BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0425.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778079.1| hypothetical protein Hsero_4705 [Herbaspiril... 389 e-106 ref|YP_983789.1| hypothetical protein Pnap_3572 [Polaromonas nap... 240 9e-62 ref|ZP_08274218.1| hypothetical protein IMCC9480_2620 [Oxalobact... 219 2e-55 ref|YP_001888374.1| hypothetical protein Bphyt_4633 [Burkholderi... 209 3e-52 ref|YP_001862675.1| hypothetical protein Bphy_6601 [Burkholderia... 196 2e-48 ref|YP_548489.1| hypothetical protein Bpro_1655 [Polaromonas sp.... 194 6e-48 ref|ZP_06839347.1| conserved hypothetical protein [Burkholderia ... 191 7e-47 ref|YP_554387.1| hypothetical protein Bxe_B0917 [Burkholderia xe... 190 1e-46 ref|ZP_03263965.1| conserved hypothetical protein [Burkholderia ... 185 4e-45 ref|YP_004235105.1| oxidoreductase molybdopterin-binding protein... 182 2e-44 >ref|YP_003778079.1| hypothetical protein Hsero_4705 [Herbaspirillum seropedicae SmR1] gb|ADJ66171.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 197 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 196/197 (99%), Positives = 196/197 (99%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADKKAGASAGPVLLTITGDIGKANRGALDPALDQMM 60 MQKRKFLSLGASLLAAPVALPALAADKKAGASAGPVLLTITGDIGKANRGALDPALDQMM Sbjct: 1 MQKRKFLSLGASLLAAPVALPALAADKKAGASAGPVLLTITGDIGKANRGALDPALDQMM 60 Query: 61 AKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAVAAPAALENC 120 AKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAV APAALENC Sbjct: 61 AKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAVGAPAALENC 120 Query: 121 ALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARALPE 180 ALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARALPE Sbjct: 121 ALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARALPE 180 Query: 181 RFGQCPWGLYHIAVRKA 197 RFGQCPWGLYHIAVRKA Sbjct: 181 RFGQCPWGLYHIAVRKA 197 >ref|YP_983789.1| hypothetical protein Pnap_3572 [Polaromonas naphthalenivorans CJ2] gb|ABM38868.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] Length = 196 Score = 240 bits (612), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 124/198 (62%), Positives = 147/198 (74%), Gaps = 5/198 (2%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADKKAG-ASAGPVLLTITGDIGKANRGALDPALDQM 59 M+KR FL+ + LA VA+P+ AA + + A AGP LLT++G IG NRG LDPALDQM Sbjct: 1 MKKRHFLN---ASLAGAVAMPSWAAAQGSRRAPAGPTLLTVSGRIGAGNRGPLDPALDQM 57 Query: 60 MAKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAVAAPAALEN 119 MAKQK+ FDKA FDFAA+ ALP+V IQPTLEYDG+ H L+GPLL +V++A A + Sbjct: 58 MAKQKIMFDKAQVFDFAAITALPAVTIQPTLEYDGKPHSLKGPLLLDVMKACGVKAGDKT 