BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0023.p (157 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773536.1| 50s ribosomal protein L1 [Herbaspirillum ser... 310 6e-83 ref|YP_004751051.1| 50S ribosomal protein L1p (L10Ae) [Collimona... 288 1e-76 ref|ZP_08274678.1| LSU ribosomal protein L1p (L10Ae) [Oxalobacte... 285 2e-75 ref|YP_001101406.1| 50S ribosomal protein L1 [Herminiimonas arse... 283 6e-75 ref|ZP_04579986.1| large subunit ribosomal protein L1 [Oxalobact... 279 1e-73 ref|ZP_04577836.1| large subunit ribosomal protein L1 [Oxalobact... 276 9e-73 ref|YP_003744363.1| 50S ribosomal protein L1 [Ralstonia solanace... 271 3e-71 ref|YP_003751137.1| 50S ribosomal subunit protein L1, regulates ... 271 3e-71 ref|YP_002910152.1| 50S ribosomal protein L1 [Burkholderia gluma... 270 5e-71 ref|ZP_00946356.1| LSU ribosomal protein L1P [Ralstonia solanace... 270 5e-71 >ref|YP_003773536.1| 50s ribosomal protein L1 [Herbaspirillum seropedicae SmR1] gb|ADJ61628.1| 50s ribosomal subunit L1 protein [Herbaspirillum seropedicae SmR1] Length = 231 Score = 310 bits (793), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 157/157 (100%), Positives = 157/157 (100%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR Sbjct: 75 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID Sbjct: 135 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLAA 157 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLAA Sbjct: 195 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLAA 231 >ref|YP_004751051.1| 50S ribosomal protein L1p (L10Ae) [Collimonas fungivorans Ter331] gb|AEK60228.1| LSU ribosomal protein L1p (L10Ae) [Collimonas fungivorans Ter331] Length = 231 Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 141/157 (89%), Positives = 154/157 (98%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFASG+KAE AKAAGAD+VGMEDLAE++KAG+MPFDIVIASPDTMRIVGTLGQILGPR Sbjct: 75 VAVFASGEKAEQAKAAGADIVGMEDLAEQIKAGNMPFDIVIASPDTMRIVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVT DVATAVKNAKAGQVQYRTDK+GI+HATIGRKSFSDA+LK+NLLALID Sbjct: 135 GLMPNPKVGTVTADVATAVKNAKAGQVQYRTDKAGIVHATIGRKSFSDAELKSNLLALID 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLAA 157 AL+KAKPA+SKGVYLRKI+LSSTMGAGVRVDQ +LAA Sbjct: 195 ALSKAKPATSKGVYLRKISLSSTMGAGVRVDQTTLAA 231 >ref|ZP_08274678.1| LSU ribosomal protein L1p (L10Ae) [Oxalobacteraceae bacterium IMCC9480] gb|EGF31849.1| LSU ribosomal protein L1p (L10Ae) [Oxalobacteraceae bacterium IMCC9480] Length = 231 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 139/156 (89%), Positives = 150/156 (96%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFA+G+KAE AKAAGAD+VGMEDLAE++KAG+MPFDIVIASPDTMRIVGTLGQILGPR Sbjct: 75 VAVFATGEKAEQAKAAGADIVGMEDLAEQIKAGNMPFDIVIASPDTMRIVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDK GIIHATIGRKSF+D LK+NL+ALID Sbjct: 135 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKGGIIHATIGRKSFTDEALKSNLVALID 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLA 156 ALNKAKP SSKGVYLRK++LSSTMGAGVRVD ASLA Sbjct: 195 ALNKAKPTSSKGVYLRKVSLSSTMGAGVRVDHASLA 230 >ref|YP_001101406.1| 50S ribosomal protein L1 [Herminiimonas arsenicoxydans] sp|A4G9U8.1|RL1_HERAR RecName: Full=50S ribosomal protein L1 emb|CAL63285.1| 50S ribosomal subunit protein L1 [Herminiimonas arsenicoxydans] Length = 231 Score = 283 bits (724), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 137/157 (87%), Positives = 151/157 (96%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFA+G+KAE AKAAGAD+VGMEDLAE +KAG+MPFDIVIASPDTMRIVGTLGQILGPR Sbjct: 75 VAVFATGEKAEQAKAAGADIVGMEDLAESIKAGNMPFDIVIASPDTMRIVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 G+MPNPKVGTVTPDVATAVKNAKAGQVQYRTDK+GIIHATIGRKSF+D LK+NLLALID Sbjct: 135 GMMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKAGIIHATIGRKSFTDEALKSNLLALID 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLAA 157 AL KAKPA+SKGVYLRK++LSSTMGAGVR+DQ +LAA Sbjct: 195 ALTKAKPATSKGVYLRKVSLSSTMGAGVRIDQTTLAA 231 >ref|ZP_04579986.1| large subunit ribosomal protein L1 [Oxalobacter formigenes OXCC13] gb|EEO30959.1| large subunit ribosomal protein L1 [Oxalobacter formigenes OXCC13] Length = 231 Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 135/156 (86%), Positives = 150/156 (96%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFASG+KA+ AKAAGAD+VGME+LA ++K GDMPFDIVIASPDTMRIVGTLGQILGPR Sbjct: 75 VAVFASGEKADQAKAAGADIVGMEELAAQIKGGDMPFDIVIASPDTMRIVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTD++GIIHATIGRKSFSDADLK+NL +LID Sbjct: 135 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDRAGIIHATIGRKSFSDADLKSNLSSLID 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLA 156 ALNKAKP SSKG Y+RKI++SSTMGAGVRVDQA++A Sbjct: 195 ALNKAKPVSSKGTYIRKISISSTMGAGVRVDQATIA 230 >ref|ZP_04577836.1| large subunit ribosomal protein L1 [Oxalobacter formigenes HOxBLS] gb|EEO28798.1| large subunit ribosomal protein L1 [Oxalobacter formigenes HOxBLS] Length = 231 Score = 276 bits (705), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 131/157 (83%), Positives = 151/157 (96%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFASG+KAE AKAAGAD+VGME+LA ++K GD+PFD+VIASPDTMRIVG LGQILGPR Sbjct: 75 VAVFASGEKAEQAKAAGADIVGMEELAAQIKGGDIPFDVVIASPDTMRIVGALGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVTPDVATAV+NAKAGQVQYRTD++GIIHATIGRKSFSDA+LK+NL+AL++ Sbjct: 135 GLMPNPKVGTVTPDVATAVRNAKAGQVQYRTDRAGIIHATIGRKSFSDAELKSNLVALME 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLAA 157 ALNKAKP SSKG Y+RK+++SSTMGAGVRVDQAS+AA Sbjct: 195 ALNKAKPVSSKGTYIRKVSISSTMGAGVRVDQASIAA 231 >ref|YP_003744363.1| 50S ribosomal protein L1 [Ralstonia solanacearum CFBP2957] emb|CBJ41719.1| 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11 [Ralstonia solanacearum CFBP2957] Length = 231 Score = 271 bits (692), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/156 (83%), Positives = 146/156 (93%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFA G+KAE AKAAGA++VGMEDLAE++KAG M FD+VIASPDTMR+VGTLGQILGPR Sbjct: 75 VAVFAQGEKAEQAKAAGAEIVGMEDLAEQIKAGKMDFDVVIASPDTMRVVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVTPDVATAVKNAKAGQVQ+R DK+GIIHATIGR+SF A LK+NL AL+D Sbjct: 135 GLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGIIHATIGRRSFESAALKSNLAALLD 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLA 156 ALNKAKPASSKGVYLRKIA+SSTMG GVR+DQA+LA Sbjct: 195 ALNKAKPASSKGVYLRKIAVSSTMGVGVRIDQATLA 