BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0539.p (644 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004380268.1| hypothetical protein MDS_2485 [Pseudomonas m... 657 0.0 ref|YP_001348406.1| hypothetical protein PSPA7_3046 [Pseudomonas... 640 0.0 ref|ZP_01440812.1| hypothetical protein FP2506_00400 [Fulvimarin... 385 e-104 ref|ZP_00964763.1| hypothetical protein NAS141_04388 [Sulfitobac... 366 9e-99 ref|YP_457050.1| hypothetical protein ELI_00805 [Erythrobacter l... 283 8e-74 ref|ZP_07327160.1| conserved hypothetical protein [Acetivibrio c... 99 3e-18 ref|YP_950395.1| hypothetical protein AAur_pTC20249 [Arthrobacte... 97 7e-18 ref|YP_833106.1| hypothetical protein Arth_3631 [Arthrobacter sp... 87 6e-15 ref|YP_004350992.1| hypothetical protein bgla_2p0740 [Burkholder... 78 6e-12 >ref|YP_004380268.1| hypothetical protein MDS_2485 [Pseudomonas mendocina NK-01] gb|AEB58516.1| hypothetical protein MDS_2485 [Pseudomonas mendocina NK-01] Length = 631 Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/646 (51%), Positives = 446/646 (69%), Gaps = 21/646 (3%) Query: 1 MDNPFEKRASESILGPRSLLPLVSPGPMDYFYSPQRKALFEKLTIWIGSPGCGKTTLART 60 MDNPF+KRA+E + P +LLPLVS P+ F++ L EKL+I +G+PGCGKTT+AR Sbjct: 1 MDNPFKKRATEYVAEPNTLLPLVSHAPLVEFFTQDGTELLEKLSIVVGTPGCGKTTIARI 60 Query: 61 LELDSLLVLGTSPT-VNKELAMFLADIGVLEDGAPSLLTHRIPMTTNFRSIWELPYSTDL 119 +E DSL L P +NKELA+ LA + +L DGAPSLL +R+PMTTNFRSIW+LPYS + Sbjct: 61 IEFDSLATLARDPVEINKELAIALAQLKILRDGAPSLLAYRLPMTTNFRSIWDLPYSDSI 120 Query: 120 REDLLRAFVQSKSVLGWMRQLERAE-IDLDDVEIVLREDAESARAVMRTGNAREFRDYAR 178 R LLRA+VQSK+VLGW RQLE E IDL+ + IV R D+ESAR V++ + REFR++AR Sbjct: 121 RATLLRAYVQSKAVLGWFRQLESVEEIDLEQIVIVTRSDSESARKVLKADSPREFREHAR 180 Query: 179 TIELGVFKIVTALVPPSEEVFTQQMLNSRYDVFEEIIGIKIKRWPEGQWKESI-LKPMVV 237 IEL VFK++TALV PSE+ + ++N YDVFE I +IK W G+ E + L PM + Sbjct: 181 RIELAVFKVITALVAPSEQDLAE-IINETYDVFEYIELFRIKGWLTGKSDEYVDLLPMAI 239 Query: 238 IDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDIVAPEDYRDAVVRDSPDGENLTPGS 297 +DDAHELHP Q+ LRDWLK R I I RW+MCR D+V+PEDYRDA+ +D + PG+ Sbjct: 240 VDDAHELHPLQFAQLRDWLKRRNIKIGRWVMCRPDVVSPEDYRDAMAKDVIEEGEHRPGT 299 Query: 298 KHGRDYYVKLMQTTGARIRQFRKMSSDIADRYFARLPSFAENSVKSLAQALLVNTPKLSA 357 GRDY +KLMQ + R ++F ++ DI+ RY + + + SVK+L+ L N+ L+A Sbjct: 300 TGGRDYILKLMQPSH-RNKRFIGVARDISTRYLSGINDLSRRSVKTLSSVLDHNSVTLTA 358 Query: 358 SHLSELKKEIDKLAGNPHIAPGRLAALKSRVPISLPEDEQLAILRILLHREINNSPQLTL 417 S L +L+K +D L ++ +++L++RVP P DE LA RILL RE N +PQL L Sbjct: 359 SQLEQLRKSVDSLQRESKLSESVISSLRARVPEKTPPDEALAAFRILLKREWNRTPQLGL 418 Query: 418 LDMEPQVVQVEEREIDDDDPSGEAIEKGK-VRASVAEGARIQLMHQYKRPFYFGLDKLSD 476 LD D+P+ E I + V S+ EGAR+QL H++ RP+YFG+DKL+D Sbjct: 419 LD---------------DEPAEEPITGDRTVSPSLLEGARLQLFHEFGRPYYFGMDKLAD 463 Query: 477 ASDTNIEQFISLTGPLVSELMTKIIRRKSADLTPLAQHLSLQKTAQDTMNEWDFPYRDNV 536 AS+ NIEQFI L+G L+ EL+ +++R K +L+ QH +L+K + M+EWDFPY