BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0458.p (184 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777266.1| signal peptide protein [Herbaspirillum serop... 374 e-102 ref|YP_004754650.1| hypothetical protein CFU_4005 [Collimonas fu... 213 1e-53 gb|EEC66864.1| hypothetical protein OsI_33362 [Oryza sativa Indi... 212 2e-53 ref|ZP_04579537.1| conserved hypothetical protein [Oxalobacter f... 178 3e-43 ref|ZP_04577383.1| conserved hypothetical protein [Oxalobacter f... 159 2e-37 ref|ZP_08272548.1| Lipid A 3-O-deacylase [Oxalobacteraceae bacte... 155 3e-36 ref|YP_298011.1| hypothetical protein Reut_B3809 [Ralstonia eutr... 113 1e-23 ref|YP_544958.1| hypothetical protein Mfla_0849 [Methylobacillus... 107 7e-22 ref|YP_004473002.1| Lipid A 3-O-deacylase-related protein [Pseud... 102 3e-20 gb|EFW81755.1| hypothetical protein PsgB076_04803 [Pseudomonas s... 99 3e-19 >ref|YP_003777266.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ65358.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 184 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MTKLKSLVAKIAFAGVAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQ 60 MTKLKSLVAKIAFAGVAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQ Sbjct: 1 MTKLKSLVAKIAFAGVAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQ 60 Query: 61 SNGTHIGGYWDLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHL 120 SNGTHIGGYWDLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHL Sbjct: 61 SNGTHIGGYWDLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHL 120 Query: 121 FSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARV 180 FSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARV Sbjct: 121 FSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARV 180 Query: 181 AYKF 184 AYKF Sbjct: 181 AYKF 184 >ref|YP_004754650.1| hypothetical protein CFU_4005 [Collimonas fungivorans Ter331] gb|AAT42436.1| hypothetical protein [Collimonas fungivorans Ter331] gb|AEK63827.1| hypothetical protein CFU_4005 [Collimonas fungivorans Ter331] Length = 182 Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 105/165 (63%), Positives = 121/165 (73%), Gaps = 3/165 (1%) Query: 21 VQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQSNGTHIGGYWDLSLANWRMN 80 V S S+A+D S E GTGN +QL R+ AQ+NW N WQ + T +GGYWDLSLA +R N Sbjct: 20 VHSTSFAVDSASFELGTGNKSQLARVAAQWNW--NTALWQGSSTQLGGYWDLSLAEFRQN 77 Query: 81 HYNN-TNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQFG 139 Y N NL D+G TPV RFQ +D KG YGEAGIGVHL S LY NN + STAF+FG Sbjct: 78 QYQNIPGQKKNLTDIGFTPVFRFQANDKKGLYGEAGIGVHLMSHLYDNNSRRFSTAFEFG 137 Query: 140 DHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 184 DHIG GYVFSNGLD+G++LQHFSNGGIK+PN G NFAV RVAY F Sbjct: 138 DHIGTGYVFSNGLDIGLKLQHFSNGGIKKPNSGANFAVLRVAYPF 182 >gb|EEC66864.1| hypothetical protein OsI_33362 [Oryza sativa Indica Group] Length = 106 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 103/106 (97%), Positives = 104/106 (98%) Query: 79 MNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQF 138 MNHYN TNDS NLVDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQF Sbjct: 1 MNHYNKTNDSANLVDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQF 60 Query: 139 GDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 184 GDH+GAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF Sbjct: 61 GDHVGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 106 >ref|ZP_04579537.