230 >ref|YP_003751137.1| 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11 [Ralstonia solanacearum PSI07] emb|CBJ49828.1| 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11 [Ralstonia solanacearum PSI07] emb|CCA81268.1| 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11 [blood disease bacterium R229] emb|CCA85402.1| 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11 [Ralstonia syzygii R24] Length = 231 Score = 271 bits (692), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/157 (83%), Positives = 147/157 (93%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFA G+KAE AKAAGA++VGMEDLAE++KAG+M FD+VIASPDTMR+VGTLGQILGPR Sbjct: 75 VAVFAQGEKAEQAKAAGAEIVGMEDLAEQIKAGNMDFDVVIASPDTMRVVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVTPDVATAVKNAKAGQVQ+R DK+GIIHATIGR+SF LK+NL AL+D Sbjct: 135 GLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGIIHATIGRRSFEPTALKSNLAALLD 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLAA 157 ALNKAKPASSKGVYLRKIA+SSTMG GVR+DQA+LAA Sbjct: 195 ALNKAKPASSKGVYLRKIAVSSTMGVGVRIDQATLAA 231 >ref|YP_002910152.1| 50S ribosomal protein L1 [Burkholderia glumae BGR1] gb|ACR27448.1| 50S ribosomal protein L1 [Burkholderia glumae BGR1] Length = 232 Score = 270 bits (690), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 132/157 (84%), Positives = 144/157 (91%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFA G+KAE A+AAGA++VGMEDLAE++KAG M FDIVIASPDTMRIVGTLGQILGPR Sbjct: 75 VAVFAQGEKAEQARAAGAEIVGMEDLAEQIKAGQMDFDIVIASPDTMRIVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVTPDVATAVKNAKAGQVQYR DK+GIIHATIGR SF A L++NL ALI+ Sbjct: 135 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRVDKAGIIHATIGRASFESAALRSNLTALIE 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLAA 157 AL K+KPA+SKGVYLRKIALSSTMG GVRVDQ SLAA Sbjct: 195 ALQKSKPATSKGVYLRKIALSSTMGVGVRVDQTSLAA 231 >ref|ZP_00946356.1| LSU ribosomal protein L1P [Ralstonia solanacearum UW551] ref|YP_002260957.1| 50s ribosomal subunit protein l1 (rrna-binding translation regulation repressor rna-binding) [Ralstonia solanacearum IPO1609] gb|EAP71167.1| LSU ribosomal protein L1P [Ralstonia solanacearum UW551] emb|CAQ17675.1| 50s ribosomal subunit protein l1 (rrna-binding translation regulation repressor rna-binding) [Ralstonia solanacearum MolK2] emb|CAQ62898.1| 50s ribosomal subunit protein l1 (rrna-binding translation regulation repressor rna-binding) [Ralstonia solanacearum IPO1609] Length = 231 Score = 270 bits (690), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 132/156 (84%), Positives = 146/156 (93%) Query: 1 VAVFASGDKAEAAKAAGADVVGMEDLAERVKAGDMPFDIVIASPDTMRIVGTLGQILGPR 60 VAVFA G+KAE AKAAGA++VGMEDLAE+VKAG M FD+VIASPDTMR+VGTLGQILGPR Sbjct: 75 VAVFAQGEKAEQAKAAGAEIVGMEDLAEQVKAGKMDFDVVIASPDTMRVVGTLGQILGPR 134 Query: 61 GLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKSGIIHATIGRKSFSDADLKANLLALID 120 GLMPNPKVGTVTPDVATAVKNAKAGQVQ+R DK+GIIHATIGR+SF A LK+NL AL+D Sbjct: 135 GLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGIIHATIGRRSFEPAALKSNLAALLD 194 Query: 121 ALNKAKPASSKGVYLRKIALSSTMGAGVRVDQASLA 156 ALNKAKPASSKGVYLRKIA+SSTMG GVR+DQA+LA Sbjct: 195 ALNKAKPASSKGVYLRKIAVSSTMGVGVRIDQATLA 230