BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0523.p (539 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778166.1| choline dehydrogenase [Herbaspirillum serope... 1122 0.0 ref|YP_004755056.1| glucose-methanol-choline oxidoreductase [Col... 874 0.0 ref|YP_004687387.1| choline dehydrogenase BetA [Cupriavidus neca... 744 0.0 ref|YP_001901091.1| glucose-methanol-choline oxidoreductase [Ral... 739 0.0 ref|YP_585662.1| choline dehydrogenase [Cupriavidus metalliduran... 738 0.0 gb|EFV86570.1| glucose-methanol-choline oxidoreductase:FAD depen... 737 0.0 ref|YP_297574.1| glucose-methanol-choline oxidoreductase:FAD dep... 737 0.0 ref|YP_003744085.1| choline dehydrogenase [Ralstonia solanacearu... 736 0.0 ref|ZP_07675148.1| oxidoreductase, GMC family [Ralstonia sp. 5_7... 735 0.0 ref|YP_003750799.1| choline dehydrogenase [Ralstonia solanacearu... 735 0.0 >ref|YP_003778166.1| choline dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ66258.1| choline dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 539 Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 538/539 (99%) Query: 1 MQSAGQYDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNP 60 MQSAGQYDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNP Sbjct: 1 MQSAGQYDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNP 60 Query: 61 RTDWMFRTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRW 120 RTDWMFRTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYD WADVTGDDSWRW Sbjct: 61 RTDWMFRTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDHWADVTGDDSWRW 120 Query: 121 QNVLPLFKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCG 180 QNVLPLFKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCG Sbjct: 121 QNVLPLFKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCG 180 Query: 181 DNEGCGYFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVE 240 DNEGCGYFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVE Sbjct: 181 DNEGCGYFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVE 240 Query: 241 FTGGGSAWFAEAKETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDH 300 FTGGGSAWFAEAKETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDH Sbjct: 241 FTGGGSAWFAEAKETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDH 300 Query: 301 LQMRMVFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASA 360 LQMRMVFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASA Sbjct: 301 LQMRMVFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASA 360 Query: 361 NLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTE 420 NLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTE Sbjct: 361 NLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTE 420 Query: 421 EDLKVAANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTC 480 EDLKVAANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTC Sbjct: 421 EDLKVAANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTC 480 Query: 481 RMGRSDDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSLLSRA 539 RMGRSDDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSLLSRA Sbjct: 481 RMGRSDDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSLLSRA 539 >ref|YP_004755056.1| glucose-methanol-choline oxidoreductase [Collimonas fungivorans Ter331] gb|AEK64233.1| glucose-methanol-choline oxidoreductase [Collimonas fungivorans Ter331] Length = 556 Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/537 (77%), Positives = 466/537 (86%), Gaps = 5/537 (0%) Query: 1 MQSAGQYDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNP 60 M+SAG+YDYIIIGAGTAGCV+ANRL++ + KVLLIEAGAKDDYIWIHIPVGYLYCINNP Sbjct: 11 MESAGKYDYIIIGAGTAGCVLANRLTQDSSVKVLLIEAGAKDDYIWIHIPVGYLYCINNP 70 Query: 61 RTDWMFRTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRW 120 RTDWM+RTE DAGLNGRSLIYPRGKVLGG SSINGMIYMRGQARDYDQWA +TGD +WRW Sbjct: 71 RTDWMYRTEPDAGLNGRSLIYPRGKVLGGSSSINGMIYMRGQARDYDQWAQLTGDPAWRW 130 Query: 121 QNVLPLFKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCG 180 + VLPLFKKSED++ GA +FHGAGGEWRVEKQRL W ILDAFRDAAAE GIPKV+DFN G Sbjct: 131 EQVLPLFKKSEDHYNGADEFHGAGGEWRVEKQRLSWKILDAFRDAAAEVGIPKVDDFNRG 190 Query: 181 DNEGCGYFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGE----QGPVC 236 DNEGC YFDVNQKRG+RWNA+KAFLR A GNLTIMTG V RL +E+ E QG VC Sbjct: 191 DNEGCSYFDVNQKRGIRWNAAKAFLRSASGRGNLTIMTGCQVKRLLLERSEEDQRQGLVC 250 Query: 237 TGVEFTGGGSAWFAEA-KETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGE 295 GVEF+GGG W AEA +ET+L AGA+GSPHILQ+SGI ALLQQHQIPV+ PGVGE Sbjct: 251 KGVEFSGGGKEWRAEASRETLLSAGAVGSPHILQLSGIGPAALLQQHQIPVMQDTPGVGE 310 Query: 296 NLQDHLQMRMVFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDA 355 NLQDHLQ+RM FKVNG KTLNAM+S+ +GK +IGL+YL QSGPMSMAPSQLGAFAKSDA Sbjct: 311 NLQDHLQIRMAFKVNGVKTLNAMSSSWLGKARIGLEYLLMQSGPMSMAPSQLGAFAKSDA 370 Query: 356 QQASANLQYHVQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTN 415 QA+ANL+YHVQPLSLEKFGDPLHAFPAFTASVCNLRP+SRGHV++ASG AP+IT N Sbjct: 371 GQATANLEYHVQPLSLEKFGDPLHAFPAFTASVCNLRPSSRGHVQIASGLAEGAPKITLN 430 Query: 416 YLSTEEDLKVAANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFH 475 YL TEED KVAA +L LTRRIAA+PAL +Y PEE+KPG Y TEE+L +AAGE+GTTIFH Sbjct: 431 YLDTEEDRKVAAASLLLTRRIAAAPALRKYAPEEFKPGPQYRTEEELIKAAGEIGTTIFH 490 Query: 476 PVGTCRMGRSDDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVA 532 PVGTC+MGR DD MAVVD+Q RV+GV GL V DASVMP+ITSGNTNSPT+MIAE A Sbjct: 491 PVGTCKMGRGDDPMAVVDSQLRVKGVAGLRVVDASVMPTITSGNTNSPTLMIAEMAA 547 >ref|YP_004687387.1| choline dehydrogenase BetA [Cupriavidus necator N-1] gb|AEI78906.1| choline dehydrogenase BetA [Cupriavidus necator N-1] Length = 561 Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/531 (67%), Positives = 423/531 (79%), Gaps = 6/531 (1%) Query: 7 YDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNPRTDWMF 66 +DYII+GAG+AGCV+ANRL++ VLL+EAG KDDY WIHIPVGYLYCI NPRTDW++ Sbjct: 10 FDYIIVGAGSAGCVLANRLTQDADVNVLLLEAGGKDDYHWIHIPVGYLYCIGNPRTDWLY 69 Query: 67 RTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRWQNVLPL 126 RTEA+AGLNGRSL YPRG+VLGGCSSINGMIYMRGQ DYD WA +TGDD WRW NVLPL Sbjct: 70 RTEAEAGLNGRSLGYPRGRVLGGCSSINGMIYMRGQREDYDAWARLTGDDGWRWDNVLPL 129 Query: 127 FKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCGDNEGCG 186 FK+SED+H G +FHGAGGEWRVE QRLRWDIL+ F DAA E GIP+ EDFN GDN G G Sbjct: 130 FKRSEDHHRGPSEFHGAGGEWRVEGQRLRWDILERFADAAEEAGIPRTEDFNRGDNFGVG 189 Query: 187 YFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVEFTGGGS 246 YF+VNQ+RG+RWN +KAFLR A + NLTI+TG+ VS L + G CTGV + GGG Sbjct: 190 YFEVNQRRGIRWNTAKAFLRRASERPNLTIVTGAQVSGLTFD----GRRCTGVNYIGGGR 245 Query: 247 AWFAEAK-ETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRM 305 A A A+ E IL AGA+ +P +L++SGI LQ IPV HALPGVGENLQDHLQ+R Sbjct: 246 AQTAVARQEVILAAGAVNTPQLLELSGIGQAERLQALGIPVRHALPGVGENLQDHLQLRS 305 Query: 306 VFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASANLQYH 365 V KV+G +TLN A++L GK IG+QY F QSGPMSMAPSQLGAFA+SD QA N++YH Sbjct: 306 VVKVSGVRTLNTRAASLWGKFCIGVQYAFNQSGPMSMAPSQLGAFARSDLAQARPNVEYH 365 Query: 366 VQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTEEDLKV 425 VQPLSL+KFGDPLHAF AFTAS CNLRPTSRG V + S D AP I NYL+T+ED KV Sbjct: 366 VQPLSLDKFGDPLHAFNAFTASACNLRPTSRGSVHIGSADFRQAPVIAPNYLATDEDRKV 425 Query: 426 AANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTCRMGRS 485 AA+++RLTRRI ASPAL+ Y+PEE+ PG ++T+E L AAG +GTTIFHPVGTC+MGR+ Sbjct: 426 AADSIRLTRRIVASPALAPYQPEEWLPGPAFQTDEQLAEAAGNIGTTIFHPVGTCKMGRA 485 Query: 486 DDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSLL 536 DD MAVVD + RV G+ GL V DASVMP ITSGNTNSPT+MIAE+ AS L+ Sbjct: 486 DDPMAVVDHRLRVLGIDGLRVVDASVMPLITSGNTNSPTIMIAER-ASDLI 535 >ref|YP_001901091.1| glucose-methanol-choline oxidoreductase [Ralstonia pickettii 12J] gb|ACD28659.1| glucose-methanol-choline oxidoreductase [Ralstonia pickettii 12J] Length = 544 Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/530 (67%), Positives = 413/530 (77%), Gaps = 5/530 (0%) Query: 7 YDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNPRTDWMF 66 YDYIIIGAG+AGCV+ANRL+R VLL+EAG KDDY WIHIPVGYLYCI NPRTDW++ Sbjct: 4 YDYIIIGAGSAGCVLANRLTRDPDVSVLLLEAGGKDDYHWIHIPVGYLYCIGNPRTDWLY 63 Query: 67 RTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRWQNVLPL 126 RT + GLNGRSL YPRG+VLGGCSSINGMIYMRGQ DYD WA +TGDDSWRW VLPL Sbjct: 64 RTREEPGLNGRSLGYPRGRVLGGCSSINGMIYMRGQREDYDGWAAITGDDSWRWDAVLPL 123 Query: 127 FKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCGDNEGCG 186 FK SE+YH GA +HGA GEWRVE QRL W +L+ F +AA + GIP+ DFN GDN G G Sbjct: 124 FKASENYHGGANAWHGANGEWRVEPQRLHWQVLETFIEAAVQAGIPRTSDFNRGDNFGVG 183 Query: 187 YFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVEFTGGGS 246 YF+VNQKRG+RWN +K FLRPA + NLTI+TG+ V L + G CTGV + G G Sbjct: 184 YFEVNQKRGIRWNTAKGFLRPASQRPNLTIVTGAQVRALTFD----GKRCTGVTYRGAGQ 239 Query: 247 AWFAEAKE-TILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRM 305 + A+E IL AGAI SP +L+++GI P LQ IPV ALPGVGENLQDHLQ+R Sbjct: 240 DYTVAAREEVILSAGAINSPQLLELAGIGQPERLQALGIPVRQALPGVGENLQDHLQLRS 299 Query: 306 VFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASANLQYH 365 V KVNG TLN AS GK IG+QY F QSGPMSMAPSQLG FA+S+ + +++YH Sbjct: 300 VVKVNGVPTLNTRASNWWGKALIGMQYAFNQSGPMSMAPSQLGVFARSNPHVSRPDVEYH 359 Query: 366 VQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTEEDLKV 425 VQPLSL+KFGDPLHAF AFTASVCNLRPTSRG V + S D AP I NYLSTEED KV Sbjct: 360 VQPLSLDKFGDPLHAFNAFTASVCNLRPTSRGTVHVTSADPFAAPTIAPNYLSTEEDRKV 419 Query: 426 AANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTCRMGRS 485 AA++LRLTRRI A PAL++YRPEEY PGA ++T+E+L RAAGE+GTTIFHPVGTCRMGR+ Sbjct: 420 AADSLRLTRRIVAQPALAQYRPEEYLPGAAFQTDEELARAAGEIGTTIFHPVGTCRMGRA 479 Query: 486 DDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSL 535 DDA AVVDAQ RVRG+ GL V DASVMP+ITSGNTNSPT+MIAEK + + Sbjct: 480 DDANAVVDAQLRVRGIEGLRVVDASVMPTITSGNTNSPTIMIAEKASEMI 529 >ref|YP_585662.1| choline dehydrogenase [Cupriavidus metallidurans CH34] gb|ABF10393.1| choline dehydrogenase, a flavoprotein [Cupriavidus metallidurans CH34] Length = 555 Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/530 (67%), Positives = 422/530 (79%), Gaps = 2/530 (0%) Query: 7 YDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNPRTDWMF 66 +DYII+GAG+AGCV+ANRL++ + VLL+EAG KDDY WIHIPVGYLYCI NPRTDW++ Sbjct: 4 FDYIIVGAGSAGCVLANRLTQDSDVNVLLLEAGGKDDYHWIHIPVGYLYCIGNPRTDWLY 63 Query: 67 RTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRWQNVLPL 126 RT A+AGLNGRSL YPRG+VLGG SSINGMIYMRGQ DYD WA +TGDD WRW NVLP Sbjct: 64 RTVAEAGLNGRSLGYPRGRVLGGSSSINGMIYMRGQREDYDDWARITGDDGWRWDNVLPF 123 Query: 127 FKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCGDNEGCG 186 FK+SED+H GA +FHGAGGEWRVE QRLRW+IL+ F +AA + GIP+ +DFN GDN G G Sbjct: 124 FKRSEDHHRGANEFHGAGGEWRVEAQRLRWEILECFIEAAEQAGIPRTDDFNRGDNFGVG 183 Query: 187 YFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVEFTGGGS 246 YF+VNQ+RG+RWN SKAFLR A + NLTI+TG+ VS L + + G CTGV++ GGG Sbjct: 184 YFEVNQRRGIRWNTSKAFLRRAAERPNLTIVTGAQVSALTFDSPD-GLRCTGVQYLGGGQ 242 Query: 247 AWFAEAK-ETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRM 305 A AK E IL AGAIGSP +L+++GI P LQ I V HAL GVGENLQDHLQ+R Sbjct: 243 PHEARAKQEVILAAGAIGSPQLLELAGIGQPDRLQALGIRVRHALRGVGENLQDHLQLRS 302 Query: 306 VFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASANLQYH 365 V KV G +TLN A+ GK+ IGLQY F QSGPMSMAPSQLGAFA+SD +Q AN++YH Sbjct: 303 VVKVQGVRTLNTQAAHWWGKLGIGLQYAFNQSGPMSMAPSQLGAFARSDPEQPRANIEYH 362 Query: 366 VQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTEEDLKV 425 VQPLSL+KFGDPLH+F