BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0424.p (546 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778078.1| acyl-CoA synthetase/AMP-acid ligase II prote... 1127 0.0 gb|ABK64089.1| putative AMP-dependent synthetase and ligase [Jan... 899 0.0 gb|ABK64012.1| putative AMP-dependent synthetase and ligase [Jan... 895 0.0 ref|YP_002007715.1| acyl-CoA synthetase [Cupriavidus taiwanensis... 890 0.0 ref|YP_298505.1| acyl-CoA synthetase [Ralstonia eutropha JMP134]... 889 0.0 ref|YP_840669.1| acyl-CoA synthetase [Ralstonia eutropha H16] >g... 887 0.0 ref|YP_587896.1| acyl-CoA synthetase [Cupriavidus metallidurans ... 885 0.0 ref|YP_004681305.1| acyl-CoA synthetase [Cupriavidus necator N-1... 885 0.0 ref|YP_002980003.1| acyl-CoA synthetase [Ralstonia pickettii 12D... 880 0.0 ref|YP_001897621.1| acyl-CoA synthetase [Ralstonia pickettii 12J... 874 0.0 >ref|YP_003778078.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum seropedicae SmR1] gb|ADJ66170.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II protein [Herbaspirillum seropedicae SmR1] Length = 546 Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/546 (99%), Positives = 546/546 (100%) Query: 1 MADFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASAL 60 MADFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASAL Sbjct: 1 MADFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASAL 60 Query: 61 QGLGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLL 120 QGLGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLL Sbjct: 61 QGLGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLL 120 Query: 121 IDSEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPA 180 IDSEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPA Sbjct: 121 IDSEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPA 180 Query: 181 DEWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWC 240 DEWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWC Sbjct: 181 DEWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWC 240 Query: 241 FPWTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPV 300 FPWTVAARAGVNVCLRKFEPKLVFDLIAEHG+THYCAAPIVHAALANAPEGWRAGIRGPV Sbjct: 241 FPWTVAARAGVNVCLRKFEPKLVFDLIAEHGITHYCAAPIVHAALANAPEGWRAGIRGPV 300 Query: 301 KAMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSR 360 KAMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSR Sbjct: 301 KAMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSR 360 Query: 361 QGVRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFH 420 QGVRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFH Sbjct: 361 QGVRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFH 420 Query: 421 TGDLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGE 480 TGDLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGE Sbjct: 421 TGDLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGE 480 Query: 481 TPCAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKS 540 TPCAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKS Sbjct: 481 TPCAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKS 540 Query: 541 DSAINV 546 DSAINV Sbjct: 541 DSAINV 546 >gb|ABK64089.1| putative AMP-dependent synthetase and ligase [Janthinobacterium lividum] Length = 544 Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/545 (78%), Positives = 475/545 (87%), Gaps = 3/545 (0%) Query: 2 ADFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQ 61 ADF+TGLG+N+ANYAALTP+D+IARAAAVYG R AI HGA+RQ W +TY RTRRLAS+L Sbjct: 3 ADFNTGLGKNSANYAALTPLDYIARAAAVYGNRLAIAHGAVRQTWQETYARTRRLASSLI 62 Query: 62 GLGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLI 121 LGVG DTV+ MLPNTPAMVEA FGVPMAGAVLNALNIRLD S+ FMLRHG+AKVLL Sbjct: 63 KLGVGTGDTVAVMLPNTPAMVEASFGVPMAGAVLNALNIRLDLASLTFMLRHGQAKVLLA 122 Query: 122 DSEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPAD 181 D+EFA LA+Q+ Q+P L++++V D LGP E F L+YE LLA GD +DWQ PAD Sbjct: 123 DTEFAELARQMAAQIPGLRVIQVNDVLGPEV---EPFAELDYETLLASGDPGYDWQPPAD 179 Query: 182 EWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCF 241 EWDAIALNYTSGTTGDPKGVVYHHRGAALNA+SNILEWD+PKH VYLWTLPMFHCNGWCF Sbjct: 180 EWDAIALNYTSGTTGDPKGVVYHHRGAALNALSNILEWDMPKHAVYLWTLPMFHCNGWCF 239 Query: 242 PWTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVK 301 PWTVAARAGVNVCLRKFEPKLVFDL+ E +THYCAAPIVHAALANAP WR GI V+ Sbjct: 240 PWTVAARAGVNVCLRKFEPKLVFDLMRELRITHYCAAPIVHAALANAPANWRDGIDWTVR 299 Query: 302 AMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQ 361 MVAGAPPPAA++AK+EAM F+L H YGLTEVYGPAA+CAEQDEW LS ++RAV KSRQ Sbjct: 300 GMVAGAPPPAAMVAKIEAMGFDLIHSYGLTEVYGPAAICAEQDEWAALSQEERAVLKSRQ 359 Query: 362 GVRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHT 421 GVRYHLQS V VL P+TM PVAADGE+IGEIMFRGNICMKGYLKN+RAT EAFAGGWFHT Sbjct: 360 GVRYHLQSAVAVLDPETMQPVAADGEQIGEIMFRGNICMKGYLKNERATQEAFAGGWFHT 419 Query: 422 GDLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGET 481 GDLGVM DGYIK+KDRSKDIIISGGENISSVEVED LY HP VLAAAV+AQPDEKWGET Sbjct: 420 GDLGVMYPDGYIKLKDRSKDIIISGGENISSVEVEDALYHHPQVLAAAVIAQPDEKWGET 479 Query: 482 PCAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSD 541 PCAFVEL+EG V AEL FC+++LAGFKVPKAIYFGPLP+TSTGKIQKFELRKRM+SD Sbjct: 480 PCAFVELREGGTVTEAELIAFCKNNLAGFKVPKAIYFGPLPRTSTGKIQKFELRKRMQSD 539 Query: 542 SAINV 546 AI+V Sbjct: 540 KAIDV 544 >gb|ABK64012.1| putative AMP-dependent synthetase and ligase [Janthinobacterium lividum] Length = 578 Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/545 (78%), Positives = 473/545 (86%), Gaps = 3/545 (0%) Query: 2 ADFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQ 61 ADF+TGLG+N+ANYAALTP+D+IARAAAVYG R AI HGA+RQ W TY RTRRLAS L Sbjct: 37 ADFNTGLGKNSANYAALTPLDYIARAAAVYGNRLAIAHGAVRQTWGVTYARTRRLASGLI 96 Query: 62 GLGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLI 121 LGV DTV+ MLPNTPAMVEA FGVPMAGAVLNALNIRLD S+ FMLRHG+AKVLL Sbjct: 97 KLGVSTGDTVAVMLPNTPAMVEASFGVPMAGAVLNALNIRLDLASLTFMLRHGQAKVLLA 156 Query: 122 DSEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPAD 181 D+EFA LA+Q+ Q+P L++++V D LGP A F L+YE+LLA GD +DWQ PAD Sbjct: 157 DTEFAELARQMAAQIPGLRVIQVNDVLGPEVDA---FSDLDYESLLASGDPDYDWQPPAD 213 Query: 182 EWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCF 241 EWDAIALNYTSGTTGDPKGVVYHHRGAALNA+SNILEWD+PKH VYLWTLPMFHCNGWCF Sbjct: 214 EWDAIALNYTSGTTGDPKGVVYHHRGAALNALSNILEWDMPKHAVYLWTLPMFHCNGWCF 273 Query: 242 PWTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVK 301 PWT+AARAGVNVCLRKFEPKLVFDL+ E +THYCAAPIVHAALANAP WR GI V+ Sbjct: 274 PWTIAARAGVNVCLRKFEPKLVFDLMRELRITHYCAAPIVHAALANAPANWRDGIDWTVR 333 Query: 302 AMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQ 361 MVAGAPPPAA++AK+EAM F+L H YGLTEVYGPAA+CAEQDEW LS ++RAV KSRQ Sbjct: 334 