BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0536.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773440.1| DNA polymerase III subunit beta [Herbaspiril... 697 0.0 ref|YP_004750664.1| DNA polymerase III subunit beta [Collimonas ... 638 0.0 ref|YP_001351692.1| DNA polymerase III subunit beta [Janthinobac... 624 e-176 ref|YP_001098371.1| DNA polymerase III subunit beta [Herminiimon... 621 e-176 ref|ZP_08273138.1| DNA polymerase III beta subunit [Oxalobactera... 619 e-175 ref|YP_294228.1| DNA polymerase III subunit beta [Ralstonia eutr... 520 e-145 ref|ZP_04577636.1| DNA polymerase III subunit beta [Oxalobacter ... 519 e-145 ref|ZP_04579795.1| DNA polymerase III subunit beta [Oxalobacter ... 516 e-144 ref|YP_003743976.1| DNA polymerase III subunit beta [Ralstonia s... 514 e-144 ref|YP_001897601.1| DNA polymerase III subunit beta [Ralstonia p... 514 e-143 >ref|YP_003773440.1| DNA polymerase III subunit beta [Herbaspirillum seropedicae SmR1] gb|ADJ61532.1| DNA polymerase III subunit beta protein [Herbaspirillum seropedicae SmR1] Length = 368 Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/341 (100%), Positives = 341/341 (100%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG Sbjct: 28 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 87 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA Sbjct: 88 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 147 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR 180 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR Sbjct: 148 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR 207 Query: 181 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR 240 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR Sbjct: 208 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR 267 Query: 241 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL 300 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL Sbjct: 268 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL 327 Query: 301 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI Sbjct: 328 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 368 >ref|YP_004750664.1| DNA polymerase III subunit beta [Collimonas fungivorans Ter331] gb|AEK59841.1| DNA polymerase III beta subunit [Collimonas fungivorans Ter331] Length = 368 Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/341 (89%), Positives = 329/341 (96%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILANILIRK+GEKVSFLSTDIEVQITT+A VGSGSE ATTVAARKLLDILRALPD+G Sbjct: 28 LPILANILIRKEGEKVSFLSTDIEVQITTNAKVGSGSEVAATTVAARKLLDILRALPDTG 87 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 EVS++LSNKR+TVQSGKSRFALQTLAAEEFPTVAQA+HYNA V LPQKTLKHLFNMVHF+ Sbjct: 88 EVSLTLSNKRMTVQSGKSRFALQTLAAEEFPTVAQADHYNATVTLPQKTLKHLFNMVHFS 147 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR 180 MAQQDIRYYLNGLLLV++GKNVIAVATDGHRLAFCQV TE++F RQEVIIPRKTIIELQR Sbjct: 148 MAQQDIRYYLNGLLLVLDGKNVIAVATDGHRLAFCQVATEQEFARQEVIIPRKTIIELQR 207 Query: 181 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR 240 LL+++DE VQL+IANNQVKL+FADIELISKLVEGKFPDYTRVVPKGYKN