BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0383.p (369 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778040.1| rod shape-determining (RodA protein) transme... 724 0.0 ref|YP_004754761.1| Rod shape-determining protein rodA [Collimon... 616 e-174 ref|ZP_08273274.1| Rod shape-determining protein RodA [Oxalobact... 593 e-167 ref|ZP_04579301.1| rod shape-determining protein RodA [Oxalobact... 558 e-157 emb|CAL60407.2| Rod shape-determining protein RodA [Herminiimona... 551 e-155 ref|ZP_04577164.1| rod shape-determining protein RodA [Oxalobact... 545 e-153 ref|YP_001351890.1| rod shape-determining protein RodA [Janthino... 525 e-147 ref|YP_582210.1| cell wall shape-determining protein MrdB [Cupri... 500 e-139 ref|YP_001098536.1| rod shape-determining protein rodA [Herminii... 495 e-138 ref|YP_294306.1| rod shape-determining protein RodA [Ralstonia e... 493 e-137 >ref|YP_003778040.1| rod shape-determining (RodA protein) transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ66132.1| rod shape-determining (RodA protein) transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 369 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/369 (100%), Positives = 369/369 (100%) Query: 1 MSLQRPPLWQIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAF 60 MSLQRPPLWQIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAF Sbjct: 1 MSLQRPPLWQIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAF 60 Query: 61 VVMWIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKI 120 VVMWIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKI Sbjct: 61 VVMWIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKI 120 Query: 121 AMPLMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAG 180 AMPLMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAG Sbjct: 121 AMPLMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAG 180 Query: 181 LPWKILAGLFVAGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGG 240 LPWKILAGLFVAGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGG Sbjct: 181 LPWKILAGLFVAGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGG 240 Query: 241 VTGKGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAP 300 VTGKGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAP Sbjct: 241 VTGKGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAP 300 Query: 301 TLFTRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSI 360 TLFTRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSI Sbjct: 301 TLFTRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSI 360 Query: 361 QRHRKLVQS 369 QRHRKLVQS Sbjct: 361 QRHRKLVQS 369 >ref|YP_004754761.1| Rod shape-determining protein rodA [Collimonas fungivorans Ter331] gb|AEK63938.1| Rod shape-determining protein rodA [Collimonas fungivorans Ter331] Length = 370 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 301/366 (82%), Positives = 334/366 (91%) Query: 4 QRPPLWQIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAFVVM 63 R +WQ IK H+ VFDGALSLI+FLILSVGI+TLYSAG++FPGRVEDQLRNILVAFV+M Sbjct: 5 DRHAVWQNIKSHIAVFDGALSLIMFLILSVGIITLYSAGIDFPGRVEDQLRNILVAFVIM 64 Query: 64 WIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKIAMP 123 WIAANVSPQ L+R A+P Y +GV+LLIAVA+FGI+KKGSRRW+NIGMV+QPSEIMKIAMP Sbjct: 65 WIAANVSPQTLMRFAIPAYALGVSLLIAVAVFGIVKKGSRRWINIGMVIQPSEIMKIAMP 124 Query: 124 LMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAGLPW 183 LMLAWYFQKREGM+ W +VVAA+LL +P LIIRQPDLGTG LVLAAGFYVIF AGL W Sbjct: 125 LMLAWYFQKREGMISWRDYVVAALLLALPVGLIIRQPDLGTGTLVLAAGFYVIFLAGLSW 184 Query: 184 KILAGLFVAGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGGVTG 243 ++L GL VA ASLPV+WS +HDYQRQRVMMLIDPTSDPLGKGFHIIQSTIA+GSGGV G Sbjct: 185 RVLIGLAVAAGASLPVLWSVLHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAVGSGGVLG 244 Query: 244 KGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAPTLF 303 KGWL GTQ HLEFIPERTTDFIF+V+SEEFGLIGN VLL LY+LLIGRG+MI NAPT+F Sbjct: 245 KGWLKGTQAHLEFIPERTTDFIFAVFSEEFGLIGNCVLLFLYMLLIGRGMMIAVNAPTMF 304 Query: 304 TRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQRH 363 TRLL G+IT+IFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQRH Sbjct: 305 TRLLAGSITLIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQRH 364 Query: 364 RKLVQS 369 RKL+Q+ Sbjct: 365 RKLIQT 370 >ref|ZP_08273274.1| Rod shape-determining protein RodA [Oxalobacteraceae bacterium IMCC9480] gb|EGF33259.1| Rod shape-determining protein RodA [Oxalobacteraceae bacterium IMCC9480] Length = 371 Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust. Identities = 297/367 (80%), Positives = 336/367 (91%) Query: 3 LQRPPLWQIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAFVV 62 ++R PLW IKP LTVFDG L+LI+FLI+SVG+VTLYSAG++FPGRVEDQLRNIL+AF+V Sbjct: 5 IERRPLWPRIKPLLTVFDGPLALIIFLIVSVGLVTLYSAGIDFPGRVEDQLRNILIAFIV 64 Query: 63 MWIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKIAM 122 MWIAA V PQ L+R AVP+Y+ G+ LLIAVA+FG++KKG+RRW+N+G+V+QPSEIMKIAM Sbjct: 65 MWIAATVPPQTLMRFAVPIYSFGIALLIAVAVFGLVKKGARRWINLGIVIQPSEIMKIAM 124 Query: 123 PLMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAGLP 182 PLMLAW+FQKREGM+RW F+VAA+LL IP LI RQPDLGT LLVLAAGFYVIF AGL Sbjct: 125 PLMLAWFFQKREGMIRWTEFLVAAVLLAIPVALIARQPDLGTALLVLAAGFYVIFLAGLS 184 Query: 183 WKILAGLFVAGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGGVT 242 WK++AGLFV AASLPV+W+ +HDYQRQRVMMLIDPTSDPLGKGFHIIQSTIA+GSGG+ Sbjct: 185 WKVIAGLFVTVAASLPVLWTVLHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAVGSGGLF 244 Query: 243 GKGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAPTL 302 GKGWL GTQ HLEFIPERTTDFIF+VYSEEFGL+GN+VLL LY+LLI RGL+I ANAPT+ Sbjct: 245 GKGWLKGTQAHLEFIPERTTDFIFAVYSEEFGLVGNLVLLTLYMLLISRGLVIAANAPTV 304 Query: 303 FTRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQR 362 FTRLL GAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQR Sbjct: 305 FTRLLAGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQR 364 Query: 363 HRKLVQS 369 HR LVQS Sbjct: 365 HRTLVQS 371 >ref|ZP_04579301.1| rod shape-determining protein RodA [Oxalobacter formigenes OXCC13] gb|EEO30274.1| rod shape-determining protein RodA [Oxalobacter formigenes OXCC13] Length = 370 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 269/358 (75%), Positives = 316/358 (88%) Query: 12 IKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAFVVMWIAANVSP 71 +K +L+VFDG L+LI+FLI+SVGI+TLYSAG++FPGRVEDQLRNI+ F++MWIAA+V P Sbjct: 13 LKHYLSVFDGPLALIIFLIMSVGIITLYSAGIDFPGRVEDQLRNIIFGFIIMWIAASVPP 72 Query: 72 QLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKIAMPLMLAWYFQ 131 Q L+R AVPVYT G+ LL+AVA FG++KKG+RRWLNIG+V+QPSEIMKIA+PLMLAW+FQ Sbjct: 73 QTLMRFAVPVYTFGIALLLAVAAFGLVKKGARRWLNIGIVIQPSEIMKIAVPLMLAWFFQ 132 Query: 132 KREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAGLPWKILAGLFV 191 KREG L W + +A +LL IP LI++QPDLGT LLV A GFYVIF AGL WK++ LF Sbjct: 133 KREGHLGWREYGIAFVLLAIPAGLIMKQPDLGTALLVAATGFYVIFLAGLAWKVIISLFA 192 Query: 192 AGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGGVTGKGWLMGTQ 251 AG A LP+VW+ +HDYQR RVMMLIDPTSDPLGKGFHIIQS IAIGSGG+TGKGWL GTQ Sbjct: 193 AGLACLPIVWTLLHDYQRHRVMMLIDPTSDPLGKGFHIIQSVIAIGSGGITGKGWLHGTQ 252 Query: 252 THLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAPTLFTRLLGGAI 311 +L FIPERTTDFIF+V++EEFGLIGN++L+VLYL LI RGLMI NA +LF+RL+ GAI Sbjct: 253 AYLHFIPERTTDFIFAVFAEEFGLIGNLILMVLYLCLIARGLMIAMNASSLFSRLVAGAI 312 Query: 312 TMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQRHRKLVQS 369 TM+FF YAFVNMGMVSGILPVVGVPLPFMSYGGTA+VTLGLGAGILMSIQRHRKLVQ+ Sbjct: 313 TMMFFMYAFVNMGMVSGILPVVGVPLPFMSYGGTAMVTLGLGAGILMSIQRHRKLVQT 370 >emb|CAL60407.2| Rod shape-determining protein RodA [Herminiimonas arsenicoxydans] Length = 367 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 275/366 (75%), Positives = 324/366 (88%), Gaps = 1/366 (0%) Query: 4 QRPPLWQIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAFVVM 63 +R P WQI++P++ VFDG L LIV LIL++G VTLYSAG++FPGRVED +RNI+++F+VM Sbjct: 3 KRSP-WQILQPYVQVFDGPLMLIVCLILALGTVTLYSAGIDFPGRVEDHVRNIMISFLVM 61 Query: 64 WIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKIAMP 123 WIAA + PQ L+R AVP+Y +G++LLI VA+FG+I+ G+RRW+N+GM++QPSEIMKIAMP Sbjct: 62 WIAAMIPPQTLMRFAVPLYILGISLLIGVAMFGLIRNGARRWINVGMIIQPSEIMKIAMP 121 Query: 124 LMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAGLPW 183 +MLAW+FQKREGM RW F+VA +LL++P LI+RQPDLGT LLV+AAGFYVIFFAGL W Sbjct: 122 MMLAWFFQKREGMTRWREFLVAGLLLVVPVGLIMRQPDLGTSLLVMAAGFYVIFFAGLSW 181 Query: 184 KILAGLFVAGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGGVTG 243 K++ ASLPVVWS MHDYQR RV+ LIDPT+DPLGKGFHIIQSTIAIGSGG+TG Sbjct: 