GMVAGAPPPAAMVAKIEAMGFDLIHSYGLTEVYGPAAICAEQDEWAALSQEERAVLKSRQ 393 Query: 362 GVRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHT 421 GVRYHLQS V V+ P+TM PVAADGE+IGEIMFRGNICMKGYLKN+RAT EAFAGGWFHT Sbjct: 394 GVRYHLQSAVAVIDPETMQPVAADGEQIGEIMFRGNICMKGYLKNERATQEAFAGGWFHT 453 Query: 422 GDLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGET 481 GDLGVM DGYIK+KDRSKDIIISGGENISSVEVED LY HP VLAAAV+AQPDEKWGET Sbjct: 454 GDLGVMYPDGYIKLKDRSKDIIISGGENISSVEVEDALYHHPQVLAAAVIAQPDEKWGET 513 Query: 482 PCAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSD 541 PCAFVEL+EG V AEL FC+++LAGFKVPKAIYFGPLP+TSTGKIQKFELRKRM+SD Sbjct: 514 PCAFVELREGGTVTEAELIAFCKNNLAGFKVPKAIYFGPLPRTSTGKIQKFELRKRMQSD 573 Query: 542 SAINV 546 AI+V Sbjct: 574 KAIDV 578 >ref|YP_002007715.1| acyl-CoA synthetase [Cupriavidus taiwanensis LMG 19424] emb|CAQ71658.1| putative AMP-dependent synthetase and ligase [Cupriavidus taiwanensis LMG 19424] Length = 557 Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/544 (79%), Positives = 474/544 (87%), Gaps = 3/544 (0%) Query: 3 DFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQG 62 DFD+GL RNAAN+ LTPIDF+ RAA VYG R AI+HG LRQ+W TY R RRLASAL Sbjct: 17 DFDSGLARNAANFVPLTPIDFLVRAAEVYGDRLAIVHGPLRQNWRDTYARARRLASALAR 76 Query: 63 LGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLID 122 GVGK DTV+A+LPNTPAMVEAHFGVPMAGAVLNALNIRLDA +++FMLRHGEA+VLL D Sbjct: 77 AGVGKGDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLLFMLRHGEARVLLAD 136 Query: 123 SEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPADE 182 +EFA LA+Q+ +LP LK++ V D LGP FG +YEA L GGD + WQMPADE Sbjct: 137 TEFADLARQMALELPGLKVIAVHDVLGP---QATPFGDTDYEAFLDGGDPAYAWQMPADE 193 Query: 183 WDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 242 WDAIALNYTSGTTGDPKGVVYHHRGAA+NAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP Sbjct: 194 WDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 253 Query: 243 WTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVKA 302 WTVAARAGVNVCLRKFEP+LVFDL+ E GVTHYCAAPIVH AL NAP WR G+RGPV+ Sbjct: 254 WTVAARAGVNVCLRKFEPRLVFDLMREEGVTHYCAAPIVHTALVNAPTAWREGVRGPVRG 313 Query: 303 MVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQG 362 MVAGAPPPAAVLA+MEAM FELTHVYGLTEVYGPAAVCAEQD+W++LS RAV+K+RQG Sbjct: 314 MVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDDWSSLSEQDRAVKKARQG 373 Query: 363 VRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHTG 422 VRYHLQS V VL PD+M PV ADGE IGEIMFRGNICMKGYLKN++AT EAFAGGWFHTG Sbjct: 374 VRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNICMKGYLKNEKATREAFAGGWFHTG 433 Query: 423 DLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGETP 482 DLGV DGYIKIKDRSKDIIISGGENISSVEVED LYRHPAVLAAAVVAQPD KWGETP Sbjct: 434 DLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVAQPDAKWGETP 493 Query: 483 CAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSDS 542 CAFVELK+GA V A +L CR+ LAGFKVPKA+YFGPLPKTSTGKIQKFELR+++KSDS Sbjct: 494 CAFVELKDGASVSAEDLIAHCRTLLAGFKVPKAVYFGPLPKTSTGKIQKFELRRKVKSDS 553 Query: 543 AINV 546 AI+V Sbjct: 554 AIDV 557 >ref|YP_298505.1| acyl-CoA synthetase [Ralstonia eutropha JMP134] gb|AAZ63661.