BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0353.p (241 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778016.1| protein-disulfide isomerase [Herbaspirillum ... 490 e-137 ref|ZP_03698665.1| conserved hypothetical protein [Lutiella nitr... 253 2e-65 ref|YP_004847280.1| putative protein-disulfide isomerase [Pseudo... 248 5e-64 ref|YP_002981345.1| hypothetical protein Rpic12D_1385 [Ralstonia... 244 1e-62 ref|YP_004753851.1| thioredoxin-like protein [Collimonas fungivo... 243 1e-62 ref|YP_001898896.1| hypothetical protein Rpic_1321 [Ralstonia pi... 243 2e-62 ref|ZP_07676825.1| hypothetical protein HMPREF1004_03448 [Ralsto... 241 6e-62 ref|ZP_08406174.1| hypothetical protein HGR_09880 [Hylemonella g... 239 2e-61 ref|NP_519565.1| hypothetical protein RSc1444 [Ralstonia solanac... 238 5e-61 ref|YP_001345454.1| hypothetical protein PSPA7_0058 [Pseudomonas... 237 1e-60 >ref|YP_003778016.1| protein-disulfide isomerase [Herbaspirillum seropedicae SmR1] gb|ADJ66108.1| protein-disulfide isomerase protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust. Identities = 240/241 (99%), Positives = 240/241 (99%) Query: 1 MTTPAAAHDTVLHYIHDPLCGWCYGAAPLVAAARQVLPVQAHGGGMMAGRNRRRVDAQLR 60 MTTPAAAHDTVLHYIHDPLCGWCYGAAPLVAAARQVLPVQAHGGGMMAGRNRRRVDAQLR Sbjct: 1 MTTPAAAHDTVLHYIHDPLCGWCYGAAPLVAAARQVLPVQAHGGGMMAGRNRRRVDAQLR 60 Query: 61 DYVMPHDHRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLA 120 DYVMPHDHRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQAL GEAAGLDMLA Sbjct: 61 DYVMPHDHRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALRGEAAGLDMLA 120 Query: 121 AIQRAHYQQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVG 180 AIQRAHYQQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVG Sbjct: 121 AIQRAHYQQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVG 180 Query: 181 GRGFPTFVLQRGDTLEVLDTGRWLGQPEQWANYLRDETRASSSGSADKSLTQCDLQTGRC 240 GRGFPTFVLQRGDTLEVLDTGRWLGQPEQWANYLRDETRASSSGSADKSLTQCDLQTGRC Sbjct: 181 GRGFPTFVLQRGDTLEVLDTGRWLGQPEQWANYLRDETRASSSGSADKSLTQCDLQTGRC 240 Query: 241 D 241 D Sbjct: 241 D 241 >ref|ZP_03698665.1| conserved hypothetical protein [Lutiella nitroferrum 2002] gb|EEG08659.1| conserved hypothetical protein [Lutiella nitroferrum 2002] Length = 235 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 130/233 (55%), Positives = 159/233 (68%), Gaps = 5/233 (2%) Query: 10 TVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHD 67 TVLHY++DPLCGWCYGAAPLV AAR + L V HGGGMM+G NR+ V A LR+YVMPHD Sbjct: 4 TVLHYLYDPLCGWCYGAAPLVEAARAIPGLRVALHGGGMMSGANRQPVSAALRNYVMPHD 63 Query: 68 HRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHY 127 HRIA +TGQVFG YF GLL+DT VFDS PPT A+LA +ALG G D+L IQ AHY Sbjct: 64 HRIAALTGQVFGSDYFDGLLRDTGVVFDSTPPTTAILAAEALGSR--GADLLKRIQIAHY 121 Query: 128 QQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTF 187 +GRRI++ L LA +G++ AF+AE R + HI ASR LL VGGRGFPTF Sbjct: 122 VEGRRIADAEVLGRLAADIGLDPTAFAAEFARQDGAATQAHIAASRHLLGQVGGRGFPTF 181 Query: 188 VLQRGDTLEVLDTGRWLGQPEQWANYLRDETRASSSGSADKSLTQCDLQTGRC 240 LQ+GD L +LD GR+ GQP W ++L + RA+ + A + Q +G C Sbjct: 182 ALQQGDVLTLLDAGRFFGQPAAWRHFLERQGRATLA-EAPAATAQPGCASGSC 233 >ref|YP_004847280.1| putative protein-disulfide isomerase [Pseudogulbenkiania sp. NH8B] dbj|BAK76866.1| putative protein-disulfide isomerase [Pseudogulbenkiania sp. NH8B] Length = 235 Score = 248 bits (633), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 125/212 (58%), Positives = 151/212 (71%), Gaps = 4/212 (1%) Query: 10 TVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHD 67 TVLHY++DPLCGWCYGAAPLV AAR + L V HGGGMM+G NR+ V LR+YVMPHD Sbjct: 4 TVLHYLYDPLCGWCYGAAPLVEAARAIPELHVALHGGGMMSGANRQPVSVALRNYVMPHD 63 Query: 68 HRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHY 127 HRIA +TGQVFG YF GLL+DT AVFDS PPT A+LA +ALG G D+L IQ AHY Sbjct: 64 HRIAALTGQVFGADYFDGLLRDTGAVFDSTPPTTAILAAEALGER--GADLLKRIQIAHY 121 Query: 128 QQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTF 187 +GRRI++ L +LA +G++ AF+ E R + HI ASR LL VGGRGFPTF Sbjct: 122 VEGRRIADTEVLSQLAADIGLDPTAFATESARQDGAATQAHIAASRHLLGQVGGRGFPTF 181 Query: 188 VLQRGDTLEVLDTGRWLGQPEQWANYLRDETR 219 LQ+GDTL +LD GR+ GQP W ++L + R Sbjct: 182 ALQQGDTLTLLDAGRFFGQPAVWRHFLEQQGR 213 >ref|YP_002981345.1| hypothetical protein Rpic12D_1385 [Ralstonia pickettii 12D] gb|ACS62673.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 231 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 124/208 (59%), Positives = 145/208 (69%), Gaps = 5/208 (2%) Query: 10 TVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHD 67 T LHYI+DPLCGWCYGAAPLV AAR V L + HGGGM+AG NRR V Q RDYVMPHD Sbjct: 2 TTLHYIYDPLCGWCYGAAPLVEAARTVPGLTIAFHGGGMLAGPNRRTVTPQWRDYVMPHD 61 Query: 68 HRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHY 127 HRIA++TGQ FGEPYF GLL+DT AV DS PP AVLA QALGG GLDM+ +QRAHY Sbjct: 62 HRIAELTGQPFGEPYFEGLLRDTTAVMDSEPPITAVLAAQALGGR--GLDMIHRVQRAHY 119 Query: 128 QQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTF 187 ++GRRI++ A L ELA +G+ AF AE R HI SR+ + GG+GFPTF Sbjct: 120 KEGRRIADAAVLRELATGIGLSPEAFDAEYARQAGALTQQHIAQSRQWFDRAGGQGFPTF 179 Query: 188 VLQRGD-TLEVLDTGRWLGQPEQWANYL 214 L+ D L ++D G WLG+PE W L Sbjct: 180 ALEDADGQLGIIDIGPWLGKPESWVQAL 207 >ref|YP_004753851.1| thioredoxin-like protein [Collimonas fungivorans Ter331] gb|AEK63028.1| Thioredoxin-like protein [Collimonas fungivorans Ter331] Length = 238 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 123/203 (60%), Positives = 148/203 (72%), Gaps = 4/203 (1%) Query: 10 TVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHD 67 TVLHYI+DPLCGWCYGAAPL+ AAR+V L ++ HGGGMM G NR++V AQLR+YVM HD Sbjct: 32 TVLHYIYDPLCGWCYGAAPLLQAAREVAGLHIELHGGGMMTGSNRKQVSAQLRNYVMQHD 