AFTAS CNLRPTSRG V + D AP I NYLSTEED KV Sbjct: 363 VQPLSLDKFGDPLHSFNAFTASACNLRPTSRGSVHIEDTDFRRAPLIAPNYLSTEEDRKV 422 Query: 426 AANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTCRMGRS 485 AA+++RLTRRI +SPAL+RY+P+EY PGA ++T+E+L AAG +GTTIFHPVGTCRMG + Sbjct: 423 AADSIRLTRRIVSSPALARYKPQEYLPGATFQTDEELAEAAGAIGTTIFHPVGTCRMGGA 482 Query: 486 DDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSL 535 DDA AVVD + RVRG+ GL V DASVMP ITSGNTNSPT+MIAE+ + + Sbjct: 483 DDADAVVDNRLRVRGISGLRVVDASVMPLITSGNTNSPTIMIAERASDMI 532 >gb|EFV86570.1| glucose-methanol-choline oxidoreductase:FAD dependent oxidoreductase:GMC oxidoreductase [Achromobacter xylosoxidans C54] Length = 547 Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/534 (66%), Positives = 419/534 (78%), Gaps = 5/534 (0%) Query: 7 YDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNPRTDWMF 66 YDYII+GAG+AGCV+ANRLSR +VLL+EAG +D+Y WIHIPVGYLYCI NPRTDWM+ Sbjct: 4 YDYIIVGAGSAGCVLANRLSRDPTVRVLLLEAGGRDNYHWIHIPVGYLYCIGNPRTDWMY 63 Query: 67 RTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRWQNVLPL 126 RT A+ GL GRSLIYPRG+VLGGCSSINGMIYMRGQ +DYDQWA++ GD SWRW VLP+ Sbjct: 64 RTGAEPGLGGRSLIYPRGRVLGGCSSINGMIYMRGQRQDYDQWAEIAGDPSWRWDQVLPV 123 Query: 127 FKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCGDNEGCG 186 FK+SED+H GA +FHGAGGEWRVE QRLRWDILDAF AA + GIP+V DFN GDN G G Sbjct: 124 FKRSEDHHRGADEFHGAGGEWRVEAQRLRWDILDAFASAAEQEGIPRVADFNRGDNFGVG 183 Query: 187 YFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVEFT-GGG 245 YFDVNQ+RG RWN +KAFLRP + NL +MTG+H RL E G C GV+ G Sbjct: 184 YFDVNQRRGWRWNTAKAFLRPVRERANLQVMTGAHAERLLFE----GTRCVGVQVRRDGQ 239 Query: 246 SAWFAEAKETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRM 305 SA A+E +L AGA+ +P +L++SGI +PA L++ I + HALPGVGENLQDHLQ+R+ Sbjct: 240 SASVRAAREVVLAAGAVNTPQLLELSGIGEPARLRESGIALHHALPGVGENLQDHLQLRV 299 Query: 306 VFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASANLQYH 365 + KV G KTLN +AST GK IGL+YL +SGPMSMAPSQLGAFAKSD QA ANL++H Sbjct: 300 ILKVRGVKTLNRIASTWWGKAGIGLEYLLNRSGPMSMAPSQLGAFAKSDPGQARANLEFH 359 Query: 366 VQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTEEDLKV 425 VQPLSL FG+PLH F AFTASVCNLRP SRG V D +L P IT NYL E+DLKV Sbjct: 360 VQPLSLGAFGEPLHGFDAFTASVCNLRPVSRGSVHAQGADGSLPPVITPNYLKEEQDLKV 419 Query: 426 AANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTCRMGRS 485 AA+A+RL RRI+A+PAL RY+PEE+ PG Y++E +L AAG++GTTIFHPVGTC MGR Sbjct: 420 AADAIRLVRRISAAPALQRYQPEEWLPGPAYQSEAELREAAGKIGTTIFHPVGTCAMGRR 479 Query: 486 DDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSLLSRA 539 D AVVDA+ RV G+ GL VADAS+MP+ITSGNTNSPT+MIAE+ A +L A Sbjct: 480 ADDGAVVDARLRVHGLQGLRVADASIMPTITSGNTNSPTIMIAERAAQMILEDA 533 >ref|YP_297574.1| glucose-methanol-choline oxidoreductase:FAD dependent oxidoreductase:GMC oxidoreductase [Ralstonia eutropha JMP134] gb|AAZ62730.1| Glucose-methanol-choline