BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0517.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002538282.1| Inner membrane protein yfcA, putative [Ricin... 491 e-137 ref|YP_003778160.1| permease [Herbaspirillum seropedicae SmR1] >... 491 e-137 ref|YP_004755050.1| membrane protein [Collimonas fungivorans Ter... 357 1e-96 ref|YP_001101641.1| hypothetical protein HEAR3419 [Herminiimonas... 309 2e-82 ref|ZP_08272540.1| hypothetical protein IMCC9480_1353 [Oxalobact... 306 2e-81 ref|YP_001901083.1| hypothetical protein Rpic_3532 [Ralstonia pi... 287 1e-75 emb|CBJ36345.1| conserved membrane protein of unknown function, ... 286 3e-75 ref|NP_521456.1| hypothetical protein RSc3337 [Ralstonia solanac... 285 5e-75 ref|ZP_07675156.1| integral membrane protein [Ralstonia sp. 5_7_... 283 1e-74 ref|YP_002983145.1| hypothetical protein Rpic12D_3206 [Ralstonia... 283 2e-74 >ref|XP_002538282.1| Inner membrane protein yfcA, putative [Ricinus communis] gb|EEF24101.1| Inner membrane protein yfcA, putative [Ricinus communis] Length = 301 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 253/253 (100%), Positives = 253/253 (100%) Query: 1 VLDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAA 60 VLDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAA Sbjct: 49 VLDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAA 108 Query: 61 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 120 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD Sbjct: 109 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 168 Query: 121 FGTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAK 180 FGTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAK Sbjct: 169 FGTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAK 228 Query: 181 FVNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVG 240 FVNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVG Sbjct: 229 FVNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVG 288 Query: 241 VLILKSGYDAFLR 253 VLILKSGYDAFLR Sbjct: 289 VLILKSGYDAFLR 301 >ref|YP_003778160.1| permease [Herbaspirillum seropedicae SmR1] gb|ADJ66252.1| permease protein [Herbaspirillum seropedicae SmR1] Length = 303 Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust. Identities = 253/253 (100%), Positives = 253/253 (100%) Query: 1 VLDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAA 60 VLDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAA Sbjct: 51 VLDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAA 110 Query: 61 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 120 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD Sbjct: 111 INFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKD 170 Query: 121 FGTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAK 180 FGTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAK Sbjct: 171 FGTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAK 230 Query: 181 FVNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVG 240 FVNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVG Sbjct: 231 FVNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVG 290 Query: 241 VLILKSGYDAFLR 253 VLILKSGYDAFLR