91 Query: 68 HRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHY 127 RIA MTGQ FG+ YF+GLL DT A+FDSAPPT AVLA A+ G+ G MLA IQ AHY Sbjct: 92 QRIAAMTGQPFGDDYFNGLLLDTSAIFDSAPPTTAVLAADAIAGQ--GSAMLARIQAAHY 149 Query: 128 QQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTF 187 QG R++E A L LA +G++ A F + ++ HI ASR LL VGG+GFPTF Sbjct: 150 VQGLRVAEAAVLHALAPQIGLDPALFDGKFAELDGAATQAHIAASRALLARVGGQGFPTF 209 Query: 188 VLQRGDTLEVLDTGRWLGQPEQW 210 VLQRG +EVLDTGR+ GQ + W Sbjct: 210 VLQRGAHIEVLDTGRFFGQVQAW 232 >ref|YP_001898896.1| hypothetical protein Rpic_1321 [Ralstonia pickettii 12J] gb|ACD26464.1| conserved hypothetical protein [Ralstonia pickettii 12J] Length = 231 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 126/208 (60%), Positives = 146/208 (70%), Gaps = 5/208 (2%) Query: 10 TVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHD 67 T LHYI+DPLCGWCYGAAPLV AAR V L + HGGGM+AG NRR V Q RDYVMPHD Sbjct: 2 TTLHYIYDPLCGWCYGAAPLVEAARTVPGLTIAFHGGGMLAGPNRRAVTPQWRDYVMPHD 61 Query: 68 HRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHY 127 HRIA+MTGQ FGE YF GLL+DT AV DS PP AVLA QALGG GLDM+ +QRAHY Sbjct: 62 HRIAEMTGQPFGETYFEGLLRDTTAVMDSEPPITAVLAAQALGGR--GLDMIHRVQRAHY 119 Query: 128 QQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTF 187 ++GRRI++ L ELA +G+ AF AE R HI SR+ L+ VGG+GFPTF Sbjct: 120 EEGRRIADVLVLRELAAEIGLSPEAFDAEYARQTGALTQQHIAQSRQWLDRVGGQGFPTF 179 Query: 188 VLQRGD-TLEVLDTGRWLGQPEQWANYL 214 L+ D L ++D G WLG+PE WA L Sbjct: 180 ALEDADGQLGIIDVGLWLGKPESWAEAL 207 >ref|ZP_07676825.1| hypothetical protein HMPREF1004_03448 [Ralstonia sp. 5_7_47FAA] gb|EFP64828.1| hypothetical protein HMPREF1004_03448 [Ralstonia sp. 5_7_47FAA] Length = 231 Score = 241 bits (615), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 124/208 (59%), Positives = 146/208 (70%), Gaps = 5/208 (2%) Query: 10 TVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHD 67 T LHYI+DPLCGWCYGAAPLV AAR V L + HGGGM+AG NRR V Q RDYVMPHD Sbjct: 2 TTLHYIYDPLCGWCYGAAPLVEAARTVPGLTIAFHGGGMLAGPNRRTVTPQWRDYVMPHD 61 Query: 68 HRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHY 127 HRIA++TGQ FGEPYF LL+DT AV DS PP AAVLA +ALGG GLDM+ +QRAHY Sbjct: 62 HRIAELTGQPFGEPYFESLLRDTTAVMDSEPPIAAVLAAEALGG--CGLDMIHRVQRAHY 119 Query: 128 QQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTF 187 ++G RI++ A L ELA +G+ AF AE R HI SR+ L+ VGG+GFPTF Sbjct: 120 EEGLRIADAAVLRELAAEIGLSPEAFDAEYARQTGALTQQHIAQSRQWLDRVGGQGFPTF 179 Query: 188 VLQRGD-TLEVLDTGRWLGQPEQWANYL 214 L+ D L ++D G WLG+PE W L Sbjct: 180 ALEDADGRLGIIDIGPWLGKPESWVQAL 207 >ref|ZP_08406174.1| hypothetical protein HGR_09880 [Hylemonella gracilis ATCC 19624] gb|EGI76727.1| hypothetical protein HGR_09880 [Hylemonella gracilis ATCC 19624] Length = 231 Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 120/224 (53%), Positives = 156/224 (69%), Gaps = 