V Sbjct: 464 ASNNNIEQFIRLSGSLIDELIMRVVRNKKPELSAKLQHDALRKLSTKIMDEWDFPYHALV 523 Query: 537 QVLVNWIADRCLERTMLGHAPLDDGANAFGVLQEEMDAVLNNSGRMARILHFAFAYKALV 596 + L++ +A RC+ERT+L +APLD GANA G+ QEEMD VL S R+ R+LHFAFAYKALV Sbjct: 524 KDLIHGMASRCVERTLLPNAPLDHGANAIGIPQEEMDKVLARSERLTRVLHFAFAYKALV 583 Query: 597 MVPHYNCKKKRWCLLELGGIPILAKGLTLSRGGFVEGKISDLDSLI 642 VP Y CK + WCLLE+G IP +A GLTL RGGF+E +S L SL+ Sbjct: 584 FVPQYKCKGRVWCLLEIGAIPSIAYGLTLRRGGFIEDTLSGLQSLL 629 >ref|YP_001348406.1| hypothetical protein PSPA7_3046 [Pseudomonas aeruginosa PA7] gb|ABR82055.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 631 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/646 (50%), Positives = 436/646 (67%), Gaps = 21/646 (3%) Query: 1 MDNPFEKRASESILGPRSLLPLVSPGPMDYFYSPQRKALFEKLTIWIGSPGCGKTTLART 60 MDNPF+KRA+E + P +LLPLVS P+ F+SP L EKL+I +G+PGCGKTT+AR Sbjct: 1 MDNPFKKRATEYVADPSTLLPLVSHTPIQEFFSPDGGELLEKLSIVVGTPGCGKTTIARV 60 Query: 61 LELDSLLVLGTSPT-VNKELAMFLADIGVLEDGAPSLLTHRIPMTTNFRSIWELPYSTDL 119 +E +SL L P +NKELA L + +LED PSLL +R+PMTTNFRSIW+LPY L Sbjct: 61 IEFESLATLARDPVEINKELATTLTHLRILEDSTPSLLAYRLPMTTNFRSIWDLPYPESL 120 Query: 120 REDLLRAFVQSKSVLGWMRQLERAE-IDLDDVEIVLREDAESARAVMRTGNAREFRDYAR 178 R LLRA+VQSK+VLGW RQLE E IDL+ +EI+ R D+ESAR V+R FR+ AR Sbjct: 121 RATLLRAYVQSKAVLGWFRQLESIESIDLEQIEIITRSDSESAREVLRADTPSAFREKAR 180 Query: 179 TIELGVFKIVTALVPPSEEVFTQQMLNSRYDVFEEIIGIKIKRW-PEGQWKESILKPMVV 237 +EL VFK++TALV PSE + ++N++YDVFE I I++K W + L+PM + Sbjct: 181 QVELAVFKVITALVAPSERDLAE-VINTKYDVFEYIERIRVKNWVSSSNLVYAELRPMAI 239 Query: 238 IDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDIVAPEDYRDAVVRDSPDGENLTPGS 297 +DDAHELHP Q+ LRDWLKSR I + RW+MCR D+V+PEDYR+A+ +D + E G+ Sbjct: 240 VDDAHELHPLQFAQLRDWLKSRNIRVGRWVMCRPDVVSPEDYREAMAKDVLEEEQ-RHGT 298 Query: 298 KHGRDYYVKLMQTTGARIRQFRKMSSDIADRYFARLPSFAENSVKSLAQALLVNTPKLSA 357 GRDY +KLMQ + R+F+ ++ DI+ RY + + SV+SL L + L+ Sbjct: 299 ARGRDYILKLMQPSHRNTRRFQVVARDISARYLHGITELSRRSVRSLGGVLDHDHVVLAP 358 Query: 358 SHLSELKKEIDKLAGNPHIAPGRLAALKSRVPISLPEDEQLAILRILLHREINNSPQLTL 417 + L +L+ ++ A ++ L +L+SR+P +LP DE A RILL RE N SPQL L Sbjct: 359 AQLEQLRNSVETFARESKLSDAVLHSLRSRIPATLPTDEATAAFRILLRREWNRSPQLGL 418 Query: 418 LDMEPQVVQVEEREIDDDDPSGEAIEKGK-VRASVAEGARIQLMHQYKRPFYFGLDKLSD 476 LD DDP+ E + + V +++ EGAR+QL H++ RP+YFG+DKL++ Sbjct: 419 LD---------------DDPAEEPVTGDRPVSSALLEGARLQLFHEFGRPYYFGMDKLAE 463 Query: 477 ASDTNIEQFISLTGPLVSELMTKIIRRKSADLTPLAQHLSLQKTAQDTMNEWDFPYRDNV 536 AS+ NIEQFI L+G L+ EL+ +++R K+ +L+ QH L+K A M EWDFPY V Sbjct: 464 ASNNNIEQFIRLSGVLIDELIARVVRGKTPELSAKLQHDVLRKLAARIMEEWDFPYHALV 523 Query: 537 QVLVNWIADRCLERTMLGHAPLDDGANAFGVLQEEMDAVLNNSGRMARILHFAFAYKALV 596 + +++ +A RCLERT+L +APLD GANA G+ QEEMD VL S R+ R+LH+AFAYKALV Sbjct: 524 KDVISGMAQRCLERTLLPNAPLDHGANAIGIPQEEMDQVLARSERLTRVLHYAFAYKALV 583 Query: 597 MVPHYNCKKKRWCLLELGGIPILAKGLTLSRGGFVEGKISDLDSLI 642 VP Y CK + WCLLELG IP +A