FTISRDQLLR Sbjct: 208 LLEETDEPVQLEIANNQVKLSFADIELISKLVEGKFPDYTRVVPKGYKNDFTISRDQLLR 267 Query: 241 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL 300 SLQRAAIMTSDKFKGVRWV+ PGSLKISSTNADQEEA+EELEIDYGGD+VDIGFNV+YLL Sbjct: 268 SLQRAAIMTSDKFKGVRWVVTPGSLKISSTNADQEEAIEELEIDYGGDSVDIGFNVTYLL 327 Query: 301 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 DVLNNLK D VNIALGDANSSALIT+P+NADFKYVVMPMRI Sbjct: 328 DVLNNLKGDNVNIALGDANSSALITVPENADFKYVVMPMRI 368 >ref|YP_001351692.1| DNA polymerase III subunit beta [Janthinobacterium sp. Marseille] gb|ABR89081.1| DNA polymerase III beta subunit [Janthinobacterium sp. Marseille] Length = 368 Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust. Identities = 297/341 (87%), Positives = 326/341 (95%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILANILIRKDGE+VSFLSTDIEVQITTHA VGSG++ +TTVAARKLLDILRALPDSG Sbjct: 28 LPILANILIRKDGERVSFLSTDIEVQITTHAQVGSGNDVASTTVAARKLLDILRALPDSG 87 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 +VS++L+NKR+TVQSGKSRFALQTLAAEEFPTVAQAE YNA+V LPQKTLKHLFNMVHF+ Sbjct: 88 DVSLTLANKRMTVQSGKSRFALQTLAAEEFPTVAQAEQYNAKVTLPQKTLKHLFNMVHFS 147 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR 180 MAQQDIRYYLNGLLLVV+GKNVIAVATDGHRLAFCQV TE++FPRQEVIIPRKTIIELQR Sbjct: 148 MAQQDIRYYLNGLLLVVDGKNVIAVATDGHRLAFCQVATEQEFPRQEVIIPRKTIIELQR 207 Query: 181 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR 240 LL+++D+ V L+IANNQVKLTF DIELISKLVEGKFPDYTRVVPKGYKN+FTI RD LLR Sbjct: 208 LLEENDQPVDLEIANNQVKLTFGDIELISKLVEGKFPDYTRVVPKGYKNNFTIGRDALLR 267 Query: 241 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL 300 SLQRAAIMTSDKFKGVR +++PGS+KISSTNADQEEAVEE+EIDYGGD+VDIGFNV+YLL Sbjct: 268 SLQRAAIMTSDKFKGVRCIMSPGSMKISSTNADQEEAVEEIEIDYGGDSVDIGFNVTYLL 327 Query: 301 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 DVLNNLK D +NIALGDANSSALIT+PDN DFKYVVMPMRI Sbjct: 328 DVLNNLKGDSINIALGDANSSALITVPDNPDFKYVVMPMRI 368 >ref|YP_001098371.1| DNA polymerase III subunit beta [Herminiimonas arsenicoxydans] emb|CAL60242.1| DNA polymerase III, beta subunit [Herminiimonas arsenicoxydans] Length = 368 Score = 621 bits (1601), Expect = e-176, Method: Compositional matrix adjust. Identities = 297/341 (87%), Positives = 325/341 (95%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILANILIRKDGE+VSFLSTDIEVQITTHA VGSG+E +TTVAARKLLDILRALPDSG Sbjct: 28 LPILANILIRKDGERVSFLSTDIEVQITTHAQVGSGNEIASTTVAARKLLDILRALPDSG 87 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 +VS++L+NKR+TVQSGKSRFALQTLAAEEFPTVAQAE YNA+V LPQKTLKHLFNMVHF+ Sbjct: 88 DVSLTLANKRMTVQSGKSRFALQTLAAEEFPTVAQAEQYNAKVTLPQKTLKHLFNMVHFS 147 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR 180 MAQQDIRYYLNGLLLVV+GKNVIAVATDGHRLAFCQV TE++F RQEVIIPRKTIIELQR Sbjct: 148 MAQQDIRYYLNGLLLVVDGKNVIAVATDGHRLAFCQVATEQEFARQEVIIPRKTIIELQR 207 Query: 181 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR 240 LL+D+D+ V L+IAN+QVKLTF DIELISKLVEGKFPDYTRVVPKGYKN+FTI RD LLR Sbjct: 208 LLEDTDQPVDLEIANSQVKLTFGDIELISKLVEGKFPDYTRVVPKGYKNNFTIGRDALLR 267 Query: 241 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL 300 