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gb|EEO30510.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 179 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 91/174 (52%), Positives = 115/174 (66%), Gaps = 6/174 (3%) Query: 11 IAFAGVAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQSNGTHIGGYW 70 IA G AAI P++A+DG S E G G QL R+G Q++W W Q+ G H+ GYW Sbjct: 12 IAVLGFAAI----PAHAVDGTSFEVGMGEHVQLYRVGLQWDWNKKW--LQTGGMHLNGYW 65 Query: 71 DLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDK 130 DL+L W + Y + N S N+ +G+TPV R++ D+ KG Y E GIG LFSK Y NN Sbjct: 66 DLNLGYWHGDRYEDRNASQNIGVIGITPVFRWENDNKKGIYVEGGIGASLFSKTYNNNGN 125 Query: 131 VLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 184 +STAF+F DHIG GYVF+N DLG+RLQH+SN GIK+PN G NF V R AY+F Sbjct: 126 RMSTAFEFADHIGVGYVFNNNFDLGLRLQHYSNAGIKKPNSGENFVVLRGAYRF 179 >ref|ZP_04577383.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28345.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 177 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 79/178 (44%), Positives = 113/178 (63%), Gaps = 1/178 (0%) Query: 7 LVAKIAFAGVAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQSNGTHI 66 + + + + + A Q+ + +DG+S E G G QL R+G Q++W +W F + G H+ Sbjct: 1 MASLVFLSAPSQAADQNTNSFVDGVSFEVGVGEHVQLARVGFQWDWNKDW-FRTAGGWHL 59 Query: 67 GGYWDLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYR 126 GYWDL+L W YN+ +++ N+ +G+TPV R++ KG Y EAGIG LFS+ Y Sbjct: 60 NGYWDLNLGWWHGTRYNDEHETQNIGVIGITPVFRWENASKKGAYVEAGIGASLFSENYN 119 Query: 127 NNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 184 NN + T+F+F DHIG GYVF N DLG+R+QH+SN GI +PN G NF V R AY+F Sbjct: 120 NNGNKMGTSFEFADHIGVGYVFRNNFDLGLRVQHYSNAGISKPNDGENFIVLRGAYRF 177 >ref|ZP_08272548.1| Lipid A 3-O-deacylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33973.1| Lipid A 3-O-deacylase [Oxalobacteraceae bacterium IMCC9480] Length = 181 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/184 (46%), Positives = 114/184 (61%), Gaps = 8/184 (4%) Query: 2 TKLKSLVAKIAFAGVAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQS 61 T LK+LV A S + A+D +S E GTGN +QL R+G Q+N +W +S Sbjct: 5 TSLKALVIACVLC-----AASSSALAVDSVSAEVGTGNKSQLYRVGLQWNMDQSWM--RS 57 Query: 62 NGTHIGGYWDLSLANWRMNHYNN-TNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHL 120 + + I GYWDL+ A WR N + N + + D+G TP LR+Q + +G Y EAG+G HL Sbjct: 58 DKSEIWGYWDLTGAVWRGNQFENRPGATQSFGDIGFTPTLRWQGLNHQGVYAEAGLGPHL 117 Query: 121 FSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARV 180 S++Y N + LS QFG H+G GY +GLDL +R+ HFSNGGIKQPN GVN +ARV Sbjct: 118 NSEVYDNFGRRLSGHLQFGTHLGLGYTTVSGLDLSMRVTHFSNGGIKQPNNGVNLVLARV 177 Query: 181 AYKF 184 YKF Sbjct: 178 GYKF 181 >ref|YP_298011.1| hypothetical protein Reut_B3809 [Ralstonia eutropha JMP134] gb|AAZ63167.1| hypothetical protein Reut_B3809 [Ralstonia eutropha JMP134] Length = 236 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 8/184 (4%) Query: 5 KSLVAKIAFAG--VAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQSN 62 +S++A IA +G ++ + P + + + G G + RL A+ W + W ++ Sbjct: 57 RSVLAAIALSGALISGLLHAEPWFEPVRLGVSAGAGKDAAMARLEAR--WDLKQDLWATS 114 Query: 63 GTHIGGYWDLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHLFS 122 + L ++ N + + ++ L DLGLTP+LR Q G + EAG+GVH+ S Sbjct: 115 SQSVRLRLGLEVSGGVWNPHGSGGNA--LGDLGLTPILRLQGAGRSGVFVEAGVGVHVLS 172 Query: 123 KLYRNNDKVLSTAFQFGDHIGAGYVFSNGLD--LGIRLQHFSNGGIKQPNGGVNFAVARV 180 + ++DKV STAFQFGD + GY F + LD L +RLQH+SN GIK+PN G+NF + + Sbjct: 173 RTRLSDDKVFSTAFQFGDRVAVGYRFGDTLDSELALRLQHYSNAGIKEPNPGINFVLLQY 232 Query: 181 AYKF 184 + +F Sbjct: 233 SARF 236 >ref|YP_544958.1| hypothetical protein Mfla_0849 [Methylobacillus flagellatus KT] ref|YP_545102.1| hypothetical protein Mfla_0993 [Methylobacillus flagellatus KT] gb|ABE49117.1| hypothetical protein Mfla_0849 [Methylobacillus flagellatus KT] gb|ABE49261.1| hypothetical protein Mfla_0993 [Methylobacillus flagellatus KT] Length = 177 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 10/182 (5%) Query: 8 VAKIAFAGVAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQSNGTHIG 67 + KIAFA +A + + + A+DG++ G G +V + ++WG W + H+G Sbjct: 1 MKKIAFALLACCTLNNTANAVDGIAFTGGHGPDANMVAVSLTWDWGKRW--FTEGDWHLG 58 Query: 68 GYWDLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGF---YGEAGIGVHLFSKL 124 GYW+L+ A W+ + + L +G+ PV R QR G+ Y EAGIG + FS Sbjct: 59 GYWELTGAAWKGD---GPSPEKELYAIGIAPVFRLQRFTPSGWLNPYAEAGIGAYQFSGR 115 Query: 125 YRNNDKVLSTAFQFGDHIGAGYVFSNG--LDLGIRLQHFSNGGIKQPNGGVNFAVARVAY 182 + + T F+FG H+G G F + DL R QHFSN GI N GVNF R Y Sbjct: 116 RVHGSLSMGTRFEFGSHVGLGVTFGDQQQYDLSYRFQHFSNAGITSENPGVNFNEIRFGY 175 Query: 183 KF 184 F Sbjct: 176 HF 177 >ref|YP_004473002.1| Lipid A 3-O-deacylase-related protein [Pseudomonas fulva 12-X] gb|AEF20908.1| Lipid A 3-O-deacylase-related protein [Pseudomonas fulva 12-X] Length = 172 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 16/176 (9%) Query: 1 MTKLKSLVAKIAFAGVAAIAVQSPSYAIDGMSLEYG-TGNSTQLVRLGAQFNWGPNWNFW 59 M KL L A +A + + AVQ+ G+S+ G TG+ST + RLGAQF++ W + Sbjct: 1 MKKLVGLAAAVALSLGSVTAVQAA-----GLSVSVGQTGDSTMVYRLGAQFDFNSRW--F 53 Query: 60 QSNGTHIGGYWDLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQ-RDDGKGFYGEAGIGV 118 +S+ H+GGYWD W+ +D+ + PV ++ Y EAGIGV Sbjct: 54 ESSVGHLGGYWDAGYTYWQ------GDDTATNHSISFAPVFVYEFAGQNVKPYLEAGIGV 107 Query: 119 HLFSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVN 174 FS R L ++FQF D IGAG F+ G ++GIR H+SN GIKQPN GV Sbjct: 108 AAFSST-RLESNDLGSSFQFEDRIGAGLRFAGGHEVGIRAMHYSNAGIKQPNDGVE 162 >gb|EFW81755.1| hypothetical protein PsgB076_04803 [Pseudomonas syringae pv. glycinea str. B076] gb|EFW83401.1| hypothetical protein PsgRace4_26666 [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH16027.1| hypothetical protein Pgy4_23336 [Pseudomonas syringae pv. glycinea str. race 4] Length = 172 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 11/160 (6%) Query: 17 AAIAVQSPSYAIDGMSLEYG-TGNSTQLVRLGAQFNWGPNWNFWQSNGTHIGGYWDLSLA 75 AA+A Q+ DG+ G TG ST RLG QF+W W QS+ + GYWD + Sbjct: 12 AALAGQASMAQADGVEFSVGQTGESTMTYRLGVQFDWDKTW--LQSDIGRLTGYWDGAYT 69 Query: 76 NWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGK-GFYGEAGIGVHLFSKLYRNNDKVLST 134 W Y + + L +PVL ++ +G Y EAGIGV +FS + D+ S+ Sbjct: 70 YWDGKDYKDNHS------LSFSPVLVYEFGNGNVKPYVEAGIGVSVFSNT-QVEDRKFSS 122 Query: 135 AFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVN 174 AF F D IG G F+ G ++GIR H+SN GIK+PN G+ Sbjct: 123 AFNFEDRIGFGLRFAGGHEVGIRATHYSNAGIKEPNDGIE 162