BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0003.p (92 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777219.1| exodeoxyribonuclease VII small subunit [Herb... 142 2e-32 ref|YP_001098633.1| exodeoxyribonuclease VII small subunit [Herm... 122 1e-26 ref|YP_001352019.1| exodeoxyribonuclease VII small subunit [Jant... 122 1e-26 ref|YP_004751389.1| exodeoxyribonuclease VII small subunit [Coll... 120 7e-26 ref|ZP_08274829.1| Putative Exodeoxyribonuclease VII small subun... 114 4e-24 ref|YP_727181.1| exodeoxyribonuclease VII small subunit [Ralston... 103 1e-20 ref|YP_004686427.1| exodeoxyribonuclease 7 small subunit [Cupria... 100 1e-19 ref|YP_001899994.1| exodeoxyribonuclease VII small subunit [Rals... 100 1e-19 ref|YP_295103.1| exodeoxyribonuclease VII small subunit [Ralston... 98 4e-19 ref|NP_520344.1| exodeoxyribonuclease VII small subunit [Ralston... 98 5e-19 >ref|YP_003777219.1| exodeoxyribonuclease VII small subunit [Herbaspirillum seropedicae SmR1] gb|ADJ65311.1| exodeoxyribonuclease VII small subunit protein [Herbaspirillum seropedicae SmR1] Length = 92 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/92 (97%), Positives = 92/92 (100%) Query: 1 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFC 60 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELV+FC Sbjct: 1 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVKFC 60 Query: 61 AAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 AAQLDKVDTQVKLLEGDMLKPFQAA+MDGEEG Sbjct: 61 AAQLDKVDTQVKLLEGDMLKPFQAADMDGEEG 92 >ref|YP_001098633.1| exodeoxyribonuclease VII small subunit [Herminiimonas arsenicoxydans] sp|A4G1W7.1|EX7S_HERAR RecName: Full=Exodeoxyribonuclease 7 small subunit; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit emb|CAL60504.1| Exodeoxyribonuclease VII small subunit (Exonuclease VII small subunit) (XseB) [Herminiimonas arsenicoxydans] Length = 84 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/72 (81%), Positives = 68/72 (94%) Query: 13 AASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFCAAQLDKVDTQVK 72 + SA LP+SFE+AM ELEQLVA+MEAGELPLEASVAAYKRGSELV++CAAQL+KVD+QVK Sbjct: 5 STSAALPSSFEEAMAELEQLVARMEAGELPLEASVAAYKRGSELVKYCAAQLEKVDSQVK 64 Query: 73 LLEGDMLKPFQA 84 +LEGDMLKPF A Sbjct: 65 VLEGDMLKPFNA 76 >ref|YP_001352019.1| exodeoxyribonuclease VII small subunit [Janthinobacterium sp. Marseille] sp|A6SUS2.1|EX7S_JANMA RecName: Full=Exodeoxyribonuclease 7 small subunit; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit gb|ABR91684.1| exodeoxyribonuclease VII small subunit [Janthinobacterium sp. Marseille] Length = 84 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/72 (81%), Positives = 67/72 (93%) Query: 13 AASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFCAAQLDKVDTQVK 72 + SA LP+SFE+AM ELEQLVA+MEAGELPLEASVAAYKRGSELV++CAAQL+KVD QVK Sbjct: 5 STSAALPSSFEEAMAELEQLVARMEAGELPLEASVAAYKRGSELVKYCAAQLEKVDNQVK 64 Query: 73 LLEGDMLKPFQA 84 +LEGDMLKPF A Sbjct: 65 VLEGDMLKPFNA 76 >ref|YP_004751389.1| exodeoxyribonuclease VII small subunit [Collimonas fungivorans Ter331] gb|AEK60566.1| Exodeoxyribonuclease VII small subunit [Collimonas fungivorans Ter331] Length = 87 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 62/92 (67%), Positives = 70/92 (76%), Gaps = 8/92 (8%) Query: 1 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFC 60 MP+ + S+ PASFEQAM ELEQLVAQMEAGELPLEASVAAYKRGSELV+FC Sbjct: 1 MPKNPISTSS--------PASFEQAMAELEQLVAQMEAGELPLEASVAAYKRGSELVKFC 52 Query: 61 AAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 A QL+KVD+QVK+LEGDMLKPF + G Sbjct: 53 ALQLEKVDSQVKVLEGDMLKPFTGEALKDHSG 84 >ref|ZP_08274829.1| Putative Exodeoxyribonuclease VII small subunit (Exonuclease VII small subunit) (XseB) [Oxalobacteraceae bacterium IMCC9480] gb|EGF31700.1| Putative Exodeoxyribonuclease VII small subunit (Exonuclease VII small subunit) (XseB) [Oxalobacteraceae bacterium IMCC9480] Length = 93 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/78 (75%), Positives = 66/78 (84%), Gaps = 2/78 (2%) Query: 15 SAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFCAAQLDKVDTQVKLL 74 SA PASFE AM EL +LVAQMEAGELPLEASVAAYKRGSELV+FCA QLDKVD+QV++L Sbjct: 17 SADTPASFEDAMAELARLVAQMEAGELPLEASVAAYKRGSELVKFCAVQLDKVDSQVRVL 76 Query: 75 EGDMLKPFQAAEMDGEEG 92 EGDMLKP + + GE G Sbjct: 77 EGDMLKPLDS--VAGEAG 92 >ref|YP_727181.1| exodeoxyribonuclease VII small subunit [Ralstonia eutropha H16] emb|CAJ93813.1| Exonuclease VII small subunit [Ralstonia eutropha H16] Length = 102 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/97 (56%), Positives = 74/97 (76%), Gaps = 7/97 (7%) Query: 1 MPRTSAT-----ASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSE 55 MP+T+ +A ++ASAP PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+E Sbjct: 1 MPKTTTAPVQTDNTADTSASAP-PASYEAAMAELETLVASMESGELPLEASLAAYRRGAE 59 Query: 56 LVRFCAAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 LVR+C +L++V+ QV++LEGD+LKP A E +G G Sbjct: 60 LVRYCQQKLERVEQQVRVLEGDVLKPL-AGEGNGANG 95 >ref|YP_004686427.1| exodeoxyribonuclease 7 small subunit [Cupriavidus necator N-1] gb|AEI77946.1| exodeoxyribonuclease 7 small subunit [Cupriavidus necator N-1] Length = 104 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/85 (61%), Positives = 66/85 (77%), Gaps = 4/85 (4%) Query: 1 MPRT---SATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELV 57 MP+T +AASAP PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELV Sbjct: 1 MPKTMTAPVQTDDTTAASAP-PASYEAAMAELETLVASMESGELPLEASLAAYRRGAELV 59 Query: 58 RFCAAQLDKVDTQVKLLEGDMLKPF 82 R+C +L++V+ QVK+LEGD+LKP Sbjct: 60 RYCQQKLERVEQQVKVLEGDVLKPL 84 >ref|YP_001899994.1| exodeoxyribonuclease VII small subunit [Ralstonia pickettii 12J] ref|ZP_07676449.1| exodeoxyribonuclease VII, small subunit [Ralstonia sp. 5_7_47FAA] sp|B2U932.1|EX7S_RALPJ RecName: Full=Exodeoxyribonuclease 7 small subunit; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit gb|ACD27562.1| exodeoxyribonuclease VII, small subunit [Ralstonia pickettii 12J] gb|EFP65021.1| exodeoxyribonuclease VII, small subunit [Ralstonia sp. 5_7_47FAA] Length = 94 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/92 (54%), Positives = 66/92 (71%) Query: 1 MPRTSATASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRFC 60 MPR A +ASA + PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELV++C Sbjct: 1 MPRAPNDAPSASATPSATPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVKYC 60 Query: 61 AAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 L++V+ QV++L+GD LKP E+G Sbjct: 61 QQVLERVEQQVRVLDGDALKPLGDDSNTNEQG 92 >ref|YP_295103.1| exodeoxyribonuclease VII small subunit [Ralstonia eutropha JMP134] gb|AAZ60259.1| Exodeoxyribonuclease VII small subunit [Ralstonia eutropha JMP134] Length = 103 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 50/85 (58%), Positives = 66/85 (77%), Gaps = 4/85 (4%) Query: 1 MPRTSAT---ASAASAASAPLPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELV 57 MP+T+ +A SAP PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELV Sbjct: 1 MPKTTTDPVQTEDTAAGSAP-PASYEAAMAELETLVASMESGELPLEASLAAYRRGAELV 59 Query: 58 RFCAAQLDKVDTQVKLLEGDMLKPF 82 R+C +L++V+ QV++LEGD+LKP Sbjct: 60 RYCQQKLERVEQQVRVLEGDVLKPM 84 >ref|NP_520344.1| exodeoxyribonuclease VII small subunit [Ralstonia solanacearum GMI1000] sp|Q8XX93.1|EX7S_RALSO RecName: Full=Exodeoxyribonuclease 7 small subunit; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit emb|CAD15930.1| probable exodeoxyribonuclease vII small subunit (exonuclease vII small subunit) protein [Ralstonia solanacearum GMI1000] Length = 94 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 2/93 (2%) Query: 1 MPRTSATASAASAASAP-LPASFEQAMQELEQLVAQMEAGELPLEASVAAYKRGSELVRF 59 MPR A + + S+P PAS+E AM ELE LVA ME+GELPLEAS+AAY+RG+ELVR+ Sbjct: 1 MPRAQDVAQSDATLSSPATPASYEAAMAELETLVASMESGELPLEASLAAYRRGAELVRY 60 Query: 60 CAAQLDKVDTQVKLLEGDMLKPFQAAEMDGEEG 92 C L++V+ QV++L+GD LKP A E E+G Sbjct: 61 CQQVLERVEQQVRVLDGDALKPL-AGEGTNEQG 92