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134] Length = 544 Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/544 (78%), Positives = 478/544 (87%), Gaps = 3/544 (0%) Query: 3 DFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQG 62 DFD+GLGRNAAN+ +TPIDF+ RAA VYG R AI+HG +RQ+W TY R RRLASAL Sbjct: 4 DFDSGLGRNAANFVPITPIDFLVRAAEVYGDRPAIVHGPVRQNWRDTYVRARRLASALAR 63 Query: 63 LGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLID 122 GVGK DTV+A+LPNTPAMVEAHFGVPMAGAVLNALNIRLDA ++VFMLRHGEA+VLL D Sbjct: 64 AGVGKGDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLRHGEARVLLAD 123 Query: 123 SEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPADE 182 +EFA LA+Q+ ++P LK++ V D LGP ERFG +YE+ LA GD + W+MP DE Sbjct: 124 TEFADLARQMALEIPGLKVIAVEDALGP---QAERFGDTDYESFLASGDPEYAWKMPDDE 180 Query: 183 WDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 242 WDAIALNYTSGTTGDPKGVVYHHRGAA+NA+SNILEWDLPKHPVYLWTLP+FHCNGWCFP Sbjct: 181 WDAIALNYTSGTTGDPKGVVYHHRGAAMNAISNILEWDLPKHPVYLWTLPLFHCNGWCFP 240 Query: 243 WTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVKA 302 WT+AARAGVNVCLRKFEP+LVFDL+ + GVTHYCAAPIVH AL NAP WR G+RGPV+ Sbjct: 241 WTIAARAGVNVCLRKFEPRLVFDLMRDEGVTHYCAAPIVHTALVNAPPSWREGLRGPVRG 300 Query: 303 MVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQG 362 MVAGAPPPAAVLA+MEAM FELTHVYGLTEVYGPAAVCAEQD W++LS ++RAV+K+RQG Sbjct: 301 MVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDGWDSLSQEERAVKKARQG 360 Query: 363 VRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHTG 422 VRYHLQSGV VL PD+M PV ADGE IGEIMFRGNICMKGYLKN++AT EAFAGGWFHTG Sbjct: 361 VRYHLQSGVAVLDPDSMQPVPADGETIGEIMFRGNICMKGYLKNEKATREAFAGGWFHTG 420 Query: 423 DLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGETP 482 DLGV ADGYIKIKDRSKDIIISGGENISSVEVED LYRHPAVLAAAVVAQPD KWGETP Sbjct: 421 DLGVCMADGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVAQPDAKWGETP 480 Query: 483 CAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSDS 542 CAFVELK+GA A EL CR+ LAGFKVPKA+YFGPLPKTSTGKIQKFELR+++KSDS Sbjct: 481 CAFVELKDGASATAEELMAHCRTLLAGFKVPKAVYFGPLPKTSTGKIQKFELRRKVKSDS 540 Query: 543 AINV 546 AI+V Sbjct: 541 AIDV 544 >ref|YP_840669.1| acyl-CoA synthetase [Ralstonia eutropha H16] emb|CAJ95939.1| Acyl-CoA synthetase [Ralstonia eutropha H16] Length = 544 Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/544 (79%), Positives = 474/544 (87%), Gaps = 3/544 (0%) Query: 3 DFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQG 62 DFD+GL RNAAN+ LTPIDF+ RAA VYG+R AI+HG LRQ+W TY R RRLASAL Sbjct: 4 DFDSGLARNAANFVPLTPIDFLVRAAEVYGQRLAIVHGPLRQNWRDTYARARRLASALAR 63 Query: 63 LGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLID 122 G+GK DTV+A+LPNTPAMVEAHFGVPMAGAVLNALNIRLDA ++VFMLRHGEA+VLL D Sbjct: 64 AGIGKGDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLRHGEARVLLAD 123 Query: 123 SEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPADE 182 +EFA LA+Q+ ++P LK++ V D LGP FG +YEA LA GD + W MPADE Sbjct: 124 TEFADLARQMALEIPGLKVIAVHDVLGPQEAP---FGDTDYEAFLASGDSDYAWHMPADE 180 Query: 183 WDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 242 W+AIALNYTSGTTGDPKGVVYHHRGAA+NAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP Sbjct: 181 WEAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 240 Query: 243 WTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVKA 302 WTVAARAGVNVCLRKFEP+LVFDL+ E GVTHYCAAPIVH AL NAP WR G+RGPV+ Sbjct: 241 WTVAARAGVNVCLRKFEPRLVFDLMREEGVTHYCAAPIVHTALVNAPAAWREGVRGPVRG 300 Query: 303 MVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQG 362 MVAGAPPPAAVLA+MEAM