BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0418.p (199 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778072.1| two component response regulator protein [He... 410 e-113 ref|YP_002433810.1| response regulator receiver modulated metal ... 200 1e-49 ref|ZP_05111218.1| hypothetical protein LDG_2786 [Legionella dra... 193 1e-47 ref|YP_856303.1| sensory box protein [Aeromonas hydrophila subsp... 192 2e-47 ref|YP_004393012.1| sensory box protein [Aeromonas veronii B565]... 190 1e-46 ref|YP_003828416.1| PAS/PAC sensor protein [Acetohalobium arabat... 187 1e-45 ref|YP_422803.1| response regulator [Magnetospirillum magneticum... 183 1e-44 ref|YP_003554680.1| putative PAS/PAC sensor protein [Aminobacter... 182 3e-44 ref|ZP_00053842.1| COG2206: HD-GYP domain [Magnetospirillum magn... 179 2e-43 ref|YP_002352404.1| metal dependent phosphohydrolase [Dictyoglom... 179 2e-43 >ref|YP_003778072.1| two component response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ66164.1| two component response regulator protein [Herbaspirillum seropedicae SmR1] Length = 199 Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%) Query: 1 MPVSESNKIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMAS 60 MPVSESNKIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMAS Sbjct: 1 MPVSESNKIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMAS 60 Query: 61 QVHDIGKARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYL 120 QVHDIGKARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYL Sbjct: 61 QVHDIGKARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYL 120 Query: 121 DGSGYPRGISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAV 180 DGSGYPRGISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAV Sbjct: 121 DGSGYPRGISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAV 180 Query: 181 VVDACLDVVKRSNWRPISN 199 VVDACLDVVKRSNWRPISN Sbjct: 181 VVDACLDVVKRSNWRPISN 199 >ref|YP_002433810.1| response regulator receiver modulated metal dependent phosphohydrolase [Desulfatibacillum alkenivorans AK-01] gb|ACL06342.1| response regulator receiver modulated metal dependent phosphohydrolase [Desulfatibacillum alkenivorans AK-01] Length = 437 Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 94/187 (50%), Positives = 131/187 (70%) Query: 8 KIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQVHDIGK 67 K + I AM + D YT +H+ + +LAV IG +D++ ++D L MA +HDIGK Sbjct: 246 KAMEGTITAMANTLDIRDPYTADHQRRVVKLAVAIGEEMDISKGKMDGLRMAGVIHDIGK 305 Query: 68 ARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDGSGYPR 127 IPLA+L KPG+I+ E+ ++KTH + GY+IL K+ FP+ +A+IV HHE LDGSGYP+ Sbjct: 306 IAIPLAILNKPGKITDTEFTLIKTHSEVGYDILKKVEFPWPIADIVVQHHERLDGSGYPK 365 Query: 128 GISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVVDACLD 187 G+SGDEI LEA+IL VAD+VE+MS+ RPYR +LGM AL+E+ + G D VVDAC+ Sbjct: 366 GLSGDEILLEAKILAVADVVEAMSSHRPYRPALGMEKALEEVITKKGTIFDPAVVDACVK 425 Query: 188 VVKRSNW 194 V+KR + Sbjct: 426 VIKRKGF 432 >ref|ZP_05111218.1| hypothetical protein LDG_2786 [Legionella drancourtii LLAP12] gb|EET11095.1| hypothetical protein LDG_2786 [Legionella drancourtii LLAP12] Length = 450 Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 91/176 (51%), Positives = 130/176 (73%) Query: 10 YQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQVHDIGKAR 69 ++E++ A+ L D YT H+++ A LA I + L+L++E+I + +A+QVHDIGK Sbjct: 262 FKELVAAISTALELRDAYTAGHQNKVAYLAKAIAQELNLSSEQIQCIELAAQVHDIGKIG 321 Query: 70 IPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDGSGYPRGI 129 IP +LTKP ++S E++++KTH + GY+IL I FP+ +AEIV HHE LDGSGYPRG+ Sbjct: 322 IPFEILTKPTKLSELEFELIKTHCKAGYDILKGIHFPWPIAEIVWQHHERLDGSGYPRGL 381 Query: 130 SGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVVDAC 185 GD+I LEA+I+ VAD V+SMS+ RPYR +LG++AALD+IQ+ SGV D VV+AC Sbjct: 382 KGDQITLEAKIIAVADTVDSMSSHRPYRPALGINAALDQIQKFSGVLFDPEVVNAC 437 >ref|YP_856303.1| sensory box protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gb|ABK38764.1| sensory box protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 508 Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 90/186 (48%), Positives = 132/186 (70%) Query: 11 QEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQVHDIGKARI 70 ++ + A+ AV D YT H+ A LA+ IGR L L +R+ L++ + VHDIGK ++ Sbjct: 315 EDALGAIAAVLEQRDPYTAGHQKHVATLALAIGRELKLDEKRLRGLYLGAMVHDIGKIQV 374 Query: 71 PLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDGSGYPRGIS 130 PL +LTKPGR++ +E++++K H GY++L I+ P+ +A+++H HHE++DGSGYP G+ Sbjct: 375 PLNILTKPGRLTPQEFNLVKEHPGAGYQVLKDIALPWPVAQMIHQHHEFIDGSGYPAGLK 434 Query: 131 GDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVVDACLDVVK 190 G++I LEARILTVADIVESMS+DRPYR +LG+ A I G +LDA VVDACL ++ Sbjct: 435 GEQILLEARILTVADIVESMSSDRPYRAALGIPQARAHIIELRGSKLDAAVVDACLRILD 494 Query: 191 RSNWRP 196 R ++ P Sbjct: 495 RGDFTP 500 >ref|YP_004393012.1| sensory box protein [Aeromonas veronii B565] gb|AEB50395.1| Sensory box protein [Aeromonas veronii B565] Length = 514 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 92/186 (49%), Positives = 131/186 (70%) Query: 11 QEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQVHDIGKARI 70 ++ + A+ AV D YT H+ A+LA IGR L L +R+ +++ + VHDIGK ++ Sbjct: 323 EDALGAIAAVLEQRDPYTAGHQKHVAKLAQAIGRELRLEEKRLRGIYLGAMVHDIGKIQV 382 Query: 71 PLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDGSGYPRGIS 130 P +LTKP R++ E++++K H GY +L I FP+ +A ++H HHEYLDGSGYP+G+ Sbjct: 383 PAEILTKPERLTPLEFELVKEHPAIGYLVLKDIDFPWPIARMIHQHHEYLDGSGYPQGLK 442 Query: 131 GDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVVDACLDVVK 190 GDEI LEARILTVADIVESMS+DRPYR +LG+ A ++I + G +LDA VVDACL ++ Sbjct: 443 GDEILLEARILTVADIVESMSSDRPYRAALGIPQAREQIIQMRGHQLDADVVDACLRILD 502 Query: 191 RSNWRP 196 R ++ P Sbjct: 503 RGDFIP 508 >ref|YP_003828416.1| PAS/PAC sensor protein [Acetohalobium arabaticum DSM 5501] gb|ADL13351.1| putative PAS/PAC sensor protein [Acetohalobium arabaticum DSM 5501] Length = 622 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 83/185 (44%), Positives = 137/185 (74%) Query: 8 KIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQVHDIGK 67 K + ++D + +V L D YT H+ + AELAV IGR ++L ++ I+ + +A +HDIGK Sbjct: 430 KTFNSMVDTLGSVISLRDPYTAGHQQRVAELAVEIGREMNLHSDMIEGIKVAGILHDIGK 489 Query: 68 ARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDGSGYPR 127 ++P +L++PG I+ EE+ +++ H + GY+IL ++ F + +AE+ HHE +DGSGYP+ Sbjct: 490 IKVPAEILSRPGEITDEEFQLIQQHCRHGYDILQEVEFDWPIAEVALQHHERIDGSGYPQ 549 Query: 128 GISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVVDACLD 187 G+SG++I LEA+IL VAD+VE+MS+ RPYR SLG+ AA++EI++ G++ ++ VVDACL+ Sbjct: 550 GLSGEDILLEAKILAVADVVEAMSSHRPYRPSLGIDAAINEIKKNKGLKYNSRVVDACLN 609 Query: 188 VVKRS 192 V++ + Sbjct: 610 VLENN 614 >ref|YP_422803.1| response regulator [Magnetospirillum magneticum AMB-1] dbj|BAE52244.1| Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Magnetospirillum magneticum AMB-1] Length = 532 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 87/179 (48%), Positives = 121/179 (67%) Query: 7 NKIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQVHDIG 66 + + I+A+ + + D YT H+ + AE+AV IGR L L E + L +A +HDIG Sbjct: 336 ERALEGTIEAVASTIEVRDPYTAGHQRRVAEIAVAIGRQLGLPAETLKGLRVAGTIHDIG 395 Query: 67 KARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDGSGYP 126 K IP +LT+PGR+S E+D+++ H G EILN + FP+ +A++V HHE +DGSGYP Sbjct: 396 KIGIPAEMLTRPGRLSALEFDIIRNHSADGCEILNGVDFPWPIADMVRHHHERMDGSGYP 455 Query: 127 RGISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVVDAC 185 G+ GDEI EARIL VAD+VE++++DRPYR +LG+ AA+ EI SG DA VVDAC Sbjct: 456 DGLKGDEILFEARILAVADVVEAIASDRPYRAALGLDAAMREIIAHSGTLFDAAVVDAC 514 >ref|YP_003554680.1| putative PAS/PAC sensor protein [Aminobacterium colombiense DSM 12261] gb|ADE57956.1| putative PAS/PAC sensor protein [Aminobacterium colombiense DSM 12261] Length = 884 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 85/196 (43%), Positives = 133/196 (67%), Gaps = 3/196 (1%) Query: 7 NKIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQVHDIG 66 +K ++E M + + D YT H+ + A LA I ++L R++A+ A+ VHDIG Sbjct: 684 SKTFKETFHLMSRLLEIKDPYTAGHQQKVAYLAKAIAERMELPHNRVEAVFYAALVHDIG 743 Query: 67 KARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDGSGYP 126 K +P ++L+KPGR+S E+ ++K H +FG EIL+ I+FP+ +A+IV HHE++DG+GYP Sbjct: 744 KIPVPSSILSKPGRLSEAEFAIIKNHARFGAEILSAINFPWPIADIVLQHHEHVDGTGYP 803 Query: 127 RGISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVVDACL 186 G+ GDEI LEA+I+ V+D+VE+MS+ RPYR +LG+ AL+EIQ++ + D+ VVD CL Sbjct: 804 HGLKGDEISLEAKIVCVSDVVEAMSSFRPYRPALGIEEALEEIQKKRQIWFDSRVVDVCL 863 Query: 187 DVVKRSN---WRPISN 199 + K + W+ I+ Sbjct: 864 HIFKETGGEFWKEITK 879 >ref|ZP_00053842.1| COG2206: HD-GYP domain [Magnetospirillum magnetotacticum MS-1] Length = 531 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 85/183 (46%), Positives = 125/183 (68%) Query: 7 NKIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQVHDIG 66 + + I+A+ + + D YT H+ + AE+AV IGR + L+ E++ L +A +HDIG Sbjct: 336 ERALEGTIEAVASTIEVRDPYTAGHQRRVAEIAVAIGRRMGLSEEQLKGLRVAGTIHDIG 395 Query: 67 KARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDGSGYP 126 K +P +LT+PGR+S E+D+++ H G EILN + FP+ +A++V HHE +DGSGYP Sbjct: 396 KIGVPAEMLTRPGRLSPIEFDIIRNHSADGCEILNGVDFPWPIADMVRHHHERMDGSGYP 455 Query: 127 RGISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVVDACL 186 G+ GD+I LEARIL VAD+VE++++DRPYR +LG+ AA+ EI G DA VVDAC Sbjct: 456 DGLKGDQILLEARILAVADVVEAIASDRPYRAALGLEAAMREIITHRGSSFDAEVVDACR 515 Query: 187 DVV 189 +V Sbjct: 516 ALV 518 >ref|YP_002352404.1| metal dependent phosphohydrolase [Dictyoglomus turgidum DSM 6724] gb|ACK41790.1| metal dependent phosphohydrolase [Dictyoglomus turgidum DSM 6724] Length = 389 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 80/193 (41%), Positives = 127/193 (65%) Query: 3 VSESNKIYQEVIDAMIAVHRLTDGYTPNHEDQTAELAVMIGRHLDLATERIDALHMASQV 62 + + N++ +V++ + + D YT H+ + A+LA IG+ + L+ E++ L+MA + Sbjct: 195 IQKINRLLNQVVETLAEIVEKRDPYTAGHQKRVAKLAFFIGKEMGLSEEKLKGLYMAGLL 254 Query: 63 HDIGKARIPLALLTKPGRISVEEYDVLKTHVQFGYEILNKISFPFNLAEIVHCHHEYLDG 122 HDIGK +P +L KPG++ E++++K H + GYEIL I FP+ +AEIV HHE ++G Sbjct: 255 HDIGKIAVPTDILNKPGKLDPIEFELIKKHPEVGYEILKNIEFPYPVAEIVLEHHERING 314 Query: 123 SGYPRGISGDEIPLEARILTVADIVESMSADRPYRKSLGMSAALDEIQRQSGVRLDAVVV 182 SGYP+G+ +I +EARIL V+D+VE+MS+ RPYR + + AL EI + G+ D VV Sbjct: 315 SGYPKGLKDGDILIEARILAVSDVVEAMSSHRPYRPAFPLETALREISEKKGILYDEEVV 374 Query: 183 DACLDVVKRSNWR 195 DAC+ + K N+R Sbjct: 375 DACIKLFKEKNFR 387