BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0411.p (184 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778067.1| hypothetical protein Hsero_4693 [Herbaspiril... 365 1e-99 ref|YP_004684028.1| hypothetical protein CNE_1c01780 [Cupriavidu... 254 3e-66 ref|YP_724707.1| prolyl-tRNA synthetase domain-containing protei... 254 4e-66 ref|YP_002980102.1| YbaK/prolyl-tRNA synthetase associated prote... 252 2e-65 ref|YP_001795525.1| hypothetical protein RALTA_A0130 [Cupriavidu... 252 2e-65 ref|YP_001897708.1| YbaK/prolyl-tRNA synthetase associated prote... 251 4e-65 ref|YP_582274.1| hypothetical protein Rmet_0119 [Cupriavidus met... 250 5e-65 ref|YP_294380.1| YbaK/prolyl-tRNA synthetase associated region [... 249 1e-64 ref|YP_003753764.1| hypothetical protein RPSI07_3154 [Ralstonia ... 248 2e-64 emb|CAQ56550.1| ybak/prolyl-trna synthetase associated region; p... 247 5e-64 >ref|YP_003778067.1| hypothetical protein Hsero_4693 [Herbaspirillum seropedicae SmR1] gb|ADJ66159.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 184 Score = 365 bits (938), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 183/184 (99%), Positives = 183/184 (99%) Query: 1 MLLSFPACSPAFAIAMTDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAV 60 MLLSFPACSPAF IAMTDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAV Sbjct: 1 MLLSFPACSPAFVIAMTDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAV 60 Query: 61 GCDVAEIAKSIIFRRLADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAI 120 GCDVAEIAKSIIFRRLADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAI Sbjct: 61 GCDVAEIAKSIIFRRLADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAI 120 Query: 121 GGVCPVGHVVKPVMLIDRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADVRLEAP 180 GGVCPVGHVVKPVMLIDRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADVRLEAP Sbjct: 121 GGVCPVGHVVKPVMLIDRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADVRLEAP 180 Query: 181 PPAH 184 PPAH Sbjct: 181 PPAH 184 >ref|YP_004684028.1| hypothetical protein CNE_1c01780 [Cupriavidus necator N-1] gb|AEI75547.1| hypothetical protein CNE_1c01780 [Cupriavidus necator N-1] Length = 166 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 122/160 (76%), Positives = 139/160 (86%) Query: 16 MTDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIFRR 75 MT LP SAQRVADLL +GHD+PVVMLP+TG+TSAEAAA +GC VAEIAKSIIFRR Sbjct: 1 MTVNDEALPESAQRVADLLAGLGHDRPVVMLPATGKTSAEAAAGLGCSVAEIAKSIIFRR 60 Query: 76 LADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPVML 135 +ADDAPVLVIASG+NRVDEAKV A G LGKADA+FVREKTGYAIGGVCP+GH V PVML Sbjct: 61 VADDAPVLVIASGSNRVDEAKVAAHVGALGKADARFVREKTGYAIGGVCPIGHAVAPVML 120 Query: 136 IDRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADV 175 +D+DLF +DS+WAAAGHPHA+F+LT QL++MTG VADV Sbjct: 121 LDQDLFRYDSLWAAAGHPHAVFNLTPQQLQQMTGAEVADV 160 >ref|YP_724707.1| prolyl-tRNA synthetase domain-containing protein [Ralstonia eutropha H16] emb|CAJ91339.1| uncharacterized conserved protein containing prolyl-tRNA synthetase domain [Ralstonia eutropha H16] Length = 166 Score = 254 bits (649), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 122/160 (76%), Positives = 139/160 (86%) Query: 16 MTDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIFRR 75 MT LP SAQRVADLL +GHD+PVVMLP+TG+TSAEAAA +GC VAEIAKSIIFRR Sbjct: 1 MTVNDEALPESAQRVADLLAGLGHDRPVVMLPATGKTSAEAAAGLGCSVAEIAKSIIFRR 60 