Sbjct: 291 VLILKSGYDAFLR 303 >ref|YP_004755050.1| membrane protein [Collimonas fungivorans Ter331] gb|AEK64227.1| Membrane protein, putative [Collimonas fungivorans Ter331] Length = 267 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 177/251 (70%), Positives = 214/251 (85%) Query: 3 DYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAAIN 62 D+LIL A+FVAGLIDAVVGGGGL+ +P LFS+ P + PAT+ GTNK+ G+ GT AAA+N Sbjct: 17 DFLILALASFVAGLIDAVVGGGGLIQIPALFSMLPNSAPATIFGTNKLAGIFGTGAAAVN 76 Query: 63 FARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDFG 122 FA++V + WS PAA AAF FSF GAY VTHIPT+ IRK+LPF+L+AVA+YT+KKKDFG Sbjct: 77 FAKRVKLAWSAALPAAGAAFLFSFLGAYTVTHIPTEAIRKSLPFILLAVAIYTIKKKDFG 136 Query: 123 TTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAKFV 182 + HAP +GS+E +A LIGG +GFYDGVFGPGTGSFL+FLFVR F +DFL+ASA +K + Sbjct: 137 SIHAPLHTGSKEKLFAVLIGGGIGFYDGVFGPGTGSFLIFLFVRFFGFDFLAASAVSKVI 196 Query: 183 NVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVGVL 242 NVATNLAAL WFGYSGH+IWQLGL+MA+ NV GSLVGT+LA+KHGS FVRKLFL+VV VL Sbjct: 197 NVATNLAALLWFGYSGHIIWQLGLIMAICNVGGSLVGTRLALKHGSGFVRKLFLMVVSVL 256 Query: 243 ILKSGYDAFLR 253 ILK+GYDAFL+ Sbjct: 257 ILKTGYDAFLK 267 >ref|YP_001101641.1| hypothetical protein HEAR3419 [Herminiimonas arsenicoxydans] emb|CAL63520.1| Conserved hypothetical proteine, putative permease [Herminiimonas arsenicoxydans] Length = 254 Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 175/250 (70%), Positives = 201/250 (80%) Query: 3 DYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAAIN 62 DY+IL AAFVAG+IDAVVGGGGL+ +P LFS P PATLLGT+K+ GV GT AAA+ Sbjct: 3 DYVILAAAAFVAGMIDAVVGGGGLIQLPALFSTLPNVAPATLLGTSKLAGVWGTGAAALG 62 Query: 63 FARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDFG 122 FAR+V V+WST PAA+AAFA SF GAY VTHIP D IRK LPF+L+AVA YT KKDFG Sbjct: 63 FARRVRVQWSTAVPAAVAAFALSFAGAYTVTHIPPDFIRKLLPFILVAVAAYTFAKKDFG 122 Query: 123 TTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAKFV 182 + HAP G +E +A L+GG +GFYDG FGPGTGSFLVFLFVR F +DFL ASA AK V Sbjct: 123 SIHAPLHIGGKERAWAILVGGGIGFYDGFFGPGTGSFLVFLFVRFFGFDFLGASAVAKVV 182 Query: 183 NVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVGVL 242 NVA N+AAL WFGYSGH++WQLG LMAV NV GSLVG +LA++HGS FVRKLFLVVV L Sbjct: 183 NVACNIAALLWFGYSGHLLWQLGALMAVCNVLGSLVGIRLALRHGSGFVRKLFLVVVTGL 242 Query: 243 ILKSGYDAFL 252 ILK+GYDAF+ Sbjct: 243 ILKTGYDAFI 252 >ref|ZP_08272540.1| hypothetical protein IMCC9480_1353 [Oxalobacteraceae bacterium IMCC9480] gb|EGF33988.1| hypothetical protein IMCC9480_1353 [Oxalobacteraceae bacterium IMCC9480] Length = 299 Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 165/251 (65%), Positives = 199/251 (79%) Query: 3 DYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAAIN 62 ++ L AAF AG +DAVVGGGGL+ +P LFSVFP PATLLGTNK++G GT AAAI+ Sbjct: 49 EFAFLYVAAFFAGFVDAVVGGGGLIQLPALFSVFPNIAPATLLGTNKLSGFWGTGAAAIS 108 Query: 63 FARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDFG 122 FAR+V + WS PAA+AAF F+F GAY VT IP D IRK LP +LIAVA YTLK+KD G Sbjct: 109 FARRVKIEWSAAVPAAVAAFVFAFAGAYTVTRIPPDFIRKMLPLILIAVAAYTLKRKDMG 168 Query: 123 TTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAKFV 182 +THAP