182 KVIVAAVTVMLASLPVVWSMMHDYQRGRVLTLIDPTTDPLGKGFHIIQSTIAIGSGGITG 241 Query: 244 KGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAPTLF 303 KGWL GTQ HLEFIPERTTDFIF+V+SEEFGLIGN +LLVLYLLLIGR ++I ANAPTLF Sbjct: 242 KGWLNGTQAHLEFIPERTTDFIFAVFSEEFGLIGNGILLVLYLLLIGRSMLIAANAPTLF 301 Query: 304 TRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQRH 363 +RLL GAITMIFFTYAFVNMGMVSGILPVVGVPLPF+SYGGTA VTLGLG GILMSIQRH Sbjct: 302 SRLLAGAITMIFFTYAFVNMGMVSGILPVVGVPLPFVSYGGTAFVTLGLGVGILMSIQRH 361 Query: 364 RKLVQS 369 RKL+QS Sbjct: 362 RKLMQS 367 >ref|ZP_04577164.1| rod shape-determining protein RodA [Oxalobacter formigenes HOxBLS] gb|EEO28126.1| rod shape-determining protein RodA [Oxalobacter formigenes HOxBLS] Length = 370 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 274/358 (76%), Positives = 317/358 (88%) Query: 12 IKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAFVVMWIAANVSP 71 +K L VFDG L+LIVFLI+SVGIVTLYSAG++FPGRVEDQLRNIL+ F +MWIAA+V P Sbjct: 13 LKSWLAVFDGPLALIVFLIMSVGIVTLYSAGIDFPGRVEDQLRNILIGFAIMWIAASVPP 72 Query: 72 QLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKIAMPLMLAWYFQ 131 Q L+R AVP+YT G+ LL+AVA+FG+IKKG+RRWLNIG+V+QPSEIMKIA+PLMLAW+FQ Sbjct: 73 QTLMRFAVPIYTFGIALLLAVAMFGLIKKGARRWLNIGIVIQPSEIMKIALPLMLAWFFQ 132 Query: 132 KREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAGLPWKILAGLFV 191 KREG + W +++A +L IP LI++QPDLGT LLV A GFYVIF AGL WK++ +FV Sbjct: 133 KREGHIGWKEYLIAMGILAIPAGLIMKQPDLGTALLVAATGFYVIFLAGLAWKVIIAMFV 192 Query: 192 AGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGGVTGKGWLMGTQ 251 AGAASLP+VW+ +HDYQR RVMMLIDP+SDPLGKGFHIIQS IAIGSGG+TGKGWL GTQ Sbjct: 193 AGAASLPIVWTLLHDYQRHRVMMLIDPSSDPLGKGFHIIQSVIAIGSGGITGKGWLQGTQ 252 Query: 252 THLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAPTLFTRLLGGAI 311 +L FIPERTTDFIF+V+SEEFGLIGNIVL++LYLLLI RGLMI NA T+F RLL GAI Sbjct: 253 AYLHFIPERTTDFIFAVFSEEFGLIGNIVLIILYLLLIARGLMIAMNASTVFARLLAGAI 312 Query: 312 TMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQRHRKLVQS 369 TM+FF YAFVNMGMVSGILPVVGVPLPFMSYGGTA+VTLGLG GILMSIQRHRKLVQ+ Sbjct: 313 TMMFFMYAFVNMGMVSGILPVVGVPLPFMSYGGTAMVTLGLGTGILMSIQRHRKLVQT 370 >ref|YP_001351890.1| rod shape-determining protein RodA [Janthinobacterium sp. Marseille] gb|ABR89723.1| rod shape-determining protein RodA [Janthinobacterium sp. Marseille] Length = 371 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 269/368 (73%), Positives = 318/368 (86%) Query: 2 SLQRPPLWQIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAFV 61 + + L QII P++ +FD L +IV +IL+VG VTLYSAG++FPGRVED +RNI+++FV Sbjct: 4 QMNKRSLGQIILPYIQMFDVPLIIIVSMILAVGTVTLYSAGIDFPGRVEDHVRNIMISFV 63 Query: 62 VMWIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKIA 121 VMWIAA + PQ L+R AVP+Y G+ LL+AVA FG+I+ G+RRW+++G+VVQPSEIMKIA Sbjct: 64 VMWIAAAIPPQTLMRFAVPLYVTGIILLLAVAQFGLIRNGARRWVDLGVVVQPSEIMKIA 