GLTL RGGF+E +S L SL+ Sbjct: 584 FVPQYRCKGRVWCLLELGAIPSIAYGLTLRRGGFIEDTLSGLQSLL 629 >ref|ZP_01440812.1| hypothetical protein FP2506_00400 [Fulvimarina pelagi HTCC2506] gb|EAU39828.1| hypothetical protein FP2506_00400 [Fulvimarina pelagi HTCC2506] Length = 635 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 232/659 (35%), Positives = 356/659 (54%), Gaps = 40/659 (6%) Query: 1 MDNPFEKRASESILGPRSLLPLVSPGPMDYFYS--PQRKALFEKLTIWIGSPGCGKTTLA 58 M NPFEKRA+E + + L +V+P P+ F+ + + L+++L + IG+PG GKTTLA Sbjct: 1 MANPFEKRATEYLRDDEAFLAVVTPEPLATFFQKPAKEERLYDRLAMIIGTPGSGKTTLA 60 Query: 59 RTLELDSL--LVLGTSPTVNKELAMFLADIGVLEDGAPSLLTHRIPMTTNFRSIWELPYS 116 R + +L L+ T K L L G + D P+L+ R+P+ +R WE PY Sbjct: 61 RLFQYTTLRTLLRNRGMTSYKPLIDTLTACGAIVDERPTLVGGRLPLEAEYREFWEFPYP 120 Query: 117 TDLREDLLRAFVQSKSVLGWMRQLERAEIDLDDVEIVLREDAESARAVMRTGNAREFRDY 176 DL+ L+ A +Q+++VL W+R ++ + + L+ VEIV R DA++A + Sbjct: 121 NDLKTGLMIALLQARTVLAWLRNIQASGVPLERVEIVPRSDADAALTAIGGTAGPALLVR 180 Query: 177 ARTIELGVFKIVTALVPPSEEVFTQQMLNSRYDVFEEIIGIKIKRWPEGQWKESI-LKPM 235 AR +E +++I ALVPP E ++ + Y F+ I +I +E + L+P+ Sbjct: 181 AREVEFAIYQISAALVPPDVEDIDREA-AAVYRPFDVIEAFRI-----ADGEEVLELRPL 234 Query: 236 VVIDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDIVAPEDYRDAVVRDSPDGENLTP 295 V+ DDAH LHP Q LR WL R + ++RW++ RLD + P D ++ + D E P Sbjct: 235 VIFDDAHSLHPTQLAALRRWLARRELKVARWVLTRLDALTPGD---VLLDRAADTEE--P 289 Query: 296 GSKHGR---DYYVKLMQTTGARIRQFRKMSSDIADRYFARLPSFAENSVKSLAQALLVNT 352 G K R D +++ + G + R FRKM+ D+A RY +++ F + SL L ++ Sbjct: 290 GLKQAREITDIWMQSGEERGNQRRAFRKMAKDMAGRYLSQMEVFNRRRLHSLGDLLSTSS 349 Query: 353 PKLSASHLSELKKEIDKLAGNPHIAPGRLAALKSRVPISLP------EDEQLAILRILLH 406 ++ ++L + +D L ++ R +L+ V L +D +L +L +LL Sbjct: 350 EVVALGKRAKLAEHVDALQRRYGVSAERRRSLEKEVDNYLATAEENGDDLRLGMLEVLLE 409 Query: 407 REINNSPQLTLLDMEPQVVQVEEREIDDDDPSGEAIEKGKVRASVAEGARIQLMHQYKRP 466 R PQ L D D D E A VA+GARI L+H+Y RP Sbjct: 410 RYAKRIPQRGLFD--------------DADDDAEPSRPLTADAGVADGARIHLLHRYDRP 455 Query: 467 FYFGLDKLSDASDTNIEQFISLTGPLVSELMTKIIRR-KSADLTPLAQHLSLQKTAQDTM 525 ++FG+D L DAS N EQF+ L LV + T++IRR K A L Q+ L++ A + + Sbjct: 456 YFFGIDTLCDASSENAEQFLQLAARLVLQSETQLIRRGKDAMLASGVQNKLLRERASEMV 515 Query: 526 NEWDFPYRDNVQVLVNWIADRCLERTMLGHAPLDDGANAFGVLQEEMDAVLNNSGRMARI 585 EWDFP V+ L + +A CL +++ G+A L GA AFG+LQEE DA+ +AR+ Sbjct: 516 REWDFPQFQLVRRLADGLAAECLAKSLEGNASLGGGATAFGILQEEFDAIPETHPHLARV 575 Query: 586 LHFAFAYKALVMVPHYNCKKKRWCLLELGGIPILAKGLTLSRGGFVEGKISDLDSLIAH 644 L F AY A V+VP++ KK+ WC +ELGG+ +L GLTL RGGF+E + DL L+ Sbjct: 576 LKFGVAYNAFVLVPNHGTKKRLWCKIELGGVLLLHHGLTLRRGGFLERRTDDLVRLLGE 634 >ref|ZP_00964763.1| hypothetical protein NAS141_04388 [Sulfitobacter sp. NAS-14.1] gb|EAP78624.1| hypothetical protein NAS141_04388 [Sulfitobacter sp. NAS-14.1] Length = 637 Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 229/657 (34%), Positives = 350/657 (53%), Gaps = 38/657 (5%) Query: 