Query: 76 LADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPVML 135 +ADDAPVLVIASG+NRVDEAKV A G LGKADA+FVREKTGYAIGGVCP+GH V PVML Sbjct: 61 VADDAPVLVIASGSNRVDEAKVAARVGALGKADARFVREKTGYAIGGVCPIGHAVAPVML 120 Query: 136 IDRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADV 175 +D+DLF +DS+WAAAGHPHA+F+LT QL++MTG VADV Sbjct: 121 LDQDLFRYDSLWAAAGHPHAVFNLTPHQLQQMTGAEVADV 160 >ref|YP_002980102.1| YbaK/prolyl-tRNA synthetase associated protein [Ralstonia pickettii 12D] gb|ACS61430.1| YbaK/prolyl-tRNA synthetase associated region [Ralstonia pickettii 12D] Length = 166 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/162 (75%), Positives = 139/162 (85%) Query: 17 TDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIFRRL 76 TDT APLP SAQRVAD L ++G++K +VMLP+TG+TSAEAAA +GC VAEIAKSIIFRR Sbjct: 4 TDTNAPLPESAQRVADHLRTLGYEKAIVMLPATGKTSAEAAAGLGCSVAEIAKSIIFRRA 63 Query: 77 ADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPVMLI 136 DD PVLVIASG NRVDEAKV+A G L KADAKFVREKTGYAIGGVCPVGH VKPVML+ Sbjct: 64 EDDVPVLVIASGTNRVDEAKVSAHVGALAKADAKFVREKTGYAIGGVCPVGHAVKPVMLL 123 Query: 137 DRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADVRLE 178 D+DLF +DS+WAAAGHPHA+F+LT A+LE MTG VAD+ L Sbjct: 124 DQDLFQYDSVWAAAGHPHAVFNLTPAELEAMTGAPVADIALR 165 >ref|YP_001795525.1| hypothetical protein RALTA_A0130 [Cupriavidus taiwanensis LMG 19424] emb|CAP62803.1| conserved hypothetical protein; YbaK/prolyl-tRNA synthetase associated region [Cupriavidus taiwanensis LMG 19424] Length = 172 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 123/162 (75%), Positives = 141/162 (87%), Gaps = 2/162 (1%) Query: 14 IAMTDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIF 73 + M D A LP SAQRVADLL +GHD+PVVMLP+TG+TSAEAAA +GC VAEIAKSIIF Sbjct: 1 MTMPDQA--LPESAQRVADLLAGIGHDRPVVMLPATGKTSAEAAAGLGCSVAEIAKSIIF 58 Query: 74 RRLADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPV 133 RR+ADDAPVLVIASG+NRVDEAKV A G LGKADA+FVREKTGYAIGGVCP+GH V PV Sbjct: 59 RRVADDAPVLVIASGSNRVDEAKVAARVGALGKADARFVREKTGYAIGGVCPIGHAVAPV 118 Query: 134 MLIDRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADV 175 ML+D+DLF +DS+WAAAGHPHA+F+LT QL++MTG VADV Sbjct: 119 MLLDQDLFRYDSLWAAAGHPHAVFNLTPHQLQQMTGAEVADV 160 >ref|YP_001897708.1| YbaK/prolyl-tRNA synthetase associated protein [Ralstonia pickettii 12J] ref|ZP_07674832.1| YbaK/prolyl-tRNA synthetase associated region [Ralstonia sp. 5_7_47FAA] gb|ACD25276.1| YbaK/prolyl-tRNA synthetase associated region [Ralstonia pickettii 12J] gb|EFP66757.1| YbaK/prolyl-tRNA synthetase associated region [Ralstonia sp. 5_7_47FAA] Length = 166 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 121/159 (76%), Positives = 138/159 (86%) Query: 17 TDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIFRRL 76 TDT APLP SAQRVAD L ++G++K +VMLP+TG+TSAEAAA +GC VAEIAKSIIFRR Sbjct: 4 TDTKAPLPESAQRVADHLRTLGYEKNIVMLPATGKTSAEAAAGLGCSVAEIAKSIIFRRA 63 Query: 77 ADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPVMLI 136 DD PVLVIASG NRVDEAKV+A G L KADAKFVREKTGYAIGGVCPVGH VKPVML+ Sbjct: 64 EDDVPVLVIASGTNRVDEAKVSAHVGALAKADAKFVREKTGYAIGGVCPVGHAVKPVMLL 123 Query: 137 DRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADV 175 D+DLF +DS+WAAAGHPHA+F+LT A+LE MTG VAD+ Sbjct: 124 DQDLFQYDSLWAAAGHPHAVFNLTPAELEAMTGAPVADI 162 >ref|YP_582274.1| hypothetical protein Rmet_0119 [Cupriavidus metallidurans CH34] gb|ABF07005.