123 Query: 122 MPLMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAGL 181 MP+MLAW+FQKREG+ RW F++A ++L+ P LI+RQPDLGT LLVLAAGFYVIF AGL Sbjct: 124 MPMMLAWFFQKREGVTRWREFLIAGLMLIAPVGLIMRQPDLGTSLLVLAAGFYVIFLAGL 183 Query: 182 PWKILAGLFVAGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAIGSGGV 241 WK+L ++ AASLPVVWS +HDYQR RV+ LIDPT+DPLGKGFHIIQSTIAIGSGG+ Sbjct: 184 SWKVLVAAAISVAASLPVVWSMLHDYQRGRVLTLIDPTTDPLGKGFHIIQSTIAIGSGGI 243 Query: 242 TGKGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMITANAPT 301 TGKGWL GTQ HLEFIPERTTDFIF+V+SEEFGLIGN VLL LYLLLIGR ++I ANAPT Sbjct: 244 TGKGWLNGTQAHLEFIPERTTDFIFAVFSEEFGLIGNCVLLFLYLLLIGRSMIIAANAPT 303 Query: 302 LFTRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGILMSIQ 361 LF+RLL GAIT+IFFTYAFVNMGMVSGILPVVGVPLPF SYGGTA VTLGLG GILMSIQ Sbjct: 304 LFSRLLAGAITLIFFTYAFVNMGMVSGILPVVGVPLPFFSYGGTAFVTLGLGVGILMSIQ 363 Query: 362 RHRKLVQS 369 RHRKL+QS Sbjct: 364 RHRKLMQS 371 >ref|YP_582210.1| cell wall shape-determining protein MrdB [Cupriavidus metallidurans CH34] gb|ABF06941.1| cell wall shape-determining protein MrdB [Cupriavidus metallidurans CH34] Length = 380 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/380 (69%), Positives = 310/380 (81%), Gaps = 13/380 (3%) Query: 3 LQRPPLWQIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAFVV 62 + R + IIK LT FD L+LIVFL+ + GIV LYSA ++ PGRVEDQLRNIL+++VV Sbjct: 1 MDRRRVVSIIKSALTGFDKPLALIVFLLFATGIVALYSAAIDMPGRVEDQLRNILLSYVV 60 Query: 63 MWIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKIAM 122 M + A + QLL+R+AVP+YTVGV LLIAVA+FG+I+KG+RRWLN+GMV+QPSEIMKIAM Sbjct: 61 MLVIAYMPTQLLMRIAVPLYTVGVALLIAVAMFGLIRKGARRWLNVGMVIQPSEIMKIAM 120 Query: 123 PLMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAGLP 182 PLMLAWYFQKREG+++W FVVA I+L IP LI +QPDLGT LLVLAAG YVI+FAGL Sbjct: 121 PLMLAWYFQKREGVIKWFDFVVALIMLGIPVGLIAKQPDLGTALLVLAAGIYVIYFAGLT 180 Query: 183 WKILAGLFVAGAASLPVV-------------WSFMHDYQRQRVMMLIDPTSDPLGKGFHI 229 WKI+ + AG + ++ W +HDYQ+ RV L+DPT+DPLGKGFH Sbjct: 181 WKIILPILGAGVVVITLIVTYQNQICAPGVNWPILHDYQQHRVCTLLDPTTDPLGKGFHT 240 Query: 230 IQSTIAIGSGGVTGKGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLI 289 IQS IAIGSGGVTGKGWL GTQTHLEFIPE+ TDFIF+V+SEEFGLIGN VLLVLYLLLI Sbjct: 241 IQSIIAIGSGGVTGKGWLKGTQTHLEFIPEKHTDFIFAVFSEEFGLIGNAVLLVLYLLLI 300 Query: 290 GRGLMITANAPTLFTRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVT 349 RGL I ANAPTLF+RLL G+IT+IFFTYAFVNMGMVSGILPVVGVPLP MSYGGTALVT Sbjct: 301 FRGLYIAANAPTLFSRLLAGSITLIFFTYAFVNMGMVSGILPVVGVPLPLMSYGGTALVT 360 Query: 350 LGLGAGILMSIQRHRKLVQS 369 LG+G GILMSI R ++L+Q+ Sbjct: 361 LGMGIGILMSISRQKRLIQT 380 >ref|YP_001098536.1| rod shape-determining protein rodA [Herminiimonas arsenicoxydans] Length = 321 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 245/321 (76%), Positives = 286/321 (89%) Query: 49 VEDQLRNILVAFVVMWIAANVSPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNI 108 +ED +RNI+++F+VMWIAA + PQ L+R AVP+Y +G++LLI VA+FG+I+ G+RRW+N+ Sbjct: 1 MEDHVRNIMISFLVMWIAAMIPPQTLMRFAVPLYILGISLLIGVAMFGLIRNGARRWINV 60 Query: 109 GMVVQPSEIMKIAMPLMLAWYFQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLV 168 GM++QPSEIMKIAMP+MLAW+FQKREGM RW F+VA +LL++P LI+RQPDLGT LLV Sbjct: 61 GMIIQPSEIMKIAMPMMLAWFFQKREGMTRWREFLVAGLLLVVPVGLIMRQPDLGTSLLV 120 Query: 169 LAAGFYVIFFAGLPWKILAGLFVAGAASLPVVWSFMHDYQRQRVMMLIDPTSDPLGKGFH 228 +AAGFYVIFFAGL WK++ ASLPVVWS MHDYQR RV+ LIDPT+DPLGKGFH Sbjct: 121 MAAGFYVIFFAGLSWKVIVAAVTVMLASLPVVWSMMHDYQRGRVLTLIDPTTDPLGKGFH 180 Query: 229 IIQSTIAIGSGGVTGKGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLL 288 IIQSTIAIGSGG+TGKGWL GTQ HLEFIPERTTDFIF+V+SEEFGLIGN +LLVLYLLL Sbjct: 181 IIQSTIAIGSGGITGKGWLNGTQAHLEFIPERTTDFIFAVFSEEFGLIGNGILLVLYLLL 240 Query: 289 IGRGLMITANAPTLFTRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALV 348 IGR ++I ANAPTLF+RLL GAITMIFFTYAFVNMGMVSGILPVVGVPLPF+SYGGTA V Sbjct: 241 IGRSMLIAANAPTLFSRLLAGAITMIFFTYAFVNMGMVSGILPVVGVPLPFVSYGGTAFV 300 Query: 349 TLGLGAGILMSIQRHRKLVQS 369 TLGLG GILMSIQRHRKL+QS Sbjct: 301 TLGLGVGILMSIQRHRKLMQS 321 >ref|YP_294306.1| rod shape-determining protein RodA [Ralstonia eutropha JMP134] gb|AAZ59462.1| cell elongation-specific peptidoglycan biosynthesis regulator RodA [Ralstonia eutropha JMP134] Length = 380 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 259/373 (69%), Positives = 303/373 (81%), Gaps = 13/373 (3%) Query: 10 QIIKPHLTVFDGALSLIVFLILSVGIVTLYSAGMNFPGRVEDQLRNILVAFVVMWIAANV 69 +IK T FD L+LIVFL+ + GIV LYSA ++ PGRVEDQLRNIL+++VVM + A + Sbjct: 8 SLIKTAFTGFDKPLALIVFLLFATGIVALYSAAIDMPGRVEDQLRNILLSYVVMLVIAYL 67 Query: 70 SPQLLLRLAVPVYTVGVTLLIAVALFGIIKKGSRRWLNIGMVVQPSEIMKIAMPLMLAWY 129 Q L+R+AVP+YTVGV LLIAVA+FG+I+KG+RRWLN+GMV+QPSEIMKI+MPLMLAWY Sbjct: 68 PTQTLMRVAVPIYTVGVALLIAVAMFGLIRKGARRWLNVGMVIQPSEIMKISMPLMLAWY 127 Query: 130 FQKREGMLRWDAFVVAAILLLIPGFLIIRQPDLGTGLLVLAAGFYVIFFAGLPWKI---L 186 FQKREG++RW FVVA LLLIP LI +QPDLGT LLV+AAG YVI+FAGL W+I L Sbjct: 128 FQKREGVVRWYDFVVALALLLIPVGLIAKQPDLGTALLVMAAGVYVIYFAGLSWRIILPL 187 Query: 187 AGLFVAGAASL----------PVVWSFMHDYQRQRVMMLIDPTSDPLGKGFHIIQSTIAI 236 G+ V + L V W +HDYQ+ RV L+DPT+DPLGKGFH IQS IAI Sbjct: 188 LGVLVVAVSLLITYQNDICAPGVNWPILHDYQQHRVCTLLDPTTDPLGKGFHTIQSIIAI 247 Query: 237 GSGGVTGKGWLMGTQTHLEFIPERTTDFIFSVYSEEFGLIGNIVLLVLYLLLIGRGLMIT 296 GSGGV GKGWL GTQTHLEFIPE+ TDFIF+VYSEEFGLIGN +LLVLYLLLI RGL I Sbjct: 248 GSGGVDGKGWLKGTQTHLEFIPEKHTDFIFAVYSEEFGLIGNAILLVLYLLLIFRGLFIA 307 Query: 297 ANAPTLFTRLLGGAITMIFFTYAFVNMGMVSGILPVVGVPLPFMSYGGTALVTLGLGAGI 356 ANAPTLF+RLL G+IT+IFFTYAFVNMGMVSGILPVVGVPLP MSYGGTALVTLG G GI Sbjct: 308 ANAPTLFSRLLAGSITLIFFTYAFVNMGMVSGILPVVGVPLPLMSYGGTALVTLGAGIGI 367 Query: 357 LMSIQRHRKLVQS 369 LM+I R ++L+Q+ Sbjct: 368 LMAISRQKRLIQT 380