1 MDNPFEKRASESILGPRSLLPLVSPGPMDYFYSPQRK--ALFEKLTIWIGSPGCGKTTLA 58 M NPFEKRASE + LPLV+P P+ F+ L+++L++ IG+PG GKTT+A Sbjct: 1 MANPFEKRASEYRRDDEAFLPLVTPDPLITFFKKHADDGKLYDQLSVIIGAPGSGKTTIA 60 Query: 59 RTLELDSL--LVLGTSPTVNKELAMFLADIGVLEDGAPSLLTHRIPMTTNFRSIWELPYS 116 R + +L L+ S K L L G ++D P LL R+P+ + +R WE PY Sbjct: 61 RLYQYSTLKTLLRHESQINFKPLVDTLTQCGAIKDRQPILLGGRVPLESEYRDFWEFPYP 120 Query: 117 TDLREDLLRAFVQSKSVLGWMRQLERAEIDLDDVEIVLREDAESARAVMRTGNAREFRDY 176 DL+ L+ A +QS+++L W+ L ++LD + IV R DA +A A + R+ Sbjct: 121 DDLKCKLMFALIQSRTILSWISNLTNTGVELDQISIVPRGDAVAALAAIGGIGGRDLFHK 180 Query: 177 ARTIELGVFKIVTALVPPSEEVFTQQMLNSRYDVFEEIIGIKIKRWPEGQWKESILKPMV 236 AR IE ++ I AL+PP+ + + Y F+ I +I +G K +L+P+V Sbjct: 181 ARAIEEQIYSISAALLPPAIGDIDDEAAAA-YHPFDVIEHFEIT--VDGNTK--VLRPLV 235 Query: 237 VIDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDIVAPEDYRDAVVRDSPDGENLTPG 296 + DDAH LHP Q+ R+WL R + ISRW++ R+D ++PED V+ +G PG Sbjct: 236 IFDDAHNLHPEQFTAFREWLARRELKISRWVLTRMDALSPED----VLLAQSEGNTTRPG 291 Query: 297 SKHGRDYYVKLMQTTGARI---RQFRKMSSDIADRYFARLPSFAENSVKSLAQALLVNTP 353 K R+ V MQ+ R + FRKM+ +A RY ++ F+ + LA + Sbjct: 292 LKDARELNVIWMQSQDDRFGKRKAFRKMAKGMATRYLRQMDVFSRRGISDLADFIGTQPD 351 Query: 354 KLSASHLSELKKEIDKLAGNPHIAPGRLAALKSRVPISLP------EDEQLAILRILLHR 407 +S S L L ID + I+ R L++++ L +D LAIL IL HR Sbjct: 352 MISPSKLETLAGSIDTIQQKNGISDKRRKTLEAQISEYLSGTGHESKDVALAILSILFHR 411 Query: 408 EINNSPQLTLLDMEPQVVQVEEREIDDDDPSGEAIEKGKVRASVAEGARIQLMHQYKRPF 467 +N PQ L D + DD +P+ V +A+GA+++L+H + RP+ Sbjct: 412 YLNRVPQKGLFDDQE----------DDVEPNRPLT----VDGGIADGAKVRLLHDFDRPY 457 Query: 468 YFGLDKLSDASDTNIEQFISLTGPLVSELMTKIIRRKSADLTPLAQHLSLQKTAQDTMNE 527 Y+ +D L DAS N EQF+ L LV++ T++IR K A L+ Q+ L+K A + Sbjct: 458 YYNIDALCDASSENAEQFLHLASTLVTQAETQLIREKPASLSSRDQNRLLRKKAGEIYRG 517 Query: 528 WDFPYRDNVQVLVNWIADRCLERTM--LGHAPLDDGANAFGVLQEEMDAVLNNSGRMARI 585 WDFP+ V++L IA +C+ +++ GA AFG+LQEE D + +AR+ Sbjct: 518 WDFPHNREVKLLAEGIAKQCVAKSLEGNASLGGGAGAGAFGILQEEFDQIPKKYEELARV 577 Query: 586 LHFAFAYKALVMVPHYNCKKKRWCLLELGGIPILAKGLTLSRGGFVEGKISDLDSLI 642 L F AY A V+V +++ K + WC +EL G+ + GL+ +RGGF+E K DL SL+ Sbjct: 578 LKFGAAYNAFVLVQNHSTKNRMWCQIELCGVLRVHFGLSQTRGGFLERKTDDLLSLL 634 >ref|YP_457050.1| hypothetical protein ELI_00805 [Erythrobacter litoralis HTCC2594] gb|ABC62253.1| hypothetical protein ELI_00805 [Erythrobacter litoralis HTCC2594] Length = 639 Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 214/657 (32%), Positives = 312/657 (47%), Gaps = 46/657 (7%) Query: 1 MDNPFEKRASESILGPRSLLPLVSPGPMDYFY--SPQRKALFEKLTIWIGSPGCGKTTLA 58 M NPF +RA+E + S L +VSP P+ F S + +FE IGSPG GKT LA Sbjct: 1 MANPFLRRATEYVRDDASFLSIVSPTPLTTFLAKSQHKDDVFEVPVRIIGSPGSGKTMLA 60 Query: 59 RTLE---LDSLLVLGTSPTVNKELAMFLADIGVLEDGAPSLLTHRIPMTTNFRSIWELPY 115 E ++++L ++PT N+ LA LA G LE P + R+PM + +R WELPY Sbjct: 61 TLAEFKMVEAILKDLSNPT-NRTLAAALAKAGFLESEVPRVAAVRVPMESEYREFWELPY 119 