117 Query: 120 CA-LRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARAL 178 LRAVDGYA VS AD KYRFI+ATHLDG+P+ LGGLGPLW VYDAD FPDMAA+ L Sbjct: 118 MLFLRAVDGYAAQVSAADAGKYRFIVATHLDGQPMALGGLGPLWGVYDADRFPDMAAKPL 177 Query: 179 PERFGQCPWGLYHIAVRK 196 P RF CPW YHI VR+ Sbjct: 178 PARFANCPWATYHIEVRE 195 >ref|ZP_08274218.1| hypothetical protein IMCC9480_2620 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32306.1| hypothetical protein IMCC9480_2620 [Oxalobacteraceae bacterium IMCC9480] Length = 195 Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 108/164 (65%), Positives = 125/164 (76%), Gaps = 1/164 (0%) Query: 33 AGPVLLTITGDIGKANRGALDPALDQMMAKQKLSFDKAYTFDFAALAALPSVEIQPTLEY 92 AGP LLT+TG IG NRG LDPALDQ+M KQ L+F +AYTFD+AAL ALP++ I PTLEY Sbjct: 31 AGPTLLTVTGLIGPGNRGPLDPALDQLMKKQGLAFTRAYTFDYAALRALPAMTISPTLEY 90 Query: 93 DGRRHRLRGPLLSEVLRAVAAPAALE-NCALRAVDGYAVLVSPADIAKYRFIIATHLDGK 151 DG+ H L GPLLS+VL+A A + LRA+DGY V V D+ KYRFI+AT LDGK Sbjct: 91 DGKVHALGGPLLSDVLKAAGATTGRQGKVLLRAIDGYVVAVPIVDMQKYRFIVATMLDGK 150 Query: 152 PIPLGGLGPLWAVYDADSFPDMAARALPERFGQCPWGLYHIAVR 195 +PLGGLGPLWAVYDAD FPDMAAR + ERF CPW LYHI V+ Sbjct: 151 SMPLGGLGPLWAVYDADRFPDMAARPVTERFTLCPWALYHIEVQ 194 >ref|YP_001888374.1| hypothetical protein Bphyt_4633 [Burkholderia phytofirmans PsJN] gb|ACD19004.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 198 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 103/200 (51%), Positives = 139/200 (69%), Gaps = 5/200 (2%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADK--KAGASAGPVLLTITGDIGKANRGALDPALDQ 58 M KR FL+ A+LL A PA + + K +A PV+LTITG I + NRGALDPA DQ Sbjct: 1 MNKRNFLT-SAALLGV-TAAPAFGSQRVRKEACAASPVVLTITGAIKRHNRGALDPAFDQ 58 Query: 59 MMAKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAVAAPAA-L 117 ++AK ++ F +AY DFA+LA +P+V I+PT EYD R+H L GPLL+ VL V AP+A Sbjct: 59 LLAKHQVKFSEAYAVDFASLAGMPAVTIRPTTEYDSRQHTLSGPLLTHVLEHVGAPSAGS 118 Query: 118 ENCALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARA 177 + AVDGYAV + + Y+FI+AT +DGKP+PLGG+GPLWA YDAD+ P+++++ Sbjct: 119 TQIVMHAVDGYAVATTLDKVRAYQFIVATQMDGKPLPLGGVGPLWATYDADNIPELSSKP 178 Query: 178 LPERFGQCPWGLYHIAVRKA 197 L +RF PWGLYH+ V +A Sbjct: 179 LKDRFELSPWGLYHLQVTEA 198 >ref|YP_001862675.1| hypothetical protein Bphy_6601 [Burkholderia phymatum STM815] gb|ACC75629.