oxidoreductase:FAD dependent oxidoreductase:GMC oxidoreductase [Ralstonia eutropha JMP134] Length = 539 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/530 (67%), Positives = 416/530 (78%), Gaps = 5/530 (0%) Query: 7 YDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNPRTDWMF 66 +DYII+GAG+AGCV+ANRL++ VLL+EAG KDDY WIHIPVGYLYCI NPRTDW++ Sbjct: 4 FDYIIVGAGSAGCVLANRLTQDADVNVLLLEAGGKDDYHWIHIPVGYLYCIGNPRTDWLY 63 Query: 67 RTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRWQNVLPL 126 RT A+ GLNGRSL YPRG+VLGG SSINGMIYMRGQ DYD WA ++GDD WRW NVLPL Sbjct: 64 RTVAEKGLNGRSLGYPRGRVLGGSSSINGMIYMRGQREDYDDWARLSGDDGWRWDNVLPL 123 Query: 127 FKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCGDNEGCG 186 FK+SED+H G +FHGAGGEWRVE QRLRWDIL+ F DAA + GIP+ +DFN GDN G G Sbjct: 124 FKRSEDHHRGPSEFHGAGGEWRVEAQRLRWDILERFIDAAEQAGIPRTDDFNRGDNFGVG 183 Query: 187 YFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVEFTGGGS 246 YF+VNQ+RG+RWN SKAFLR A NLTI+TG+ VS L E G CTGV + GGG Sbjct: 184 YFEVNQRRGIRWNTSKAFLRRAADRPNLTIVTGAQVSALTFE----GRRCTGVNYVGGGQ 239 Query: 247 AWFAEAK-ETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRM 305 A A A+ E IL AGA+ +P +L++SGI LQ I V HALPGVGENLQDHLQ+R Sbjct: 240 AHSAAARHEVILAAGAVNTPQLLELSGIGQGERLQALGIQVRHALPGVGENLQDHLQLRT 299 Query: 306 VFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASANLQYH 365 V KVNG +TLN ++ GK+ IGL+Y F QSGPMSMAPSQLGAFA+SDA QA NL+YH Sbjct: 300 VVKVNGVRTLNTRVASWWGKLGIGLEYAFNQSGPMSMAPSQLGAFARSDASQARPNLEYH 359 Query: 366 VQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTEEDLKV 425 VQPLSL+KFG+PLHAF AFTASVCNLRPTSRG V + S D AP I NYLST+ED KV Sbjct: 360 VQPLSLDKFGEPLHAFNAFTASVCNLRPTSRGSVHIDSADFRQAPVIAPNYLSTDEDRKV 419 Query: 426 AANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTCRMGRS 485 AA++LRLTRRI ASPAL+ YRPEE+ PG +ET+E L AAG +GTTIFHPVGTCRMGR Sbjct: 420 AADSLRLTRRIVASPALAPYRPEEWLPGPGFETDEALAEAAGNIGTTIFHPVGTCRMGRP 479 Query: 486 DDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSL 535 DD +AVVD + RV G+ GL V DASVMP ITSGNTNSPT+MIAE+ + L Sbjct: 480 DDPLAVVDHRLRVHGIEGLRVVDASVMPLITSGNTNSPTIMIAERASDML 529 >ref|YP_003744085.1| choline dehydrogenase [Ralstonia solanacearum CFBP2957] emb|CBJ41436.1| putative choline dehydrogenase [Ralstonia solanacearum CFBP2957] Length = 555 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/530 (67%), Positives = 415/530 (78%), Gaps = 5/530 (0%) Query: 7 YDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNPRTDWMF 66 YDYIIIGAG+AGCV+ANRL+ VLL+EAG KDDY WIHIPVGYLYCI NPRTDW++ Sbjct: 4 YDYIIIGAGSAGCVLANRLTLDPEVSVLLLEAGGKDDYHWIHIPVGYLYCIGNPRTDWLY 63 Query: 67 RTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRWQNVLPL 126 RT+A+ GLNGRSL YPRG+VLGGCSSINGMIYMRGQ DYD WA +TGDD+WRW VLP Sbjct: 64 RTQAEPGLNGRSLGYPRGRVLGGCSSINGMIYMRGQREDYDGWAALTGDDTWRWDAVLPF 123 Query: 127 FKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCGDNEGCG 186 FK SE YH GA +HG GGEWRVE QRLRW IL+ F +AA + GIP+ EDFN GDN G G Sbjct: 124 FKASEHYHGGANAWHGVGGEWRVEPQRLRWQILERFIEAAVQAGIPRTEDFNRGDNFGVG 183 Query: 187 YFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVEFTGGGS 246 YF+VNQKRG+RWN +K FLRPA + NLTI+TG+ V LR + G CTGV + G G Sbjct: 184 YFEVNQKRGIRWNTAKGFLRPASQRPNLTIVTGAQVRALRFD----GRRCTGVTYHGAGQ 239 Query: 247 AWFAEAKE-TILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRM 305 + A+E +L AGAI SP +L+++GI P LQ I V HALPGVGENLQDHLQ+R Sbjct: 240 DYAVAAREEVVLSAGAINSPQLLELAGIGQPQRLQALGIAVRHALPGVGENLQDHLQLRS 299 Query: 306 VFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASANLQYH 365 V KV+G TLN A+ GK IG+QY F +SGPMSMAPSQLGAFA+SD A +++YH Sbjct: 300 VIKVHGVPTLNTRAANWWGKAMIGMQYAFNRSGPMSMAPSQLGAFARSDPSVARPDVEYH 359 Query: 366 VQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTEEDLKV 425 VQPLSL+KFGDPLHAF AFTASVCNLRPTSRG V +AS D AP I NYLST+ D KV Sbjct: 360 VQPLSLDKFGDPLHAFNAFTASVCNLRPTSRGTVHIASADPFAAPLIAPNYLSTDADRKV 419 Query: 426 AANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTCRMGRS 485 AA++LRLTRRI + PAL+RYRPEEY PGA ++T+E L RAAGE+GTTIFHPVGTCRMGR+ Sbjct: 420 AADSLRLTRRIVSQPALARYRPEEYLPGAAFQTDEALARAAGEIGTTIFHPVGTCRMGRA 479 Query: 486 DDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSL 535 DDA AVVDAQ RVRG+ GL V DASVMP+ITSGNTNSPT+MIAEK + + Sbjct: 480 DDAGAVVDAQLRVRGIEGLRVVDASVMPTITSGNTNSPTIMIAEKASEMI 529 >ref|ZP_07675148.1| oxidoreductase, GMC family [Ralstonia sp. 5_7_47FAA] gb|EFP66438.1| oxidoreductase, GMC family [Ralstonia sp. 5_7_47FAA] Length = 544 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/530 (66%), Positives = 414/530 (78%), Gaps = 5/530 (0%) Query: 7 YDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNPRTDWMF 66 YDYIIIGAG+AGCV+ANRL+R VLL+EAG KDDY WIHIPVGYLYCI NPRTDW++ Sbjct: 4 YDYIIIGAGSAGCVLANRLTRDPDVSVLLLEAGGKDDYHWIHIPVGYLYCIGNPRTDWLY 63 Query: 67 RTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRWQNVLPL 126 RT + GLNGRSL YPRG+VLGGCSSINGMIYMRGQ DYD WA +TGDDSW+W VLPL Sbjct: 64 RTREEPGLNGRSLGYPRGRVLGGCSSINGMIYMRGQREDYDGWAAITGDDSWKWDAVLPL 123 Query: 127 FKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCGDNEGCG 186 FK SE++H GA ++HGA GEWRVE QRL W +L+ F +AA + GIP+ DFN GDN G G Sbjct: 124 FKASENHHGGANEWHGANGEWRVEPQRLHWQVLETFIEAAVQAGIPRTSDFNRGDNFGVG 183 Query: 187 YFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVEFTGGGS 246 YF+VNQKRG+RWN +K FLRPA + NLTI+TG+ V L + G CTGV + G G Sbjct: 184 YFEVNQKRGIRWNTAKGFLRPASQRPNLTIVTGAQVRALTFD----GKRCTGVTYRGAGQ 239 Query: 247 AWFAEAKE-TILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRM 305 + A+E IL AGAI SP +L+++GI P LQ IPV ALPGVGENLQDHLQ+R Sbjct: 240 DYTVAAREEVILSAGAINSPQLLELAGIGQPERLQALGIPVRQALPGVGENLQDHLQLRS 299 Query: 306 VFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASANLQYH 365 V KVNG TLN AS GK IG+QY F