Query: 116 STDLREDLLRAFVQSKSVLGWMRQLERAEI-DLDDVEIVLREDAESARAVMRTGNAREFR 174 +R L VQ++++LG +R L LD + V R D E+ + A R Sbjct: 120 EPAVRTKLAFWLVQARAMLGLIRNLTANRTRGLDGIRFVPRADYEAHLEQIGGLTAEGVR 179 Query: 175 DYARTIELGVFKIVTALVPPSEEVFTQQMLNSRYDVFEEIIGIKIKRWPEGQWKESILKP 234 D A ++ ++ I L PP + + Y F+ I + I W + KE + P Sbjct: 180 DRALAVQRAIYSIGAGLRPPKLADLPEDA-TAPYAPFDAIQRVSID-W---RGKEIDVSP 234 Query: 235 MVVIDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDIVAPEDYRDAVVRDSPDGENLT 294 +V++DD H LH +Q + + L R + RW+M RLD ++P AV+R SP G + Sbjct: 235 LVMLDDVHALHHDQLEAMFETLSHREMRFGRWMMMRLDALSP----GAVLR-SP-GAQPS 288 Query: 295 PGSKHGRDYYVKLMQTT-----GARIRQFRKMSSDIADRYFARLPSFAENSVKSLAQALL 349 G GRD+ MQ GA QFR M+ D+A RY + + + + L Sbjct: 289 HGRTTGRDFVDIRMQVNEEGKKGAARSQFRTMAKDMAKRYLPLVETLRNRGATDIERLLP 348 Query: 350 VNTPKLSASHLSELKKEIDKLAGNPHIAPGRLAALKSRVPISLPEDEQ--------LAIL 401 P +SA L +++D+ ++ R A + V L LA++ Sbjct: 349 SEPPTVSAGQLRTFAEKVDREQSKLGVSSVRRAEIDQLVADFLGRSASYDNGPEVALAMV 408 Query: 402 RILLHREINNSPQLTLLDMEPQVVQVEEREIDDDDPSGEAIEKGKVRASVAEGARIQLMH 461 RIL+HR + + P + EE + D P K A VA GAR+ L H Sbjct: 409 RILMHRY-----AVRIARAAPSLF--EEFDPDPKTPL-------KADADVAHGARLHLHH 454 Query: 462 QYKRPFYFGLDKLSDASDTNIEQFISLTGPLVSELMTKIIRRKSADLTPLAQHLSLQKTA 521 + RPF+FG+D + DAS+ N E F+ G LV+ + T+ IR + L Q L A Sbjct: 455 ELGRPFHFGIDDICDASNENAEVFLQYAGELVANIETRAIRNEELPLPSRVQQKVLSGKA 514 Query: 522 QDTMNEWDFPYRDNVQVLVNWIADRCLERTMLGHAPLDDGANAFGVLQEEMDAVLNNSGR 581 + M W FP V+ LV+ IA CL + L +APL GANA +L+EEM L Sbjct: 515 RKIMEGWAFPQATRVRSLVDTIAKDCLAESQLPNAPLGAGANAVAILEEEMQ-TLPLDDE 573 Query: 582 MARILHFAFAYKALVMVPHYNCKKKRWCLLELGGIPILAKGLTLSRGGFVEGKISDL 638 + +L A A A+ + Y K W L+EL G L GLT +RGGF+ ++ L Sbjct: 574 LGAVLKHAIANGAITIEREYGQGGKLWALIELTGTVSLVHGLTYNRGGFLPKRVGYL 630 >ref|ZP_07327160.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2] gb|EFL61615.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2] Length = 654 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 157/687 (22%), Positives = 276/687 (40%), Gaps = 109/687 (15%) Query: 3 NPFEKRASESILGPRSLLPLVSPGPMDYFYSPQRKALFEKLTIWIGSPGCGKTTLARTLE 62 NPF + SESI L L P +D ++ ++ + SPG GKTTL Sbjct: 6 NPFFMKYSESIDSGDLFLRLFEPEVLDIL---NKEKIWNSIQTIRSSPGGGKTTLFNVFT 62 Query: 63 ---LDSLLVLGTSPTVNKELAMFLADIGVLEDGAPSLLTHRIPMTTNFRSIWELPYSTDL 119 L++L L + N E + +IG + + P +L I N+ ++ + Sbjct: 63 PNVLNTLYRLRKTEEYN-ECFRKMKNIGAISETGPDVLGVIISCARNYVIFDDIIPDENY 121 Query: 120 REDLLRAFVQSKSVLGWMRQ-LERAEI----DLDDVEIV-LREDAESARAVMR--TGNAR 171 L + +L MR LE + D++ ++++ + ++ +V T R Sbjct: 122 SIALFFTLFNVRIILALMRSALELKGLNFPADIERIKVIGIPDEFHHMMSVSENSTIGGR 181 Query: 172 EFRDYARTIELGVFKIVTAL-VPPSEEVFTQQMLNSRYDVFE---EIIGIKIKRWPEGQW 227 E ++A E + K++ + VP +++ + + Y + + + + +R + Sbjct: 182 ELYNWACENEKNICKLIDSFDVPNKHDMYGRNLQLLLYSLLLFNPQNLLVDNQRVAD--- 238 Query: 228 KESILKPMVVIDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDIVAPEDYRDAVVRDS 287 K +++ DD H+L Q L L S WI RL+++ +D+ Sbjct: 239 -----KILIMFDDVHKLSYRQRHSLLSQLFQFRPKTSVWIAERLEVLGMQDFF------- 286 Query: 288 PDGENLTPGSKHGRDYYVKLMQTTGARI-RQFRKMSSDIADRYF-----ARLPSFA---- 337 G + T G ++ Y ++T + I ++F K+ IADR +R+ SF+ Sbjct: 287 --GSDGTVGREYDPPIY---LETYASSIGKKFEKILISIADRRVRLSNSSRIASFSDCLK 341 Query: 338 --------------ENSVKSLAQALLVNTPKLSASHLSELKKEIDKLAGNPHIAPGRLAA 383 ENSVK + +L T + S E E +K G+P R A Sbjct: 342 NELLFSDIKLAEVYENSVKIVKNRILEKTK--NNSDYKEWISEREKFDGSP-----REKA 394 Query: 384 LKSRVPISLPEDEQLAILRILLHREINNSPQLTLLDMEPQVVQVEEREIDDDDPSGEAIE 443 L + L I+++R++NN+ L + ++EERE Sbjct: 395 LSWKT------------LEIIINRDLNNAQMKLDLGIPYSYDELEEREYKS--------- 433 Query: 444 KGKVRASVAEGARIQLMHQYKRPFYFGLDKLSDASDTNIEQFISLTGPLVSELMTKIIRR 503 +++ E A L ++ P+YFG+D+L+ S NIEQF+ G L E ++ + R Sbjct: 434 -----SNIKEAAEFYLAVEFGLPYYFGIDELTSLSSHNIEQFLYFAGELFEESISAELIR 488 Query: 504 KSADLTPLAQHLSLQKTAQDTMNEWD--FPYRDNVQVLVNWIADRCLERTMLGHAPLDDG 561 K LTP Q L++++ NE PY NV + + + L+ G A Sbjct: 489 KDYALTPERQEKILKRSSSVRWNELSRRVPYGSNVVCFLENVCNYALKDLQKGTASYPSA 548 Query: 562 ANAFGVLQEEM------DAVLNNSGR----MARILHFAFAYKALVMVPHYNCKKKRWCLL 611 G+ M D+ N + +A +L Y L M + K+W +L Sbjct: 549 GTITGIAISVMNKDDLIDSYNNPKNKAYSLLANVLSSCLTYNLLEM-KDISQGGKKWTVL 607 Query: 612 ELGGIPILAKGLTLSRGGFVEGKISDL 638 L L GL L +GG+ +++L Sbjct: 608 YLNRWICLHFGLPLKQGGWKSKTLNEL 634 >ref|YP_950395.1| hypothetical protein AAur_pTC20249 [Arthrobacter aurescens TC1] gb|ABM10742.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length = 682 Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 176/700 (25%), Positives = 295/700 (42%), Gaps = 113/700 (16%) Query: 1 MDNPFEKRASESILGPRSLLPLVSPGPMDYFYSPQRKALFEKLTIWIGSPGCGKTTLART 60 + NPF R +E + S G ++ P + +L + +PG GKT++ R Sbjct: 3 VGNPFRLRFTEQQRDHSGFIRTFSVGMLEVL--PSADIAWNRLVVIRSAPGAGKTSILRL 60 Query: 61 LELDSLL-VLGTSPTVN--KELAMFLADIGVLEDGAPSLLTHRIPMTTNFRSIWEL-PYS 116 L +SL ++G + K L L D+GVL + +L + + ++RS+ +L P Sbjct: 61 LTPESLTTIIGIDDADDGIKALRNALEDLGVLSNRELRILGILVSVGKDYRSLIDLGPRE 120 Query: 117 TDLRE---DLLRAFVQSKSVLGWMRQLE-RAEIDLDDVEIVLRE--DAESAR-AVMRTGN 169 + ++ LL A + ++++ R D ++ + RE + E+AR A+++ G Sbjct: 121 SGNQKIFFKLLDARILARAIEAIATACGLRFPQDAKRIQFLPREGSEGEAARDALVQIGA 180 Query: 170 AREFRDYA----------------RTIELGVFKIVTALVPPSEEVFTQQMLNSRYDVFEE 213 + Y+ R+ E V ++ +L+P E ++ +SR Sbjct: 181 GFQDSSYSSADGNAVDGSSLLGLVRSKERSVLTLLDSLLPVEWE---SEVGHSRLYALPF 237 Query: 214 IIGIKIKRWPEGQWKESILKPMVVIDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDI 273 + + I +GQ E +P+V+ DD HEL Q L L R + RWI R + Sbjct: 238 LGNVDIA--VDGQLLE--YRPVVLFDDVHELEAVQRESLYSQLLDRSNNLGRWIAERKEA 293 Query: 274 VAPEDYRDAVVRDSPDGENLTPGSKHGRDYYVKLMQ------TTGARIRQFRKMSSDIAD 327 V PD E LT G+ GRDY + ++ + G + ++ S IAD Sbjct: 294 V-------------PDQELLT-GNTDGRDYQMVALEDELTAGSKGGHSPRLSRILSGIAD 339 Query: 328 -RYFARLPSFAENS-----VKSLAQALLVNTPKLSASHLSELKKEIDKLAGNPHIAPGRL 