G++E + A +GG+VGFYDG FGPGTGSFLVFLFVRVF +DFL ASA AK V Sbjct: 169 STHAPLHKGAKERWLAIAVGGSVGFYDGFFGPGTGSFLVFLFVRVFGFDFLGASAVAKVV 228 Query: 183 NVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVGVL 242 NVA N++AL WF SGH++WQ+GL MAV NV GSL+G+++A+KHGS FVRKLFL VV +L Sbjct: 229 NVACNISALLWFWKSGHLLWQIGLAMAVCNVLGSLIGSRMAIKHGSGFVRKLFLAVVLLL 288 Query: 243 ILKSGYDAFLR 253 ILK+GYDAF + Sbjct: 289 ILKTGYDAFFK 299 >ref|YP_001901083.1| hypothetical protein Rpic_3532 [Ralstonia pickettii 12J] gb|ACD28651.1| protein of unknown function DUF81 [Ralstonia pickettii 12J] Length = 252 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 145/252 (57%), Positives = 185/252 (73%) Query: 2 LDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAAI 61 +++ +L A F+AGLIDAV GGGGLV +P LFS +P PATL+GTNKV + GT+ AA+ Sbjct: 1 MEFALLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNIAPATLIGTNKVASMSGTATAAV 60 Query: 62 NFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDF 121 + R V + W PA + AF FS GA+ + HIP + +R+ALPFVL + +YT+ KK+ Sbjct: 61 RYGRTVRIYWGATAPAVVTAFMFSLLGAWALMHIPAEPLRRALPFVLAVLLVYTVAKKNL 120 Query: 122 GTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAKF 181 G HAP+L G RE A L G A+GFYDGVFGPGTGSFL+ +FVRVF YDFL ASA+ K Sbjct: 121 GADHAPSLQGWRERATALLAGAAIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI 180 Query: 182 VNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVGV 241 VN+ATN+AAL GHV WQLG++MAV NVAG+ VG+ LA++HGS FVRK+F+VVV Sbjct: 181 VNLATNVAALLLLAAKGHVWWQLGVVMAVANVAGNQVGSHLALRHGSRFVRKVFIVVVLA 240 Query: 242 LILKSGYDAFLR 253 LILK+ YDAF+R Sbjct: 241 LILKTAYDAFIR 252 >emb|CBJ36345.1| conserved membrane protein of unknown function, DUF81 [Ralstonia solanacearum CMR15] Length = 252 Score = 286 bits (731), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 145/252 (57%), Positives = 184/252 (73%) Query: 2 LDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAAI 61 +++++L A F+AGLIDAV GGGGLV +P LFS +P PATL+GTNK+ + GT+ AA Sbjct: 1 MEFVLLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNLAPATLIGTNKLASMSGTATAAA 60 Query: 62 NFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDF 121 + R V + WS PA + AF S GA+ +THIP + +R+ALPFVL+ + +YT+ KKD Sbjct: 61 RYGRTVRIYWSATAPAVVTAFLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYTVAKKDL 120 Query: 122 GTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAKF 181 G HAP+L+G RE A L G +GFYDGVFGPGTGSFL+ +FVRVF YDFL ASA+ K Sbjct: 121 GAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI 180 Query: 182 VNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVGV 241 VN+ATN+AAL GHV WQLGL+MAV NV G+ G+ LA+KHGS FVRK+F+ VV Sbjct: 181 VNLATNVAALLLLASKGHVWWQLGLVMAVANVLGNQAGSHLALKHGSRFVRKVFIAVVLA 240 Query: 242 LILKSGYDAFLR 253 LILK+ YDAFLR Sbjct: 241 LILKTAYDAFLR 252 >ref|NP_521456.1| hypothetical protein RSc3337 [Ralstonia solanacearum GMI1000] emb|CAD17125.1| putative of unknown function duf81; transmembrane protein [Ralstonia solanacearum GMI1000] Length = 252 Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 145/252 (57%), Positives = 183/252 (72%) Query: 2 LDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAAI 61 +D+++L A F+AGLIDAV GGGGLV +P LFS +P PATL+GTNK+ + GT+ AA Sbjct: 1 MDFVLLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNLAPATLIGTNKLASMSGTATAAA 60 Query: 62 NFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDF 121 + R V + W PA + AF S GA+ +THIP + +R+ALPFVL+ + +YT+ KKD Sbjct: 61 RYGRTVRIYWGATAPAVVTAFLCSLLGAWALTHIPAEPLRRALPFVLVLLLVYTVAKKDL 120 Query: 122 GTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAKF 181 G HAP+L+G RE A L G +GFYDGVFGPGTGSFL+ +FVRVF YDFL ASA+ K Sbjct: 121 GAEHAPSLAGWRERGVALLAGAIIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI 180 Query: 182 VNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVGV 241 VN+ATN+AAL GHV WQLGL+MAV NV G+ G+ LA+KHGS FVRK+F+ VV Sbjct: 181 VNLATNVAALLLLASKGHVWWQLGLVMAVANVLGNQAGSYLALKHGSRFVRKMFIAVVLA 240 Query: 242 LILKSGYDAFLR 253 LILK+ YDAFLR Sbjct: 241 LILKTAYDAFLR 252 >ref|ZP_07675156.1| integral membrane protein [Ralstonia sp. 5_7_47FAA] gb|EFP66446.1| integral membrane protein [Ralstonia sp. 5_7_47FAA] Length = 252 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 147/252 (58%), Positives = 187/252 (74%) Query: 2 LDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAAI 61 +++ +L A F+AGLIDAV GGGGLV +P LFS +P PATL+GTNKV + GT+ AA+ Sbjct: 1 MEFALLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNIAPATLIGTNKVASMSGTATAAV 60 Query: 62 NFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDF 121 + R V + W PA + AF FS GA+ +THIP + +R+ALPFVL + +YT+ KK+ Sbjct: 61 RYGRTVRIYWGATAPAVVTAFVFSLLGAWALTHIPAEPLRRALPFVLAVLLVYTVAKKNL 120 Query: 122 GTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAKF 181 G HAP+L G RE+ A L G A+GFYDGVFGPGTGSFL+ +FVRVF YDFL ASA+ K Sbjct: 121 GADHAPSLKGWRELAAALLAGAAIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI 180 Query: 182 VNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVGV 241 VN+ATN+AAL GHV WQLGL+MAV NVAG+ VG+ LA++HGS FVRK+F+VVV Sbjct: 181 VNLATNVAALLLLAAKGHVWWQLGLVMAVANVAGNQVGSHLALRHGSRFVRKVFIVVVLA 240 Query: 242 LILKSGYDAFLR 253 LILK+ YDAF+R Sbjct: 241 LILKTAYDAFIR 252 >ref|YP_002983145.1| hypothetical protein Rpic12D_3206 [Ralstonia pickettii 12D] gb|ACS64473.1| protein of unknown function DUF81 [Ralstonia pickettii 12D] Length = 252 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 147/252 (58%), Positives = 186/252 (73%) Query: 2 LDYLILCGAAFVAGLIDAVVGGGGLVLVPTLFSVFPTTTPATLLGTNKVTGVMGTSAAAI 61 +++ +L A F+AGLIDAV GGGGLV +P LFS +P PATL+GTNKV + GT+ AA+ Sbjct: 1 MEFALLAVAGFLAGLIDAVAGGGGLVQIPALFSAYPNIVPATLIGTNKVASMSGTATAAV 60 Query: 62 NFARKVAVRWSTVTPAAMAAFAFSFFGAYVVTHIPTDLIRKALPFVLIAVALYTLKKKDF 121 + R V + W PA + AF FS GA+ +THIP + +R+ALPFVL + +YT+ KK+ Sbjct: 61 RYGRTVRIYWGATAPAVVTAFMFSLLGAWALTHIPAEPLRRALPFVLAVLLVYTVAKKNL 120 Query: 122 GTTHAPTLSGSREIFYAALIGGAVGFYDGVFGPGTGSFLVFLFVRVFSYDFLSASAAAKF 181 G HAP+L G RE A L G A+GFYDGVFGPGTGSFL+ +FVRVF YDFL ASA+ K Sbjct: 121 GADHAPSLKGWRERAAALLAGAAIGFYDGVFGPGTGSFLMIVFVRVFGYDFLHASASTKI 180 Query: 182 VNVATNLAALCWFGYSGHVIWQLGLLMAVFNVAGSLVGTKLAMKHGSVFVRKLFLVVVGV 241 VN+ATN+AAL GHV WQLGL+MAV NVAG+ VG+ LA++HGS FVRK+F+VVV Sbjct: 181 VNLATNVAALLLLAAKGHVWWQLGLVMAVANVAGNQVGSHLALRHGSRFVRKVFIVVVLA 240 Query: 242 LILKSGYDAFLR 253 LILK+ YDAF+R Sbjct: 241 LILKTAYDAFIR 252