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 165 Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 119/153 (77%), Positives = 135/153 (88%) Query: 23 LPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIFRRLADDAPV 82 LP +AQRVADLLV +GHD+PVVMLP+TG+TSAEAAA +GC VAEIAKSIIFRR+ DD PV Sbjct: 7 LPDAAQRVADLLVGIGHDRPVVMLPATGKTSAEAAAGLGCTVAEIAKSIIFRRVEDDVPV 66 Query: 83 LVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPVMLIDRDLFN 142 LVIASG+NRVDEAKV A G LGKADAKFVREKTGYAIGGVCP+GH V PVML+D+DLF Sbjct: 67 LVIASGSNRVDEAKVAARVGALGKADAKFVREKTGYAIGGVCPIGHAVAPVMLLDQDLFQ 126 Query: 143 FDSIWAAAGHPHALFSLTAAQLEKMTGGAVADV 175 +DS+WAAAGHPHA+F+LT QL+ MTG VADV Sbjct: 127 YDSVWAAAGHPHAVFNLTPQQLQAMTGAEVADV 159 >ref|YP_294380.1| YbaK/prolyl-tRNA synthetase associated region [Ralstonia eutropha JMP134] gb|AAZ59536.1| YbaK/prolyl-tRNA synthetase associated region [Ralstonia eutropha JMP134] Length = 174 Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 118/153 (77%), Positives = 134/153 (87%) Query: 23 LPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIFRRLADDAPV 82 LP SA RVA LL +GHD+PVVMLP+TG+TSAEAAA +GC VAEIAKSIIFRRL DDAPV Sbjct: 16 LPESAHRVASLLAGIGHDRPVVMLPATGKTSAEAAAGLGCSVAEIAKSIIFRRLEDDAPV 75 Query: 83 LVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPVMLIDRDLFN 142 LVIASG+NRVDEAKV A G LGKADAKFVREKTGYAIGGVCP+GH V PVML+D+DLF Sbjct: 76 LVIASGSNRVDEAKVAARVGALGKADAKFVREKTGYAIGGVCPIGHAVAPVMLLDQDLFR 135 Query: 143 FDSIWAAAGHPHALFSLTAAQLEKMTGGAVADV 175 ++S+WAAAGHPHA+F+LT QL++MTG VADV Sbjct: 136 YESLWAAAGHPHAVFNLTPQQLQQMTGAEVADV 168 >ref|YP_003753764.1| hypothetical protein RPSI07_3154 [Ralstonia solanacearum PSI07] emb|CBJ52506.1| conserved protein of unknown function; YbaK/prolyl-tRNA synthetase associated region [Ralstonia solanacearum PSI07] emb|CCA80399.1| conserved hypothetical protein; YbaK/prolyl-tRNA synthetase associated region [blood disease bacterium R229] Length = 169 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 120/159 (75%), Positives = 137/159 (86%) Query: 17 TDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIFRRL 76 +DT APLP SAQRVAD L ++G+DK +VMLP+TG+TSAEAAA +GC VAEIAKSI+FRR Sbjct: 7 SDTNAPLPESAQRVADHLRTLGYDKTIVMLPATGKTSAEAAAGLGCSVAEIAKSILFRRA 66 Query: 77 ADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPVMLI 136 DDAPVLVIASG NRVDEAKV+A G L KADA+FVREKTGYAIGGVCPVGH VKPVML+ Sbjct: 67 EDDAPVLVIASGTNRVDEAKVSARVGALAKADARFVREKTGYAIGGVCPVGHAVKPVMLL 126 Query: 137 DRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADV 175 D DLF FDS+WAAAGHPHA+F+LT A+L MTG VAD+ Sbjct: 127 DEDLFRFDSVWAAAGHPHAVFNLTPAELAAMTGAPVADI 165 >emb|CAQ56550.1| ybak/prolyl-trna synthetase associated region; protein [Ralstonia solanacearum MolK2] Length = 167 Score = 247 bits (631), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 119/159 (74%), Positives = 136/159 (85%) Query: 17 TDTAAPLPSSAQRVADLLVSMGHDKPVVMLPSTGRTSAEAAAAVGCDVAEIAKSIIFRRL 76 +DT APLP SAQRVAD L ++G++K +VMLP+TG+TSAEAAA +GC VAEIAKSIIFRR Sbjct: 5 SDTNAPLPESAQRVADHLRTLGYEKTIVMLPATGKTSAEAAAGLGCSVAEIAKSIIFRRA 64 Query: 77 ADDAPVLVIASGANRVDEAKVTALTGPLGKADAKFVREKTGYAIGGVCPVGHVVKPVMLI 136 DDAPVLVIASG NRVDEAKV+A G L KADA+FVREKTGYAIGGVCPVGH VKPVML+ Sbjct: 65 TDDAPVLVIASGTNRVDEAKVSARVGTLAKADARFVREKTGYAIGGVCPVGHAVKPVMLL 124 Query: 137 DRDLFNFDSIWAAAGHPHALFSLTAAQLEKMTGGAVADV 175 D DLF FDS+WAAAGHPHA+F+LT A+L MTG V D+ Sbjct: 125 DEDLFRFDSVWAAAGHPHAVFNLTPAELAAMTGAPVVDI 163