGNVHYKALEMHQGATISGQMSPTTVLIEEKPTLKLASKA 132 >ref|YP_550901.1| hypothetical protein Bpro_4110 [Polaromonas sp. JS666] gb|ABE46003.1| protein of unknown function DUF583 [Polaromonas sp. JS666] Length = 148 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 67/115 (58%), Positives = 85/115 (73%), Gaps = 3/115 (2%) Query: 3 TSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIGDV 62 + I+G + F GLRIDG + G+I A G PS+LVISE A V G VHA H+I+NG ++G V Sbjct: 18 SCIEGSLKFTDGLRIDGEVIGDIRANEGSPSILVISESAVVTGLVHADHVIINGRVMGPV 77 Query: 63 HSSELLELQPKARITGNVYYKALEMHGGALVSGKL---SHDQAEEAPVLKLAASS 114 H+SELLELQPKARI G+V YKALEMH GA++ G+L + Q EE P LKLAA++ Sbjct: 78 HASELLELQPKARIEGDVAYKALEMHQGAVIFGQLRPTTLQQLEEKPPLKLAANN 132 >ref|YP_984950.1| hypothetical protein Ajs_0628 [Acidovorax sp. JS42] ref|YP_002552087.1| hypothetical protein Dtpsy_0607 [Acidovorax ebreus TPSY] gb|ABM40874.1| protein of unknown function DUF583 [Acidovorax sp. JS42] gb|ACM32087.1| protein of unknown function DUF583 [Acidovorax ebreus TPSY] Length = 132 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/116 (55%), Positives = 90/116 (77%), Gaps = 4/116 (3%) Query: 3 TSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIGDV 62 T ++GDV F GLR+DG + G++ + + +PS++V+SE AKV G VHAAH+IVNG + G V Sbjct: 18 TRVQGDVLFADGLRVDGEVIGDLRS-SAEPSIVVVSESAKVEGAVHAAHVIVNGTVEGPV 76 Query: 63 HSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQA---EEAPVLKLAASSE 115 H++ELLE+QPKARITGNV+YKALEMH GA+++G+L EE P LKLA++++ Sbjct: 77 HATELLEVQPKARITGNVHYKALEMHQGAVIAGQLCPAAPLLLEEKPTLKLASNAQ 132 >ref|YP_997402.1| hypothetical protein Veis_2641 [Verminephrobacter eiseniae EF01-2] gb|ABM58384.1| protein of unknown function DUF583 [Verminephrobacter eiseniae EF01-2] Length = 134 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/113 (59%), Positives = 86/113 (76%), Gaps = 2/113 (1%) Query: 5 IKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIGDVHS 64 I+GDV F GLRIDG + GNI A QPS+LVISE A+V G VHA H+IVNG++IG VH+ Sbjct: 22 IEGDVHFVEGLRIDGVVAGNIRAGAEQPSILVISETARVEGMVHADHVIVNGQVIGTVHA 81 Query: 65 SELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQ--AEEAPVLKLAASSE 115 +ELLELQPKA+I G+V+YKALEMH G ++G+L AE+ P L+LA+S + Sbjct: 82 AELLELQPKAQIEGDVHYKALEMHQGGTIAGQLFPTSVLAEQKPPLELASSRQ 134 >ref|YP_001897959.1| hypothetical protein Rpic_0369 [Ralstonia pickettii 12J] ref|ZP_07674581.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] gb|ACD25527.1| protein of unknown function DUF583 [Ralstonia pickettii 12J] gb|EFP67045.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] Length = 134 Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 3/116 (2%) Query: 3 TSIKGDVGFKGGLRIDGHINGNINAETGQPSVLVISEHAKVVGQVHAAHLIVNGEIIGDV 62 T ++GD+ F GGLRIDG I GNI + +PS+LVI++ A+V G+VH HLI+NG ++G V Sbjct: 19 TKLEGDLRFSGGLRIDGEIKGNIYGDPDKPSMLVITDSARVEGEVHVGHLILNGTVVGPV 78 Query: 63 HSSELLELQPKARITGNVYYKALEMHGGALVSGKLSHDQAEEA---PVLKLAASSE 115 H +ELLELQPKARI GNV Y ALEMH GA+V G L+H + P LKLA++ + Sbjct: 79 HVAELLELQPKARIEGNVQYAALEMHQGAVVMGTLTHATPGDVKLLPNLKLASNQD 134