BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0020.p (108 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773535.1| 50s ribosomal protein L11 [Herbaspirillum se... 215 1e-54 ref|ZP_08274679.1| LSU ribosomal protein L11p (L12e) [Oxalobacte... 202 1e-50 gb|EGW62338.1| ribosomal protein L11 [Dechlorosoma suillum PS] 202 1e-50 ref|YP_003523382.1| ribosomal protein L11 [Sideroxydans lithotro... 200 5e-50 ref|YP_002890321.1| 50S ribosomal protein L11 [Thauera sp. MZ1T]... 199 8e-50 ref|YP_283537.1| 50S ribosomal protein L11 [Dechloromonas aromat... 199 1e-49 ref|YP_004751050.1| 50S ribosomal protein L11p (L12e) [Collimona... 199 1e-49 emb|CAQ17676.1| 50s ribosomal subunit protein l11 (methylation r... 199 2e-49 ref|YP_003751136.1| 50S ribosomal subunit protein L11, N-termina... 198 2e-49 ref|YP_003744362.1| 50S ribosomal protein L11 [Ralstonia solanac... 198 2e-49 >ref|YP_003773535.1| 50s ribosomal protein L11 [Herbaspirillum seropedicae SmR1] gb|ADJ61627.1| 50s ribosomal subunit L11 protein [Herbaspirillum seropedicae SmR1] Length = 143 Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 143 >ref|ZP_08274679.1| LSU ribosomal protein L11p (L12e) [Oxalobacteraceae bacterium IMCC9480] gb|EGF31850.1| LSU ribosomal protein L11p (L12e) [Oxalobacteraceae bacterium IMCC9480] Length = 143 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 100/108 (92%), Positives = 104/108 (96%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGI KGS KPHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGITKGSPKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVG ITRKQAEEIATQK+PDLTAAD++AAVR IAGSARSMGITVEG+ Sbjct: 96 DKVGSITRKQAEEIATQKRPDLTAADMDAAVRIIAGSARSMGITVEGM 143 >gb|EGW62338.1| ribosomal protein L11 [Dechlorosoma suillum PS] Length = 143 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 101/108 (93%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGS+KPHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSAKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR Q E+IA K PDLTAADLEAAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQCEDIAKAKSPDLTAADLEAAVRTIAGSARSMGITVEGL 143 >ref|YP_003523382.1| ribosomal protein L11 [Sideroxydans lithotrophicus ES-1] gb|ADE10995.1| ribosomal protein L11 [Sideroxydans lithotrophicus ES-1] Length = 144 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 98/108 (90%), Positives = 104/108 (96%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAG+QKGS PHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGVQKGSKTPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGK+TRKQAE+IA K+PDLTAADL+AAVRTIAGSARSMGITVEG+ Sbjct: 96 DKVGKLTRKQAEDIAKAKQPDLTAADLDAAVRTIAGSARSMGITVEGV 143 >ref|YP_002890321.1| 50S ribosomal protein L11 [Thauera sp. MZ1T] gb|ACR01944.1| ribosomal protein L11 [Thauera sp. MZ1T] Length = 143 Score = 199 bits (507), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 98/108 (90%), Positives = 104/108 (96%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNA+TQG+EPGLPIPVVITAFADKSFTF+MKTPPATILIKKAAGIQKGS+KPHT Sbjct: 36 MEFCKAFNAKTQGMEPGLPIPVVITAFADKSFTFIMKTPPATILIKKAAGIQKGSAKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR Q E+IA K+PDLTAADLEAAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQVEDIAKAKQPDLTAADLEAAVRTIAGSARSMGITVEGL 143 >ref|YP_283537.1| 50S ribosomal protein L11 [Dechloromonas aromatica RCB] sp|Q47JB4.1|RL11_DECAR RecName: Full=50S ribosomal protein L11 gb|AAZ45067.1| LSU ribosomal protein L11P [Dechloromonas aromatica RCB] Length = 143 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/108 (90%), Positives = 102/108 (94%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGI+ GS+KPHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIKSGSAKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR Q EEIA K PDLTAAD+EAA+RTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQCEEIAKTKSPDLTAADMEAAIRTIAGSARSMGITVEGL 143 >ref|YP_004751050.1| 50S ribosomal protein L11p (L12e) [Collimonas fungivorans Ter331] gb|AEK60227.1| LSU ribosomal protein L11p (L12e) [Collimonas fungivorans Ter331] Length = 143 Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/108 (92%), Positives = 101/108 (93%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGI KGS+ PHT Sbjct: 36 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGITKGSATPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 KVG ITRKQAEEIAT KKPDLT ADLEA VRTIAGSARSMGITVEGL Sbjct: 96 TKVGSITRKQAEEIATLKKPDLTGADLEAGVRTIAGSARSMGITVEGL 143 >emb|CAQ17676.1| 50s ribosomal subunit protein l11 (methylation rna-binding) [Ralstonia solanacearum MolK2] Length = 143 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/108 (89%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAG+QKGSSKPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGVQKGSSKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143 >ref|YP_003751136.1| 50S ribosomal subunit protein L11, N-terminal believed to regulate RelA [Ralstonia solanacearum PSI07] emb|CBJ49827.2| 50S ribosomal subunit protein L11, N-terminal believed to regulate RelA [Ralstonia solanacearum PSI07] emb|CCA81267.1| 50S ribosomal subunit protein L11, N-terminal believed to regulate RelA [blood disease bacterium R229] emb|CCA85403.1| 50S ribosomal subunit protein L11, N-terminal believed to regulate RelA [Ralstonia syzygii R24] Length = 143 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/108 (89%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAG+QKGSSKPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGVQKGSSKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143 >ref|YP_003744362.1| 50S ribosomal protein L11 [Ralstonia solanacearum CFBP2957] emb|CBJ41718.1| 50S ribosomal subunit protein L11, N-terminal believed to regulate RelA [Ralstonia solanacearum CFBP2957] Length = 143 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/108 (89%), Positives = 103/108 (95%) Query: 1 MEFCKAFNAQTQGVEPGLPIPVVITAFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHT 60 MEFCKAFNAQTQG+EPGLP+PVVITAFADKSFTFVMK+PPAT+LIKKAAG+QKGSSKPHT Sbjct: 36 MEFCKAFNAQTQGMEPGLPVPVVITAFADKSFTFVMKSPPATVLIKKAAGVQKGSSKPHT 95 Query: 61 DKVGKITRKQAEEIATQKKPDLTAADLEAAVRTIAGSARSMGITVEGL 108 DKVGKITR QAEEIA K DLTAADL+AAVRTIAGSARSMGITVEGL Sbjct: 96 DKVGKITRAQAEEIAKAKNADLTAADLDAAVRTIAGSARSMGITVEGL 143