3/224 (1%) Query: 10 TVLHYIHDPLCGWCYGAAPLVAAARQVLPVQAHGGGMMAGRNRRRVDAQLRDYVMPHDHR 69 +VLHYI+DPLCGWCY AAPL+ ARQ++ VQ HGGGMMAG R+RV AQLRDYVMPHD Sbjct: 4 SVLHYIYDPLCGWCYAAAPLIKEARQIVAVQPHGGGMMAGARRQRVSAQLRDYVMPHDRH 63 Query: 70 IAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHYQQ 129 I+++TGQ FGE YF GLL+DT AVFDS PPTAA+LA + L G GLDMLA +Q AHY + Sbjct: 64 ISELTGQPFGERYFDGLLRDTGAVFDSEPPTAAMLAAEQLAGR--GLDMLARLQTAHYVE 121 Query: 130 GRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTFVL 189 GRRI+E LI++A +G+ FSA L + HI+A+REL+ VG +GFPT +L Sbjct: 122 GRRIAERDMLIDVATEIGLGRTEFSAALDATLGKNTLAHIQATRELMGRVGAQGFPTLLL 181 Query: 190 QRGDTLEVLDTGRWLGQPEQWANYLRDETRASSSGSADKSLTQC 233 + +D G +LGQ + +A +LR +T + A+ ++ QC Sbjct: 182 ETDGRFRSVDIGAYLGQADAFAQWLRQQT-PNQDAQANGNILQC 224 >ref|NP_519565.1| hypothetical protein RSc1444 [Ralstonia solanacearum GMI1000] emb|CAD15146.1| putative protein-disulfide isomerase [Ralstonia solanacearum GMI1000] Length = 242 Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 123/203 (60%), Positives = 144/203 (70%), Gaps = 5/203 (2%) Query: 11 VLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMPHDH 68 LHYI DPLCGWCYGAAPLV AAR V L V HGGGM+AG NRR V Q R YVMPHDH Sbjct: 3 TLHYIFDPLCGWCYGAAPLVEAARTVPGLAVAFHGGGMLAGPNRRAVTPQWRSYVMPHDH 62 Query: 69 RIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRAHYQ 128 RIA++TGQ FG PYF GLL+DT AV DS PP A LA QA+GG GLDM+ +QRAHY+ Sbjct: 63 RIAELTGQPFGTPYFEGLLRDTTAVMDSEPPITAALAAQAIGGR--GLDMIHRVQRAHYE 120 Query: 129 QGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFPTFV 188 +GRRI++ L ELA LG+ A F AE R HI ASR LL+ VGG+G+PTFV Sbjct: 121 EGRRIADAPVLRELAVDLGLPADVFDAECARQSGALTQQHIAASRRLLDRVGGQGYPTFV 180 Query: 189 LQRGD-TLEVLDTGRWLGQPEQW 210 L+ G+ ++V+D G WLG+PE W Sbjct: 181 LEDGEGRMDVVDAGAWLGRPEAW 203 >ref|YP_001345454.1| hypothetical protein PSPA7_0058 [Pseudomonas aeruginosa PA7] gb|ABR81424.1| hypothetical protein PSPA7_0058 [Pseudomonas aeruginosa PA7] Length = 233 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 125/218 (57%), Positives = 152/218 (69%), Gaps = 5/218 (2%) Query: 8 HDTVLHYIHDPLCGWCYGAAPLVAAARQV--LPVQAHGGGMMAGRNRRRVDAQLRDYVMP 65 +D LHY++DPLCGWCYGA+PL+AAAR+V L V+ HGGGMM NR+ V A LR YVMP Sbjct: 2 NDLTLHYLYDPLCGWCYGASPLLAAAREVTGLDVRLHGGGMMTDANRQPVGAGLRHYVMP 61 Query: 66 HDHRIAQMTGQVFGEPYFHGLLKDTDAVFDSAPPTAAVLAVQALGGEAAGLDMLAAIQRA 125 HD RIAQ+TGQ FG+ YF GLL+DT AVFDSAPPTAAVLA +ALGG A MLA IQRA Sbjct: 62 HDLRIAQLTGQPFGKDYFDGLLRDTGAVFDSAPPTAAVLAAEALGGLGAA--MLARIQRA 119 Query: 126 HYQQGRRISEPATLIELAQALGIEAAAFSAELQRIEQEELADHIEASRELLNYVGGRGFP 185 HY +GRRI+E L LA LG+ F+ E L H SR L+N +G GFP Sbjct: 120 HYVEGRRIAERPVLFGLAAELGL-GQGFAEAFDACSGEPLRVHFADSRRLMNRLGAAGFP 178 Query: 186 TFVLQRGDTLEVLDTGRWLGQPEQWANYLRDETRASSS 223 TF L+R L+VLDTGR+LGQP++W +L + ++S Sbjct: 179 TFALERDGRLQVLDTGRYLGQPDEWRAFLETQKDIANS 216