381 R RL S + + S QA ++ S + L+K +D GNP G L Sbjct: 340 SRAQVRLASLGVHETFTSLLGSSEQAPTDRKSEVLDSVTANLQKLVD---GNPQY-KGWL 395 Query: 382 AALKSRV----PISLPEDEQLAILRILLHREINNSPQLTLLDMEPQVVQVEEREIDDDDP 437 AA + R P+ +D + L+IL+ R++ S Q L + E + Q Sbjct: 396 AAAEMRNGGLDPLEAAQDYR--ELQILIERDLKRS-QPALFEYEIETEQAT--------- 443 Query: 438 SGEAIEKGKVRASVAEGA-RIQLMHQYKRPFYFGLDKLSDASDTNIEQFISLTGPLVSEL 496 K+ +S + A ++ L +++ P+Y G + L+D S N+EQ++ L G + +L Sbjct: 444 --------KMSSSGTKAASKLFLAVEHRLPYYAGYEVLADLSSRNVEQYLGLGGDMF-DL 494 Query: 497 MTKII---RRKSADLTPLAQHLSLQKTAQDTMNEWDFPYRD-----NVQVLVNWIADRCL 548 MT + RR A L+ Q ++++++ W+ R +V L++ IAD Sbjct: 495 MTSAVTQRRRTGARLSAEEQDHRVRRSSKQL---WEAVVRRVAHGPDVLALLHTIADNSR 551 Query: 549 ERTMLGHAPLDDGANAFGV-LQEEMDAVLNNSG--------RMARILHFAFAYKALVMVP 599 T AP G + L E N G R++R L A A L M Sbjct: 552 LETFRPTAPYAPGVTGTAIALHERRFLFYRNDGRGRDARYERLSRALSSAVANNLLEMSA 611 Query: 600 H-YNCKKKRWCLLELGGIPILAKGLTLSRGGFVEGKISDL 638 N K ++W +L L + L L RGGF E I+ L Sbjct: 612 EATNAKGQKWSVLYLNRLLCPHFDLPLQRGGFREQPITKL 651 >ref|YP_833106.1| hypothetical protein Arth_3631 [Arthrobacter sp. FB24] gb|ABK05006.1| hypothetical protein Arth_3631 [Arthrobacter sp. FB24] Length = 682 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 166/701 (23%), Positives = 285/701 (40%), Gaps = 115/701 (16%) Query: 1 MDNPFEKRASESILGPRSLLPLVSPGPMDYFYSPQRKALFEKLTIWIGSPGCGKTTLART 60 + NPF R +E S + S G ++ P ++ + +L + +PG GKT++ R Sbjct: 3 VGNPFRLRFTEQQRDHISFIRTFSVGMLEVL--PPAESAWNRLVVLRSAPGAGKTSILRL 60 Query: 61 L---ELDSLLVLGTSPTVNKELAMFLADIGVLEDGAPSLLTHRIPMTTNFRSIWELPYST 117 L L+++ + + L L D+ V+ +G +L + + ++RS+ +L S Sbjct: 61 LTPESLNAITRIDNPDDAIRALRRALEDLDVIGNGKLRILGVLVSVGKDYRSLIDLGPSG 120 Query: 118 DLRED----LLRAFVQSKSVLGWMRQLE-RAEIDLDDVEIVLRE--DAESARAVMRTGNA 170 + LL A + +++V M R +D + ++ RE + ESAR + + Sbjct: 121 IGNQKIFFKLLDARIIARAVEAVMSASGLRFPLDAKRLRLIPREGSEGESAREALAQIDD 180 Query: 171 REFRDYARTIE----------LGVFK-------IVTALVPPSEEVFTQQMLNSRYDVFEE 213 ++D A + LG+ + + + P E + + +SR Sbjct: 181 -SYKDSALSARDSDGIDGETLLGIVRNKERSVLSLLDSLLPVE--WESETGHSRLYALPL 237 Query: 214 IIGIKIKRWPEGQWKESILKPMVVIDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDI 273 + +KI E + +P+V+ DD HEL Q L L R + RWI R D Sbjct: 238 LGNVKI----EIDGRVVDYRPVVLFDDVHELEVAQREALYTQLLDRANNLGRWIAERKDA 293 Query: 274 VAPEDYRDAVVRDSPDGENLTPGSKHGRDYYVKLMQ---TTGARIRQFRKMS---SDIAD 327 V PD E LT G+ GRDY + ++ T GA+ ++ IAD Sbjct: 294 V-------------PDHELLT-GTTDGRDYQMVALEDELTAGAKGGHSTRLGRILGGIAD 339 Query: 328 -RYFARLPSFAENSVKSLAQALLVNTPKLSASHLSELKKEIDK-----LAGNPHIA---- 377 R RL S ++ LL ++ A E+ + +A NP A Sbjct: 340 SRAQVRLASL---NIHEPFTTLLSTAEQIPAGRRKEVFDAVAAELRTLVAANPRYAGWLS 396 Query: 378 --PGRLAALKSRVPISLPEDEQLAILRILLHREINNSPQLTLLDMEPQVVQVEEREIDDD 435 GR A + R+ +L E L+IL+ R++ S +P + + E Sbjct: 397 AAEGRQAGV-DRLEAALDWRE----LQILIERDVRRS--------QPALFEYEI------ 437 Query: 436 