BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0350.p (186 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778013.1| transcription regulator protein [Herbaspiril... 388 e-106 ref|YP_001353170.1| transcriptional regulator [Janthinobacterium... 270 5e-71 ref|YP_004752264.1| putative transcription regulator protein [Co... 266 1e-69 ref|ZP_08274727.1| transcriptional regulator, LuxR-family [Oxalo... 265 2e-69 ref|YP_001100088.1| putative transcriptional regulator [Herminii... 259 2e-67 ref|YP_004618590.1| signal transduction protein [Ramlibacter tat... 225 3e-57 ref|NP_519690.1| transcription regulator protein [Ralstonia sola... 224 5e-57 emb|CCA79811.1| putative transcriptional regulator; LuxR family ... 223 9e-57 ref|YP_003752303.1| LuxR family transcriptional regulator [Ralst... 223 1e-56 emb|CBJ37769.1| putative transcriptional regulator; LuxR family ... 223 1e-56 >ref|YP_003778013.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ66105.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 210 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 186/186 (100%), Positives = 186/186 (100%) Query: 1 MTQPLPIDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADE 60 MTQPLPIDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADE Sbjct: 25 MTQPLPIDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADE 84 Query: 61 FERTGLRLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAK 120 FERTGLRLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAK Sbjct: 85 FERTGLRLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAK 144 Query: 121 RPIAPGLTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHK 180 RPIAPGLTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHK Sbjct: 145 RPIAPGLTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHK 204 Query: 181 LLSITP 186 LLSITP Sbjct: 205 LLSITP 210 >ref|YP_001353170.1| transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89101.1| transcriptional regulator [Janthinobacterium sp. Marseille] Length = 197 Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 123/184 (66%), Positives = 152/184 (82%) Query: 1 MTQPLPIDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADE 60 M +P ID+E +F HAPIGMC+S +RV+ N A+AAMFGYE AL SF ++YP+ E Sbjct: 7 MNEPADIDYESIFRHAPIGMCISQHRVMHDCNHALAAMFGYEHGALNGLSFAQLYPSYVE 66 Query: 61 FERTGLRLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAK 120 FERTG R+VPI+N KG YSDERIMKR++ ++FWCHV+G AL+ ++PHAAGIWTFED+S K Sbjct: 67 FERTGARIVPIMNTKGCYSDERIMKRADGQLFWCHVSGRALHSEDPHAAGIWTFEDLSEK 126 Query: 121 RPIAPGLTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHK 180 RP+ LTPREREIAALLV+GKTSKLIA+Q+ LSPRTVEMHRA+LMRKF A TSSELV++ Sbjct: 127 RPVTAELTPREREIAALLVDGKTSKLIAKQIGLSPRTVEMHRAKLMRKFTATTSSELVNR 186 Query: 181 LLSI 184 LL + Sbjct: 187 LLGV 190 >ref|YP_004752264.1| putative transcription regulator protein [Collimonas fungivorans Ter331] gb|AEK61441.1| putative transcription regulator protein [Collimonas fungivorans Ter331] Length = 191 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 125/184 (67%), Positives = 148/184 (80%), Gaps = 3/184 (1%) Query: 4 PLP---IDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADE 60 PLP +D+E +F HAPIGMCVS R++Q NLA+A MF Y+ L SFQ +YPT DE Sbjct: 2 