SLQRAAIMTSDKFKGVR +++PGS+KISSTNADQEEAVEE+EIDYGGD+VDIGFNV+YLL Sbjct: 268 SLQRAAIMTSDKFKGVRCIMSPGSMKISSTNADQEEAVEEIEIDYGGDSVDIGFNVTYLL 327 Query: 301 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 DVLNNLK D +NIALGDANSSALIT+PDN DFKYVVMPMRI Sbjct: 328 DVLNNLKGDNINIALGDANSSALITVPDNPDFKYVVMPMRI 368 >ref|ZP_08273138.1| DNA polymerase III beta subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF33395.1| DNA polymerase III beta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 351 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 297/341 (87%), Positives = 324/341 (95%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILANILIRKDG+KVSFLSTDIEVQITTH V G E ATTVAARKLLDILRALP+SG Sbjct: 11 LPILANILIRKDGDKVSFLSTDIEVQITTHITVDGGEELAATTVAARKLLDILRALPESG 70 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 +VS++L+NKR+TVQSGKSRFALQTLAAEEFPTV QAEHY+AQ++LPQKTLKHLFNMVHF+ Sbjct: 71 DVSLTLANKRMTVQSGKSRFALQTLAAEEFPTVTQAEHYSAQLSLPQKTLKHLFNMVHFS 130 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR 180 MAQQDIRYYLNGLLLVV+GKNVIAVATDGHRLAFCQVETE++F RQEVIIPRKTIIELQR Sbjct: 131 MAQQDIRYYLNGLLLVVDGKNVIAVATDGHRLAFCQVETEQEFTRQEVIIPRKTIIELQR 190 Query: 181 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR 240 LL+D+DE VQ+ IA NQVKLTFADIELISKLVEGKFPDYTRVVPKGYKN+FT+ RDQLLR Sbjct: 191 LLEDTDELVQIDIAPNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNNFTLGRDQLLR 250 Query: 241 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL 300 SLQRAAIMTSDKFKGVR ++ PGS+K+SSTNADQEE+VEE+EIDYGGD+VDIGFNV+YLL Sbjct: 251 SLQRAAIMTSDKFKGVRCIVTPGSMKVSSTNADQEESVEEIEIDYGGDSVDIGFNVTYLL 310 Query: 301 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 DVLNNLK D VNIALGDANSSALITIPDNADFKYVVMPMRI Sbjct: 311 DVLNNLKCDQVNIALGDANSSALITIPDNADFKYVVMPMRI 351 >ref|YP_294228.1| DNA polymerase III subunit beta [Ralstonia eutropha JMP134] gb|AAZ59384.1| DNA polymerase III, beta subunit [Ralstonia eutropha JMP134] Length = 371 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 251/345 (72%), Positives = 301/345 (87%), Gaps = 5/345 (1%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILAN+LIRK G VSFLSTDIE+QITTHA+ G G+++ ATTVAARKLLDILRA+PD G Sbjct: 28 LPILANLLIRKSGSNVSFLSTDIEIQITTHAECGVGNDSVATTVAARKLLDILRAMPD-G 86 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 +V++SL++KR+TVQSGKSRFALQTLAAEEFPTVA+A +NA V+LPQKT KHL MVHFA Sbjct: 87 DVALSLNDKRMTVQSGKSRFALQTLAAEEFPTVAEASEFNASVSLPQKTFKHLLAMVHFA 146 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDF----PRQEVIIPRKTII 176 MAQQDIRYYLNG+LLVV+GK V+AVATDGHRLA+C VE E + RQEVIIPRKTI+ Sbjct: 147 MAQQDIRYYLNGMLLVVDGKKVMAVATDGHRLAYCGVELENEATGVGSRQEVIIPRKTIL 206 Query: 177 ELQRLLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRD 236 ELQRLL+D+D+ VQ+Q+A NQVK +FA+IELISKLVEGKFPD+ RV+PKGYKN+F I R Sbjct: 207 ELQRLLEDNDDPVQVQLAANQVKFSFANIELISKLVEGKFPDFQRVIPKGYKNAFAIDRV 266 Query: 237 QLLRSLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNV 296 +L ++LQR AI+T+DKFKGVR ++ LKISSTNADQEEA EELEIDY GD +DIGFNV Sbjct: 267 RLQQALQRTAILTTDKFKGVRCILDTHMLKISSTNADQEEAQEELEIDYSGDALDIGFNV 326 Query: 297 SYLLDVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 +YLLDVL NLK++ V ++LGD+NSSALIT+P++ +FKYVVMPMRI Sbjct: 327 TYLLDVLANLKSEQVQVSLGDSNSSALITVPEDDNFKYVVMPMRI 371 >ref|ZP_04577636.1| DNA polymerase III subunit beta [Oxalobacter formigenes HOxBLS] gb|EEO28598.1| DNA polymerase III subunit beta [Oxalobacter formigenes HOxBLS] Length = 368 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 245/341 (71%), Positives = 291/341 (85%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILANILIRK+G VSFLSTD E+QI THA++G+ E TTVAARKLLDILRALPDS Sbjct: 28 LPILANILIRKEGNAVSFLSTDTEIQIVTHAEIGTAEEDATTTVAARKLLDILRALPDSA 87 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 E++ISL++KRL V +GKSRF+LQTL A +FPTV+Q Y V L QK+LK+L MV+FA Sbjct: 88 EIAISLNDKRLVVSAGKSRFSLQTLPAADFPTVSQPLEYQTSVTLSQKSLKNLLGMVYFA 147 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR 180 MAQQDIRYYLNGLLL G + AVATDGHRLAFCQ+ETE++F +VIIPRKTI+ELQR Sbjct: 148 MAQQDIRYYLNGLLLQTGGNTIKAVATDGHRLAFCQMETEQEFSNNDVIIPRKTILELQR 207 Query: 181 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR 240 LL++S+E V++ I+ QV+ F D+ELISKLVEGKFPDYTRV+PKGYKN FTISR+ L R Sbjct: 208 LLEESEEPVRIDISGAQVRFVFGDVELISKLVEGKFPDYTRVIPKGYKNKFTISRELLQR 267 Query: 241 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL 300 +LQRAAIMTSDKFKG+R ++APGSLKISSTNADQEEA+EE+E+DY GD +DIGFNV+YLL Sbjct: 268 ALQRAAIMTSDKFKGIRCILAPGSLKISSTNADQEEAIEEIELDYDGDNIDIGFNVTYLL 327 Query: 301 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 DVL NLKND ++I LGDANSSAL+++PDN DFKYVVMPMRI Sbjct: 328 DVLGNLKNDEISIELGDANSSALMSVPDNTDFKYVVMPMRI 368 >ref|ZP_04579795.1| DNA polymerase III subunit beta [Oxalobacter formigenes OXCC13] gb|EEO30768.1| DNA polymerase III subunit beta [Oxalobacter formigenes OXCC13] Length = 368 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 243/341 (71%), Positives = 298/341 (87%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILANILIRK+GE VSFLSTD E+QI THA++G+ E T TTVAARKLLDILRALPD+ Sbjct: 28 LPILANILIRKEGEAVSFLSTDTEIQIVTHAEIGTNEENTTTTVAARKLLDILRALPDTS 87 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 +++IS ++KRL VQ+GKSRF+LQTL A++FP V+Q Y V + QK LK+L MV+F+ Sbjct: 88 DIAISQNDKRLVVQAGKSRFSLQTLPADDFPIVSQPAEYETSVTVSQKALKNLLGMVYFS 147 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEEDFPRQEVIIPRKTIIELQR 180 MAQQDIRYYLNGLLL V+G + AVATDGHRLAFCQ+ET+++F + +VIIPRKTI+ELQR Sbjct: 148 MAQQDIRYYLNGLLLQVDGNKMTAVATDGHRLAFCQMETDQEFSKNDVIIPRKTILELQR 207 Query: 181 LLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRDQLLR 240 LL+DSDE V++ + QV+ F D+ELISKLVEGKFPDYTRV+PKGYKN FT+SR+QL R Sbjct: 208 LLEDSDEPVRIDFSGGQVRFVFGDVELISKLVEGKFPDYTRVIPKGYKNKFTLSREQLQR 267 Query: 241 SLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNVSYLL 300 +LQRAAIMTSDKFKG+R ++APGSLKISSTNADQEEA+EE+E+DYGGD++DIGFNV+YLL Sbjct: 268 ALQRAAIMTSDKFKGIRCILAPGSLKISSTNADQEEAIEEIELDYGGDSIDIGFNVTYLL 327 Query: 301 DVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 DVL NLKN+ V++ LGDANSSAL+++PDN+DFKYVVMPMRI Sbjct: 328 DVLGNLKNEQVSVELGDANSSALVSVPDNSDFKYVVMPMRI 368 >ref|YP_003743976.1| DNA polymerase III subunit beta [Ralstonia solanacearum