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 198 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 100/200 (50%), Positives = 135/200 (67%), Gaps = 5/200 (2%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADKKAGASAGPV--LLTITGDIGKANRGALDPALDQ 58 M KR+FL+ A L A+ PA A A+ +LT++G + NRG LDPA D Sbjct: 1 MNKRQFLTRAAVLGAS--VTPAFGAGNAKPAACAAAPAILTVSGAVKHTNRGPLDPAFDP 58 Query: 59 MMAKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAVAAPAALE 118 +M KQ + F A TFD+ ++A+LP+V I+PT+EYD ++H L GPLL+ VL P A + Sbjct: 59 LMTKQLVKFASARTFDYPSIASLPAVTIKPTVEYDAKQHTLSGPLLANVLEKAGVPGAGD 118 Query: 119 N-CALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARA 177 +LRAVDGYAVL + +I +RFI+AT +DGKP+PLGGLGPLWA+YDAD+ P++AA+ Sbjct: 119 TKVSLRAVDGYAVLTTLDNIRAWRFIVATQMDGKPMPLGGLGPLWAIYDADNIPELAAKP 178 Query: 178 LPERFGQCPWGLYHIAVRKA 197 L +RF CPWGLY I V +A Sbjct: 179 LKDRFVLCPWGLYQIQVSEA 198 >ref|YP_548489.1| hypothetical protein Bpro_1655 [Polaromonas sp. JS666] gb|ABE43591.1| conserved hypothetical protein [Polaromonas sp. JS666] Length = 195 Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 107/200 (53%), Positives = 130/200 (65%), Gaps = 8/200 (4%) Query: 1 MQKRKFLSLGASLLAAP-VALPALAADKKAGASAGPVLLTITGDIGKANRGALDPALDQM 59 M KR FL++ A+ P + PALA A++GP LLT+ G I K NRG LD ALDQM Sbjct: 1 MNKRNFLAVAAAAGILPATSAPALAKT----ATSGPALLTVAGAIKKGNRGPLDAALDQM 56 Query: 60 MAKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRA--VAAPAAL 117 MAK + F +A+T D AAL LPS+ I+PTLEYD + H L GPLL+ VL A V AAL Sbjct: 57 MAKHGVKFSEAFTLDTAALQRLPSITIKPTLEYDNKVHTLTGPLLTTVLNAAGVKTDAAL 116 Query: 118 ENCALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARA 177 LRAVDGY V ++ AD YR ++ATH+DGKP+ LGGLGP WAVYDAD+ + Sbjct: 117 R-LGLRAVDGYNVNITLADAKTYRMMVATHMDGKPLALGGLGPQWAVYDADTLAAFKDKP 175 Query: 178 LPERFGQCPWGLYHIAVRKA 197 + ERF CPWGLY I V A Sbjct: 176 VKERFALCPWGLYFIDVSPA 195 >ref|ZP_06839347.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG72888.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 200 Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 89/172 (51%), Positives = 119/172 (69%), Gaps = 1/172 (0%) Query: 27 KKAGASAGPVLLTITGDIGKANRGALDPALDQMMAKQKLSFDKAYTFDFAALAALPSVEI 86 +K +A PV+LTI+G I + NRGALDPA DQ++AK ++ F +AY D +A +P+V I Sbjct: 29 RKQACAASPVVLTISGAIRRHNRGALDPAFDQLLAKHQVKFSEAYGLDVPFIAGMPAVTI 88 Query: 87 QPTLEYDGRRHRLRGPLLSEVLRAVAAPAA-LENCALRAVDGYAVLVSPADIAKYRFIIA 145 +PT EYD R H L GPLL+ VL V AP A + AVDGYAV + + Y+FI+A Sbjct: 89 KPTTEYDSRPHALSGPLLTNVLEHVGAPTAGSTQIVMHAVDGYAVATTLDKVRAYKFIVA 148 Query: 146 THLDGKPIPLGGLGPLWAVYDADSFPDMAARALPERFGQCPWGLYHIAVRKA 197 TH+DGKP+PLGG+GPLWA YDAD+ P+++ + L +RF PWGLYH+ V A Sbjct: 149 THMDGKPLPLGGVGPLWATYDADNIPELSGKPLKDRFELSPWGLYHLQVTGA 200 >ref|YP_554387.1| hypothetical protein Bxe_B0917 [Burkholderia xenovorans LB400] gb|ABE35037.1| hypothetical protein Bxe_B0917 [Burkholderia xenovorans LB400] Length = 200 Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 88/172 (51%), Positives = 119/172 (69%), Gaps = 1/172 (0%) Query: 27 KKAGASAGPVLLTITGDIGKANRGALDPALDQMMAKQKLSFDKAYTFDFAALAALPSVEI 86 + +A PV+LTI+G I + NRGALDPA DQ++A+ ++ F +AY DF +A +P+V I Sbjct: 29 HRQACAASPVVLTISGAIRRHNRGALDPAFDQLLARHQVKFSEAYGLDFPLIAGMPAVTI 88 Query: 87 QPTLEYDGRRHRLRGPLLSEVLRAVAAPAA-LENCALRAVDGYAVLVSPADIAKYRFIIA 145 +PT EYD R H L GPLL VL V AP A + AVDGYAV + + Y+FI+A Sbjct: 89 KPTTEYDARPHSLSGPLLINVLEHVGAPTAGSTQIVMHAVDGYAVATTLDKVRAYQFIVA 148 Query: 146 THLDGKPIPLGGLGPLWAVYDADSFPDMAARALPERFGQCPWGLYHIAVRKA 197 TH+DGKP+PLGG+GPLWA YDAD+ P+++ + L +RF PWGLYH+ V +A Sbjct: 149 THMDGKPLPLGGVGPLWATYDADTIPELSGKPLKDRFELSPWGLYHLRVSEA 200 >ref|ZP_03263965.1| conserved hypothetical protein [Burkholderia sp. H160] gb|EEA04339.1| conserved hypothetical protein [Burkholderia sp. H160] Length = 198 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 94/198 (47%), Positives = 132/198 (66%), Gaps = 2/198 (1%) Query: 1 MQKRKFLSLGASLLAAPVALPALAADKKAGASAGPVLLTITGDIGKANRGALDPALDQMM 60 M KR+FL+ A+ L A A A ++A + PV+LTI+G I +NRGAL+PA DQ++ Sbjct: 1 MNKRQFLT-SAAALGAAAAPAFGAKRERAECAPSPVVLTISGAIKHSNRGALNPAFDQLL 59 Query: 61 AKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAVAAPAALEN- 119 AK ++ F +AY D LA++ +V I PT+EYD H GPLL++VL V AP A + Sbjct: 60 AKHQVKFSQAYGVDLPLLASMKTVTIHPTIEYDSHLHTFSGPLLTDVLAHVGAPDAGDTQ 119 Query: 120 CALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARALP 179 + AVDGYAV+ + + YRFI+AT +DGKP+P GG+GPLWA++DAD P++AA+ L Sbjct: 120 LVMHAVDGYAVMTTLDTVRAYRFIVATQMDGKPLPFGGVGPLWAIFDADQIPELAAKPLK 179 Query: 180 ERFGQCPWGLYHIAVRKA 197 +RF PWGLYH+ + A Sbjct: 180 DRFVLSPWGLYHMQLTHA 197 >ref|YP_004235105.1| oxidoreductase molybdopterin-binding protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46538.1| oxidoreductase molybdopterin binding protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 192 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 103/197 (52%), Positives = 124/197 (62%), Gaps = 7/197 (3%) Query: 1 MQKRKFLS-LGASLLAAPVALPALAADKKAGASAGPVLLTITGDIGKANRGALDPALDQM 59 M+KR FL+ LG + + LPA +A A A P LLT+ G I NRGAL+P D + Sbjct: 1 MRKRSFLTHLGLAGM-----LPAGSALAHAPAQPQPALLTVAGAIQHPNRGALNPTADLL 55 Query: 60 MAKQKLSFDKAYTFDFAALAALPSVEIQPTLEYDGRRHRLRGPLLSEVLRAVAAPA-ALE 118 AKQ + F +A +FD AAL LP+V I PTLEYDG+RH L GPLLS VL A AP Sbjct: 56 AAKQGVQFSQARSFDAAALQHLPAVSITPTLEYDGQRHTLEGPLLSTVLAAAGAPTQGSA 115 Query: 119 NCALRAVDGYAVLVSPADIAKYRFIIATHLDGKPIPLGGLGPLWAVYDADSFPDMAARAL 178 LRAVDGY ++ AD +YR I+A +DG P+PLGGLGP WAVYDAD+ P + L Sbjct: 116 TVVLRAVDGYNASLTVADADRYRMIVALRMDGAPLPLGGLGPQWAVYDADNLPQFKDKPL 175 Query: 179 PERFGQCPWGLYHIAVR 195 ERF PWGLY I VR Sbjct: 176 KERFALAPWGLYLIEVR 192