DPSGEAIEKGKVRASVAEGA-RIQLMHQYKRPFYFGLDKLSDASDTNIEQFISLTGPLVS 494 EA + ++ +S +GA R+ L ++ P+Y G + L+D S N+EQ++SL G + Sbjct: 438 ----EAGQATRMSSSSTKGAARLFLATEFNLPYYTGHETLADLSSRNVEQYLSLGGDMF- 492 Query: 495 ELMTKII--RRKSADLTPLAQHLSLQKTAQDTMNEWDFPYR-----DNVQVLVNWIADRC 547 +LMT + RR++ A+ Q+ + + W+ R +V L++ +AD Sbjct: 493 DLMTSAVAQRRRTGPYLSAAEQ--DQRVRRSSKQLWEAVVRRVAHGQDVLALLHTVADHS 550 Query: 548 LERTMLGHAPLDDGANAFGVLQEEMDAVLNNSG---------RMARILHFAFAYKALVMV 598 T AP G + E + R++R L A A L M Sbjct: 551 RLETYRSTAPYAPGVTGTAIAMHERSFLFGRKDGRGPDARYERLSRALSSAVANNLLEMS 610 Query: 599 PH-YNCKKKRWCLLELGGIPILAKGLTLSRGGFVEGKISDL 638 + K ++W + L + L L RGGF E I+ L Sbjct: 611 SEGTSAKGQKWSVFYLNRLLCPHFDLPLQRGGFREQSITKL 651 >ref|YP_004350992.1| hypothetical protein bgla_2p0740 [Burkholderia gladioli BSR3] gb|AEA65669.1| hypothetical protein bgla_2p0740 [Burkholderia gladioli BSR3] Length = 637 Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 139/596 (23%), Positives = 236/596 (39%), Gaps = 81/596 (13%) Query: 3 NPFEKRASESILGPRSLLPLVSPGPMDYFYSPQRKALFEKLTIWIGSPGCGKTTLARTLE 62 NPF +R SE + L SP ++ A + ++ +PG GKTTL R Sbjct: 6 NPFLERMSERTTSDMEFVRLFSPKILEKL---AEDAFDGAVHVFRSAPGAGKTTLLRAFT 62 Query: 63 LDSLLVLGTS---PTVNKELAMFLADIGVLEDG-APSLLTHRIPMTTNFRSIWELPYSTD 118 +L S P + + L + G+L +G +P LL + + + +LP + Sbjct: 63 PPALRAFWHSRNRPELAESFQKLL-NRGLLNEGESPQLLGVYLSCASGYA---DLPSTEG 118 Query: 119 LR-EDLLRAFVQSKSVLGWMRQL----------ERAEIDLDDVEIVLREDAESARAVMRT 167 L+ E L RA + + VL +R L + A++ LD + S + + Sbjct: 119 LQQEGLFRALLDCRVVLRTLRSLGSLLGFSTPEQLADVVLDHSHL------PSLQGIPEL 172 Query: 168 GNAREFRDYARTIELGVFKIVTALVPPSEEVFTQQMLNSRYDVFEEIIGIKIKRWPEGQW 227 NA E ++A E V+ + + P Q + II I R G Sbjct: 173 KNALELANWAEEHEQQVYAQLDTFMGPVNAALPAQFRFEGVLWLQSIIFIHEGRSVGG-- 230 Query: 228 KESILKPMVVIDDAHELHPNQYIHLRDWLKSRVITISRWIMCRLDIVAPEDYRDAVVRDS 287 K ++++DD H+L Q L D + +I W+ R + E Sbjct: 231 -----KRLLMVDDMHKLRRRQRALLVDEMTVMRPSIPIWLAERTVALGTE---------- 275 Query: 288 PDGENLTPGSKHGRD---YYVKLMQTTGARIRQFRKMSSDIADRYFARLPSFAENS-VKS 343 L+ G++ GRD Y + M + + QF + +I DR + S + Sbjct: 276 ----LLSQGAREGRDLREYNLDRMWSDAKGMNQFVSYAQNILDRRMKNQDAVPVGSFTQC 331 Query: 344 LAQALLVNTPKLSASH-LSELKKEIDKLAGNPHIAPGRLAALKSRVPISLPEDEQLAILR 402 L L+ + + S + +KE+++ N A A + +L QL + R Sbjct: 332 LRDELVSDEVRTQVSQGIERFRKEVERHQSNQRYAQWLARADQYTSDQNLESLLQLYVTR 391 Query: 403 ILLHREINNSPQLTLLDMEPQVVQVEEREIDDDDPSGEAIEKGKVRASVAEGARIQLMHQ 462 ILL R + S + LD+ + E E++D D S V A + + + Sbjct: 392 ILLVR--DESKRQMSLDL-----TLTEEELEDRDSS-----------QVRNAAELFMHEE 433 Query: 463 YKRPFYFGLDKLSDASDTNIEQFISLTGPLVSELMTKIIRRKSAD-LTPLAQHLSLQKTA 521 P+YFG D+L + N+E+ ++L L L K + RKS L+PL Q L++ A Sbjct: 434 LGIPYYFGFDRLCVMATNNVEELLALAAALYVGLQAKQVLRKSEPILSPLEQDKLLREAA 493 Query: 522 QDTMNEWDFPYRDNV-----QVLVNWIADRCLERTMLGHAPLDDGANAFGVLQEEM 572 + DF + + Q L++ I C ++T +AP G + + E+ Sbjct: 494 ---ARKRDFIPKSHTEGTRAQRLLDSIGAFCYDQTFAPNAPYAPGVTGVRLSRTEL 546