CFBP2957] emb|CBJ41322.1| DNA polymerase III, beta-subunit [Ralstonia solanacearum CFBP2957] Length = 371 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 252/345 (73%), Positives = 298/345 (86%), Gaps = 5/345 (1%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILAN+LIRK+GE+VSFLSTDIE+QITTHAD G+G+ ATTVAARKL+DILRA+PD G Sbjct: 28 LPILANLLIRKNGERVSFLSTDIEIQITTHADCGAGNGDIATTVAARKLVDILRAMPD-G 86 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 EVS++L++KR++VQSGKSRFALQTLAAEEFPTVA+A + A++ LPQKTLKHL MVHFA Sbjct: 87 EVSLTLNDKRMSVQSGKSRFALQTLAAEEFPTVAEANDFGARITLPQKTLKHLLAMVHFA 146 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEED----FPRQEVIIPRKTII 176 MAQQDIRYYLNG+LLVV+GK V+AVATDGHRLA+C VET E R EVIIPRKTI+ Sbjct: 147 MAQQDIRYYLNGMLLVVDGKQVMAVATDGHRLAYCGVETGEQPAGAGGRHEVIIPRKTIL 206 Query: 177 ELQRLLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRD 236 ELQRLL+D D+ V +Q+A+NQVK TF +IELISKLVEGKFPD+ RV+PKGY+NSFTI R Sbjct: 207 ELQRLLEDVDDPVSVQLASNQVKFTFGNIELISKLVEGKFPDFQRVIPKGYRNSFTIDRT 266 Query: 237 QLLRSLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNV 296 L ++LQR AI+T+DKFKGVR ++ LKISSTNADQEEA EELEIDY GD +DIGFNV Sbjct: 267 FLQQALQRTAILTTDKFKGVRCMLDTNVLKISSTNADQEEAQEELEIDYQGDALDIGFNV 326 Query: 297 SYLLDVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 +YLLDVL NLK + V ++LGD+NSSALIT+PD+ FKYVVMPMRI Sbjct: 327 TYLLDVLANLKAEKVQVSLGDSNSSALITLPDDDTFKYVVMPMRI 371 >ref|YP_001897601.1| DNA polymerase III subunit beta [Ralstonia pickettii 12J] ref|ZP_07674932.1| DNA polymerase III, beta subunit [Ralstonia sp. 5_7_47FAA] gb|ACD25169.1| DNA polymerase III, beta subunit [Ralstonia pickettii 12J] gb|EFP66530.1| DNA polymerase III, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 371 Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust. Identities = 252/345 (73%), Positives = 297/345 (86%), Gaps = 5/345 (1%) Query: 1 LPILANILIRKDGEKVSFLSTDIEVQITTHADVGSGSEATATTVAARKLLDILRALPDSG 60 LPILAN+LI K GE+VSFLSTDIE+QITTHAD G+G+ ATTVAARKL+DILRA+PD G Sbjct: 28 LPILANLLITKQGERVSFLSTDIEIQITTHADCGAGAGDVATTVAARKLVDILRAMPD-G 86 Query: 61 EVSISLSNKRLTVQSGKSRFALQTLAAEEFPTVAQAEHYNAQVNLPQKTLKHLFNMVHFA 120 EV+++L++KR+TVQSGKSRFALQTLAAEEFPTVA+A + A++ LPQKTLKHL MVHFA Sbjct: 87 EVALTLNDKRMTVQSGKSRFALQTLAAEEFPTVAEATDFGARITLPQKTLKHLLAMVHFA 146 Query: 121 MAQQDIRYYLNGLLLVVEGKNVIAVATDGHRLAFCQVETEED----FPRQEVIIPRKTII 176 MAQQDIRYYLNG+LLVV+GK V+AVATDGHRLA+C VET E RQEVIIPRKTI+ Sbjct: 147 MAQQDIRYYLNGMLLVVDGKQVMAVATDGHRLAYCGVETGEQPAGAGGRQEVIIPRKTIL 206 Query: 177 ELQRLLDDSDEEVQLQIANNQVKLTFADIELISKLVEGKFPDYTRVVPKGYKNSFTISRD 236 ELQRLL+D D+ V +Q+A+NQVK TF +IELISKLVEGKFPD+ RV+PKGY+NSFTI R Sbjct: 207 ELQRLLEDVDDPVSVQLASNQVKFTFGNIELISKLVEGKFPDFQRVIPKGYRNSFTIDRA 266 Query: 237 QLLRSLQRAAIMTSDKFKGVRWVIAPGSLKISSTNADQEEAVEELEIDYGGDTVDIGFNV 296 L ++LQR AI+T+DKFKGVR ++ LKISSTNADQEEA EELEIDY GD +DIGFNV Sbjct: 267 FLQQALQRTAILTTDKFKGVRCMLDTNVLKISSTNADQEEAQEELEIDYQGDALDIGFNV 326 Query: 297 SYLLDVLNNLKNDYVNIALGDANSSALITIPDNADFKYVVMPMRI 341 +YLLDVL NLK + V ++LGD+NSSALIT+PD+ FKYVVMPMRI Sbjct: 327 TYLLDVLANLKAEKVQVSLGDSNSSALITLPDDDTFKYVVMPMRI 371