QSGPMSMAPSQLG FA+S+ + +++YH Sbjct: 300 VVKVNGVPTLNTRASNWWGKALIGMQYAFNQSGPMSMAPSQLGVFARSNPHVSRPDVEYH 359 Query: 366 VQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTEEDLKV 425 VQPLSL+KFGDPLHAF AFTASVCNLRPTSRG V + S D AP I NYLSTEED KV Sbjct: 360 VQPLSLDKFGDPLHAFNAFTASVCNLRPTSRGTVHVTSADPFAAPTIAPNYLSTEEDRKV 419 Query: 426 AANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTCRMGRS 485 AA++LRLTRRI A PAL++Y+PEEY PGA ++T+E+L RAAGE+GTTIFHPVGTCRMGR+ Sbjct: 420 AADSLRLTRRIVAQPALAQYKPEEYLPGAAFQTDEELARAAGEIGTTIFHPVGTCRMGRA 479 Query: 486 DDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSL 535 DDA AVVDAQ RVRG+ GL V DASVMP+ITSGNTNSPT+MIAEK + + Sbjct: 480 DDANAVVDAQLRVRGIEGLRVVDASVMPTITSGNTNSPTIMIAEKASEMI 529 >ref|YP_003750799.1| choline dehydrogenase [Ralstonia solanacearum PSI07] emb|CBJ49477.1| putative choline dehydrogenase [Ralstonia solanacearum PSI07] Length = 544 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/530 (67%), Positives = 417/530 (78%), Gaps = 5/530 (0%) Query: 7 YDYIIIGAGTAGCVMANRLSRKTGKKVLLIEAGAKDDYIWIHIPVGYLYCINNPRTDWMF 66 YDYIIIGAG+AGCV+ANRL+ VLL+EAG KDDY WIHIPVGYLYCI NPRTDW++ Sbjct: 4 YDYIIIGAGSAGCVLANRLTLDPEVSVLLLEAGGKDDYHWIHIPVGYLYCIGNPRTDWLY 63 Query: 67 RTEADAGLNGRSLIYPRGKVLGGCSSINGMIYMRGQARDYDQWADVTGDDSWRWQNVLPL 126 RT+A+ GLNGRSL YPRG+VLGGCSSINGMIYMRGQ DYD WA + GDDSW+W VLPL Sbjct: 64 RTQAEPGLNGRSLGYPRGRVLGGCSSINGMIYMRGQREDYDGWAALAGDDSWKWDAVLPL 123 Query: 127 FKKSEDYHLGAGQFHGAGGEWRVEKQRLRWDILDAFRDAAAENGIPKVEDFNCGDNEGCG 186 FK SE++H GA +HGAGGEWRVE QRLRW IL++F +AA + GIP+ EDFN GDN G G Sbjct: 124 FKASENHHGGANAWHGAGGEWRVEPQRLRWQILESFIEAAVQAGIPRTEDFNRGDNFGVG 183 Query: 187 YFDVNQKRGVRWNASKAFLRPAMKDGNLTIMTGSHVSRLRMEQGEQGPVCTGVEFTGGG- 245 YF+VNQKRG+RWN +K FLRPA + NLTI+TG+ V L + G CTGV + GGG Sbjct: 184 YFEVNQKRGIRWNTAKGFLRPASQRPNLTIVTGAQVRALTFD----GRRCTGVTYRGGGQ 239 Query: 246 SAWFAEAKETILCAGAIGSPHILQMSGIADPALLQQHQIPVVHALPGVGENLQDHLQMRM 305 A +E +L AGA+ SP +L++SGI P LQ I V HALPGVGENLQDHLQ+R Sbjct: 240 DDTVAAREEVVLSAGAVNSPQLLELSGIGQPQRLQALGIAVRHALPGVGENLQDHLQLRS 299 Query: 306 VFKVNGAKTLNAMASTLVGKMQIGLQYLFTQSGPMSMAPSQLGAFAKSDAQQASANLQYH 365 V KV+G TLN A++ GK IG+QY F QSGPMSMAPSQLGAFA+SD A +++YH Sbjct: 300 VVKVHGVPTLNTRAASWWGKAMIGMQYAFNQSGPMSMAPSQLGAFARSDPSVARPDVEYH 359 Query: 366 VQPLSLEKFGDPLHAFPAFTASVCNLRPTSRGHVRLASGDHALAPRITTNYLSTEEDLKV 425 VQPLSL+KFGDPLHAF AFTASVCNLRPTSRG V +AS D AP I NYLST+ D KV Sbjct: 360 VQPLSLDKFGDPLHAFNAFTASVCNLRPTSRGTVHIASADPFAAPVIAPNYLSTDADRKV 419 Query: 426 AANALRLTRRIAASPALSRYRPEEYKPGAHYETEEDLYRAAGEVGTTIFHPVGTCRMGRS 485 AA +LRLTRRI + PAL++YRPEEY PGA ++T+E L RAAGE+GTTIFHPVGTCRMGR+ Sbjct: 420 AAASLRLTRRIVSQPALAKYRPEEYLPGAAFQTDEALARAAGEIGTTIFHPVGTCRMGRA 479 Query: 486 DDAMAVVDAQGRVRGVGGLSVADASVMPSITSGNTNSPTVMIAEKVASSL 535 DDA AVVDAQ RVRG+ GL V DASVMP+ITSGNTNSPT+MIAEK + + Sbjct: 480 DDAGAVVDAQLRVRGIDGLRVVDASVMPTITSGNTNSPTIMIAEKASEMI 529