FELTHVYGLTEVYGPAAVCAEQD+W+TLS RAV+K+RQG Sbjct: 301 MVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDDWSTLSEQDRAVRKARQG 360 Query: 363 VRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHTG 422 VRYHLQS V VL PD+M PV ADGE IGEIMFRGNICMKGYLKN++AT EAFAGGWFHTG Sbjct: 361 VRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNICMKGYLKNEKATREAFAGGWFHTG 420 Query: 423 DLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGETP 482 DLGV DGYIKIKDRSKDIIISGGENISSVEVED LYRHPAVLAAAVVAQPD +WGETP Sbjct: 421 DLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVAQPDARWGETP 480 Query: 483 CAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSDS 542 CAFVELK+GA V A EL CR+ LAGFKVPKA+YFGPLPKTSTGKIQKFELR+++KSDS Sbjct: 481 CAFVELKDGASVSAEELIAHCRTLLAGFKVPKAVYFGPLPKTSTGKIQKFELRRKVKSDS 540 Query: 543 AINV 546 AI+V Sbjct: 541 AIDV 544 >ref|YP_587896.1| acyl-CoA synthetase [Cupriavidus metallidurans CH34] gb|ABF12627.1| AMP-dependent synthetase and ligase; putative o-succinylbenzoate-CoA ligase [Cupriavidus metallidurans CH34] Length = 544 Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/544 (79%), Positives = 474/544 (87%), Gaps = 3/544 (0%) Query: 3 DFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQG 62 D+DTGL RN ANY +TP+DFIARAA VYG R AI+HG +RQ+W TY R RRLASAL Sbjct: 4 DYDTGLARNPANYVPITPLDFIARAAEVYGDRLAIVHGTVRQNWRDTYARCRRLASALTR 63 Query: 63 LGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLID 122 GVGK DTV+A+LPNTPAMVEAHFGVPMAGAVLNALNIRLDA ++VFMLRHGEAKVLL D Sbjct: 64 AGVGKGDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLRHGEAKVLLAD 123 Query: 123 SEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPADE 182 +EFA A+Q+ ++ LK++ V D LGP ERFG +YE+ LA GD FDW+MP DE Sbjct: 124 TEFADAARQMAREVRGLKVIAVEDVLGPD---AERFGDTDYESFLASGDPEFDWKMPGDE 180 Query: 183 WDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 242 WDAIALNYTSGTTGDPKGVVYHHRGAA+NA+SNILEWD+ KHPVYLWTLPMFHCNGWCFP Sbjct: 181 WDAIALNYTSGTTGDPKGVVYHHRGAAMNAISNILEWDMAKHPVYLWTLPMFHCNGWCFP 240 Query: 243 WTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVKA 302 WTVAARAGVNVCLRKFEPKLVFDL+ + GVTHYCAAPIVH AL NAP WR G+RGPV+ Sbjct: 241 WTVAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHTALVNAPPSWREGLRGPVRG 300 Query: 303 MVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQG 362 MVAGAPPPAAVLA+MEAM F+L+HVYGLTEVYGPAAVCAEQD W+T+S ++RAV K+RQG Sbjct: 301 MVAGAPPPAAVLAQMEAMGFDLSHVYGLTEVYGPAAVCAEQDAWHTVSQEERAVLKARQG 360 Query: 363 VRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHTG 422 VRYHLQSGVTVL PDTM PV DGE IGEIMFRGNICMKGYLKND+AT EAFAGGWFHTG Sbjct: 361 VRYHLQSGVTVLDPDTMQPVPRDGETIGEIMFRGNICMKGYLKNDKATREAFAGGWFHTG 420 Query: 423 DLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGETP 482 DLGV DGYIKIKDRSKDIIISGGENISSVEVED LYRHPAVLAAAVVAQPD KWGETP Sbjct: 421 DLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVAQPDAKWGETP 480 Query: 483 CAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSDS 542 CAFVELK+GA V A EL CR+ LAGFKVPKA+YFGPLPKTSTGKIQKFELRK+M+S++ Sbjct: 481 CAFVELKDGASVTAEELIAHCRTLLAGFKVPKAVYFGPLPKTSTGKIQKFELRKKMQSNA 540 Query: 543 AINV 546 AI+V Sbjct: 541 AIDV 544 >ref|YP_004681305.1| acyl-CoA synthetase [Cupriavidus necator N-1] gb|AEI80073.1| acyl-CoA synthetase [Cupriavidus necator N-1] Length = 544 Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/544 (79%), Positives = 473/544 (86%), Gaps = 3/544 (0%) Query: 3 DFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQG 62 DFD+GL RNAAN+ LTPIDF+ RAA VYG+R AI+HG LRQ+W TY R RRLASAL Sbjct: 4 DFDSGLARNAANFVPLTPIDFLVRAAEVYGERLAIVHGPLRQNWRDTYVRARRLASALAR 63 Query: 63 LGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLID 122 G+GK DTV+A+LPNTPAMVEAHFGVPMAGAVLNALNIRLDA ++VFMLRHGEA+VLL D Sbjct: 64 AGIGKGDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLRHGEARVLLAD 123 Query: 123 SEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPADE 182 +EFA LA+Q+ ++P LK++ V D LGP FG +YEA LA GD + W MPADE Sbjct: 124 TEFADLARQMALEIPGLKVIAVHDVLGPQEAP---FGDTDYEAFLASGDPDYAWHMPADE 180 Query: 183 WDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 242 W+AIALNYTSGTTGDPKGVVYHHRGAA+NAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP Sbjct: 181 WEAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 240 Query: 243 WTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVKA 302 WTVAARAGVNVCLRKFEP+LVFDL+ GVTHYCAAPIVH AL NAP WR G+RGPV+ Sbjct: 241 WTVAARAGVNVCLRKFEPRLVFDLMRAEGVTHYCAAPIVHTALVNAPAAWREGVRGPVRG 300 Query: 303 MVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQG 362 MVAGAPPPAAVLA+MEAM FELTHVYGLTEVYGPAAVCAEQD+W+TLS RAV+K+RQG Sbjct: 301 MVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDDWSTLSEQDRAVKKARQG 360 Query: 363 VRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHTG 422 VRYHLQS V VL PD+M PV ADGE IGEIMFRGNICMKGYLKN++AT EAFAGGWFHTG Sbjct: 361 VRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNICMKGYLKNEKATREAFAGGWFHTG 420 Query: 423 DLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGETP 482 DLGV DGYIKIKDRSKDIIISGGENISSVEVED LYRHPAVLAAAVVAQPD KWGETP Sbjct: 421 DLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVAQPDVKWGETP 480 Query: 483 CAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSDS 542 CAFVELK+GA V A EL CR+ LAGFKVPKA+YFGPLPKTSTGKIQKFELR+++KSDS Sbjct: 481 CAFVELKDGASVSAEELIAHCRTLLAGFKVPKAVYFGPLPKTSTGKIQKFELRRKVKSDS 540 Query: 543 AINV 546 AI+V Sbjct: 541 AIDV 544 >ref|YP_002980003.1| acyl-CoA synthetase [Ralstonia pickettii 12D] gb|ACS61331.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D] Length = 544 Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/544 (78%), Positives = 472/544 (86%), Gaps = 3/544 (0%) Query: 3 DFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQG 62 DFD+GL RNAAN+ LTPI+F+ARAA VYG R AI+HG +RQ+W TY R RRLASAL Sbjct: 4 DFDSGLARNAANFVPLTPIEFLARAADVYGDRLAIVHGPVRQNWRDTYERARRLASALSL 63 Query: 63 LGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLID 122 GVG+ DTV+A+LPNTPAMVEAHFGVPMAG VLNALNIRLDA ++VFMLRHGEA+VLL D Sbjct: 64 AGVGRGDTVAALLPNTPAMVEAHFGVPMAGGVLNALNIRLDAANLVFMLRHGEARVLLAD 123 Query: 123 SEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPADE 182 +EFA LA+Q+ ++P LK++ V D LGP E FG +YE+ LA GD H+DWQMPADE Sbjct: 124 TEFAELARQMALEIPGLKVIAVNDALGP---QAEPFGDTDYESFLASGDPHYDWQMPADE 180 Query: 183 WDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 242 WDAIALNYTSGTTGDPKGVVYHHRGAA+NAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP Sbjct: 181 WDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 240 Query: 243 WTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVKA 302 WT+AARAGVNVCLRKFEPKLVFDL+ + GVTHYCAAPIVH AL NAP WR G+RGPV+ Sbjct: 241 WTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHTALVNAPPSWREGLRGPVRG 300 Query: 303 MVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQG 362 MVAGAPPPAAVLA+MEAM FELTHVYGLTEVYGPAAVCAEQDEW TL RA K+RQG Sbjct: 301 MVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDEWRTLPEHDRATMKARQG 360 Query: 363 VRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHTG 422 VRYHLQS V VL+P+TM PV ADGE IGEIMFRGNICMKGYLKN++AT EAFAGGWFHTG Sbjct: 361 VRYHLQSQVAVLNPETMQPVPADGETIGEIMFRGNICMKGYLKNEKATREAFAGGWFHTG 420 Query: 423 DLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGETP 482 DLGV DGYIKIKDRSKDIIISGGENISSVEVED LYRHPAVLAAAVVAQPD KWGETP Sbjct: 421 DLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVAQPDAKWGETP 480 Query: 483 CAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSDS 542 CAFVELK+GA A +L C++ LAGFKVPKA++FGPLPKTSTGKIQK+ELR+++KS S Sbjct: 481 CAFVELKDGATATAEDLIAHCKTLLAGFKVPKAVFFGPLPKTSTGKIQKYELRRKVKSTS 540 Query: 543 AINV 546 AI+V Sbjct: 541 AIDV 544 >ref|YP_001897621.1| acyl-CoA synthetase [Ralstonia pickettii 12J] ref|ZP_07674914.1| AMP-binding protein [Ralstonia sp. 5_7_47FAA] gb|ACD25189.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12J] gb|EFP66512.1| AMP-binding protein [Ralstonia sp. 5_7_47FAA] Length = 544 Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust. Identities = 424/544 (77%), Positives = 470/544 (86%), Gaps = 3/544 (0%) Query: 3 DFDTGLGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQG 62 DFD+GL RNAAN+ LTPI+F+ARAA VYG R AI+HG +RQ+W TY R RRLASAL Sbjct: 4 DFDSGLARNAANFVPLTPIEFLARAADVYGDRLAIVHGPVRQNWRDTYERARRLASALSL 63 Query: 63 LGVGKNDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLID 122 GVG+ DTV+A+LPNTPAMVEAHFGVPMAG VLNALNIRLDA ++VFMLRHGEA+VLL D Sbjct: 64 AGVGRGDTVAALLPNTPAMVEAHFGVPMAGGVLNALNIRLDAANLVFMLRHGEARVLLAD 123 Query: 123 SEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQMPADE 182 +EFA LA+Q+ ++P LK++ V D LGP E FG +YE LA GD H+ WQ+PADE Sbjct: 124 TEFADLARQMALEIPGLKVIAVNDALGP---QAEPFGDTDYETFLASGDPHYAWQLPADE 180 Query: 183 WDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 242 WDAIALNYTSGTTGDPKGVVYHHRGAA+NAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP Sbjct: 181 WDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLPMFHCNGWCFP 240 Query: 243 WTVAARAGVNVCLRKFEPKLVFDLIAEHGVTHYCAAPIVHAALANAPEGWRAGIRGPVKA 302 WT+AARAGVNVCLRKFEPKLVFDL+ + GVTHYCAAPIVH AL NAP WR G+RGPV+ Sbjct: 241 WTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHTALVNAPPSWREGLRGPVRG 300 Query: 303 MVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQKSRQG 362 MVAGAPPPAAVLA+MEAM FELTHVYGLTEVYGPAAVCAEQDEW TL RA K+RQG Sbjct: 301 MVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDEWRTLPEHDRATMKARQG 360 Query: 363 VRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGGWFHTG 422 VRYHLQS V VL+P+TM PV ADGE IGEIMFRGNICMKGYLKN++AT EAFAGGWFHTG Sbjct: 361 VRYHLQSQVAVLNPETMQPVPADGETIGEIMFRGNICMKGYLKNEKATREAFAGGWFHTG 420 Query: 423 DLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEKWGETP 482 DLGV DGYIKIKDRSKDIIISGGENISSVEVED LYRHPAVLAAAVVAQPD KWGETP Sbjct: 421 DLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVAQPDAKWGETP 480 Query: 483 CAFVELKEGAEVGAAELTEFCRSHLAGFKVPKAIYFGPLPKTSTGKIQKFELRKRMKSDS 542 CAFVELK+GA A +L C++ LAGFKVPKA++FGPLPKTSTGKIQK+ELR+++KS S Sbjct: 481 CAFVELKDGATATAEDLIAHCKTLLAGFKVPKAVFFGPLPKTSTGKIQKYELRRKVKSTS 540 Query: 543 AINV 546 AI+V Sbjct: 541 AIDV 544