BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0407.p (136 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778063.1| hypothetical protein Hsero_4689 [Herbaspiril... 288 3e-76 ref|YP_002980111.1| hypothetical protein Rpic12D_0129 [Ralstonia... 143 9e-33 ref|YP_001897716.1| hypothetical protein Rpic_0121 [Ralstonia pi... 142 1e-32 ref|YP_003753754.1| hypothetical protein RPSI07_3144 [Ralstonia ... 141 3e-32 emb|CCA88537.1| conserved hypothetical protein (UPF0225) [Ralsto... 141 3e-32 emb|CBJ39424.1| conserved protein of unknown function (UPF0225) ... 139 2e-31 ref|YP_003746980.1| hypothetical protein RCFBP_21223 [Ralstonia ... 137 5e-31 ref|ZP_00943495.1| hypothetical protein RRSL_04040 [Ralstonia so... 129 2e-28 ref|NP_518391.1| hypothetical protein RSc0270 [Ralstonia solanac... 128 2e-28 emb|CAQ56561.1| conserved hypothetical protein [Ralstonia solana... 128 2e-28 >ref|YP_003778063.1| hypothetical protein Hsero_4689 [Herbaspirillum seropedicae SmR1] gb|ADJ66155.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 136 Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 136/136 (100%), Positives = 136/136 (100%) Query: 1 MSNKKDKACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDT 60 MSNKKDKACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDT Sbjct: 1 MSNKKDKACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDT 60 Query: 61 LPEEELTSETDVKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDA 120 LPEEELTSETDVKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDA Sbjct: 61 LPEEELTSETDVKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDA 120 Query: 121 AGQMRWYYVDGSFPED 136 AGQMRWYYVDGSFPED Sbjct: 121 AGQMRWYYVDGSFPED 136 >ref|YP_002980111.1| hypothetical protein Rpic12D_0129 [Ralstonia pickettii 12D] gb|ACS61439.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 146 Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 74/135 (54%), Positives = 92/135 (68%), Gaps = 9/135 (6%) Query: 8 ACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEELT 67 ACPCG ++ +CCG F G + ATA+ LMRSRYSA+ L D AYLR TW P T P + T Sbjct: 14 ACPCGNGAYARCCGPFHAGDAVAATAEQLMRSRYSAYVLGDTAYLRRTWHPSTCPVDLET 73 Query: 68 SETD---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG-- 122 SE D +W+GLD+K+H + ATVEFVAR++V GRAHRLHE S FVR DA+G Sbjct: 74 SEADAAATRWLGLDVKRHT-PQDATHATVEFVARYRVGGRAHRLHETSRFVRL-DASGAE 131 Query: 123 --QMRWYYVDGSFPE 135 + RW YVDG+FP+ Sbjct: 132 SAEGRWLYVDGTFPD 146 >ref|YP_001897716.1| hypothetical protein Rpic_0121 [Ralstonia pickettii 12J] ref|ZP_07674824.1| SEC-C motif domain protein [Ralstonia sp. 5_7_47FAA] gb|ACD25284.1| conserved hypothetical protein [Ralstonia pickettii 12J] gb|EFP66749.1| SEC-C motif domain protein [Ralstonia sp. 5_7_47FAA] Length = 146 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 74/135 (54%), Positives = 92/135 (68%), Gaps = 9/135 (6%) Query: 8 ACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEELT 67 ACPCG ++ +CCG F G + ATA+ LMRSRYSA+ L D AYLR TW P T P + T Sbjct: 14 ACPCGNGAYARCCGPFHAGEAVAATAEQLMRSRYSAYVLGDTAYLRRTWHPSTCPVDLET 73 Query: 68 SETD---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG-- 122 SE D +W+GLD+++H + ATVEFVAR+KV GRAHRLHE S FVR DA+G Sbjct: 74 SEADAAATRWLGLDVRRHT-PQDATHATVEFVARYKVGGRAHRLHETSRFVRL-DASGAE 131 Query: 123 --QMRWYYVDGSFPE 135 + RW YVDG+FP+ Sbjct: 132 SAEGRWLYVDGTFPD 146 >ref|YP_003753754.1| hypothetical protein RPSI07_3144 [Ralstonia solanacearum PSI07] emb|CBJ52496.1| conserved protein of unknown function (UPF0225) [Ralstonia solanacearum PSI07] emb|CCA80409.1| conserved hypothetical protein (UPF0225) [blood disease bacterium R229] Length = 144 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 74/134 (55%), Positives = 88/134 (65%), Gaps = 9/134 (6%) Query: 7 KACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEEL 66 +ACPCG ++ +CCG F G +PATA+ LMRSRYSA+ L D AYLR TW P T P + Sbjct: 12 EACPCGAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLHDTAYLRRTWHPSTCPTDLE 71 Query: 67 TSETD---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG- 122 SE D +W+GLD+K+H ATVEFVAR+KV GRAHRLHE S FVR DA+G Sbjct: 72 RSEADAPATRWLGLDVKRHAQ-QDPTHATVEFVARYKVGGRAHRLHETSRFVRL-DASGA 129 Query: 123 ---QMRWYYVDGSF 133 Q RW YVDG Sbjct: 130 ESPQGRWLYVDGDL 143 >emb|CCA88537.1| conserved hypothetical protein (UPF0225) [Ralstonia syzygii R24] Length = 144 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 74/133 (55%), Positives = 87/133 (65%), Gaps = 9/133 (6%) Query: 8 ACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEELT 67 ACPCG ++ +CCG F G +PATA+ LMRSRYSA+ L D AYLR TW P T P + Sbjct: 13 ACPCGAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLHDTAYLRRTWHPSTCPTDLER 72 Query: 68 SETD---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG-- 122 SE D +W+GLD+K+H ATVEFVAR+KV GRAHRLHE S FVR DA+G Sbjct: 73 SEADAPATRWLGLDVKRHAQ-QDPTHATVEFVARYKVGGRAHRLHETSRFVRL-DASGAE 130 Query: 123 --QMRWYYVDGSF 133 Q RW YVDG Sbjct: 131 SPQGRWLYVDGDL 143 >emb|CBJ39424.1| conserved protein of unknown function (UPF0225) [Ralstonia solanacearum CMR15] Length = 144 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/134 (55%), Positives = 86/134 (64%), Gaps = 9/134 (6%) Query: 7 KACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEEL 66 +ACPCG ++ +CCG F G PATA+ LMRSRYSA+ L D AYLR TW P T P + Sbjct: 12 EACPCGAGAYGRCCGPFHAGDAAPATAEQLMRSRYSAYVLHDTAYLRRTWHPSTCPADLE 71 Query: 67 TSETD---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG- 122 S+ D +W+GLDIK+H ATVEFVAR+KV GRAHRLHE S FVR DA G Sbjct: 72 RSDADAPATRWLGLDIKRHAQ-QDPTHATVEFVARYKVGGRAHRLHETSRFVRL-DAGGA 129 Query: 123 ---QMRWYYVDGSF 133 Q RW YVDG Sbjct: 130 ESPQGRWLYVDGDL 143 >ref|YP_003746980.1| hypothetical protein RCFBP_21223 [Ralstonia solanacearum CFBP2957] emb|CBJ44398.1| conserved protein of unknown function (UPF0225) [Ralstonia solanacearum CFBP2957] Length = 144 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 72/134 (53%), Positives = 86/134 (64%), Gaps = 9/134 (6%) Query: 7 KACPCGQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEEL 66 +ACPCG ++ CCG F G +PATA+ LMRSRYSA+ L D YLR TW P T P + Sbjct: 12 EACPCGAGTYGHCCGPFHAGDAVPATAEQLMRSRYSAYVLGDTVYLRRTWHPSTCPADLE 71 Query: 67 TSETD---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG- 122 E+D +W+GLD+K+H ATVEFVAR+KV GRAHRLHE S FVR DA+G Sbjct: 72 RGESDAPATRWLGLDVKRHAQ-QDPTHATVEFVARYKVGGRAHRLHETSRFVRL-DASGA 129 Query: 123 ---QMRWYYVDGSF 133 Q RW YVDG Sbjct: 130 ESPQGRWLYVDGDL 143 >ref|ZP_00943495.1| hypothetical protein RRSL_04040 [Ralstonia solanacearum UW551] ref|YP_002258500.1| hypothetical protein RSIPO_00289 [Ralstonia solanacearum IPO1609] gb|EAP74110.1| hypothetical protein RRSL_04040 [Ralstonia solanacearum UW551] emb|CAQ60422.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 146 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/129 (53%), Positives = 83/129 (64%), Gaps = 9/129 (6%) Query: 12 GQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEELTSETD 71 G ++ +CCG F G +PATA+ LMRSRYSA+ L D YLR TW P T P + SE+D Sbjct: 17 GAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLGDTVYLRRTWHPSTCPADLERSESD 76 Query: 72 ---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG----QM 124 +W+GLD+K+H ATVEFVAR+KV GRAHRLHE S FVR DA+G Q Sbjct: 77 APATRWLGLDVKRHAQ-QDPTHATVEFVARYKVGGRAHRLHETSRFVRL-DASGAESPQG 134 Query: 125 RWYYVDGSF 133 RW YVDG Sbjct: 135 RWLYVDGDL 143 >ref|NP_518391.1| hypothetical protein RSc0270 [Ralstonia solanacearum GMI1000] sp|Q8Y2R5.1|Y270_RALSO RecName: Full=UPF0225 protein RSc0270 emb|CAD13798.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000] Length = 144 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/129 (53%), Positives = 81/129 (62%), Gaps = 9/129 (6%) Query: 12 GQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEELTSETD 71 G ++ +CCG F G +PATA+ LMRSRYSA+ L D AYLR TW P T P + E D Sbjct: 17 GAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLHDTAYLRRTWHPSTCPTDLERGEAD 76 Query: 72 ---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG----QM 124 +W+GLD+K+H ATVEFVAR+KV GRAHRLHE S FVR DA G Q Sbjct: 77 APATRWLGLDVKRHTQ-QDPTHATVEFVARYKVGGRAHRLHETSRFVRL-DAGGAESPQG 134 Query: 125 RWYYVDGSF 133 RW YVDG Sbjct: 135 RWLYVDGDL 143 >emb|CAQ56561.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 144 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/129 (53%), Positives = 83/129 (64%), Gaps = 9/129 (6%) Query: 12 GQPSFDKCCGRFITGGQIPATADLLMRSRYSAFALRDEAYLRATWFPDTLPEEELTSETD 71 G ++ +CCG F G +PATA+ LMRSRYSA+ L D YLR TW P T P + SE+D Sbjct: 17 GAGAYGRCCGPFHAGDAVPATAEQLMRSRYSAYVLGDTVYLRRTWHPSTCPADLERSESD 76 Query: 72 ---VKWIGLDIKKHQHVAGSDEATVEFVARFKVAGRAHRLHEISNFVRQPDAAG----QM 124 +W+GLD+K+H ATVEFVAR+KV GRAHRLHE S FVR DA+G Q Sbjct: 77 APATRWLGLDVKRHAQ-QDPTHATVEFVARYKVGGRAHRLHETSRFVRL-DASGAESPQG 134 Query: 125 RWYYVDGSF 133 RW YVDG Sbjct: 135 RWLYVDGDL 143