PLPNLAVDYETIFAHAPIGMCVSERRIMQVCNLALARMFAYQPGELNGQSFQVLYPTQDE 61 Query: 61 FERTGLRLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAK 120 FERTG R+VPI+N KG YSDERIM+R+N E+FWCHVTGHAL ++ HAAGIWTFED+S K Sbjct: 62 FERTGARIVPIMNAKGIYSDERIMRRANGELFWCHVTGHALVPEDTHAAGIWTFEDLSEK 121 Query: 121 RPIAPGLTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHK 180 R + L+PREREIAALLVEGKTSKLI +Q+ LSPRTVEMHRA LM+KF A+TSSELVH+ Sbjct: 122 RRASSTLSPREREIAALLVEGKTSKLIGKQIGLSPRTVEMHRANLMKKFTASTSSELVHR 181 Query: 181 LLSI 184 LL I Sbjct: 182 LLGI 185 >ref|ZP_08274727.1| transcriptional regulator, LuxR-family [Oxalobacteraceae bacterium IMCC9480] gb|EGF31801.1| transcriptional regulator, LuxR-family [Oxalobacteraceae bacterium IMCC9480] Length = 186 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 122/177 (68%), Positives = 147/177 (83%) Query: 7 IDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADEFERTGL 66 ID+ +F HAP+G+CVS R+I AN ++AAMFGY E L SFQ +YP+ADEFERTGL Sbjct: 7 IDYALIFHHAPVGLCVSKRRIIHTANPSLAAMFGYLPEQLADQSFQILYPSADEFERTGL 66 Query: 67 RLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAKRPIAPG 126 R+VPI++E+G YSDERIMKR+NDE+FWC V+G L D+PHAAGIWTFED+S KR + Sbjct: 67 RIVPIMSERGSYSDERIMKRANDELFWCRVSGRGLVDDDPHAAGIWTFEDLSEKRKVTAK 126 Query: 127 LTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHKLLS 183 LTPREREIAALLVEGKTSKLIARQ+ +SPRTVEMHRA+LM+KF+A+TS ELVH LL Sbjct: 127 LTPREREIAALLVEGKTSKLIARQIGMSPRTVEMHRAKLMKKFSASTSGELVHHLLG 183 >ref|YP_001100088.1| putative transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61963.1| Transcriptional regulator, LuxR family [Herminiimonas arsenicoxydans] Length = 185 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 117/178 (65%), Positives = 144/178 (80%) Query: 7 IDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADEFERTGL 66 ID+E +F HAPIGMC+S +RVI N A+ MFGY AL SF +YP+ EFERTG Sbjct: 6 IDYESIFQHAPIGMCISQHRVIHVCNAALTQMFGYPDGALAGLSFSVLYPSHTEFERTGA 65 Query: 67 RLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAKRPIAPG 126 R++PI+NEKG YSDERIMKR++ +FWCHV+G AL +PHAAGIWTF+D+S KRP+ Sbjct: 66 RIIPIMNEKGCYSDERIMKRADGRLFWCHVSGRALLPHDPHAAGIWTFDDLSEKRPVTAA 125 Query: 127 LTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHKLLSI 184 LTPREREIAA+LV+GKTSKLIARQ+ LSPRTVEMHRA+LMRKF A+T+SEL+H+LL + Sbjct: 126 LTPREREIAAMLVDGKTSKLIARQIGLSPRTVEMHRAKLMRKFTASTTSELIHRLLGV 183 >ref|YP_004618590.1| signal transduction protein [Ramlibacter tataouinensis TTB310] gb|AEG92571.1| signal transduction protein : sensor, PAS/PAC domains; transcriptional regulator, LuxR family-like protein [Ramlibacter tataouinensis TTB310] Length = 181 Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 101/179 (56%), Positives = 135/179 (75%) Query: 5 LPIDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADEFERT 64 + ID+ F HAP+G+C+S NR I N + MFG EAL SFQ +YP+ADE+ER Sbjct: 1 MDIDYRIAFQHAPVGLCLSRNRSIVDCNQQLCDMFGATREALIGQSFQVLYPSADEYERL 60 Query: 65 GLRLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAKRPIA 124 G R+ PILN KG Y+D+RIMKR++ E+FWCHVTG ALNR PH AGIW FED+S++RP+ Sbjct: 61 GARMAPILNAKGHYADDRIMKRADGEVFWCHVTGRALNRAAPHEAGIWAFEDLSSQRPVK 120 Query: 125 PGLTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHKLLS 183 LT RERE+AA L++G TSK I + + +S RTVE++RARLMRK+ A+T+++LVHKL++ Sbjct: 121 AELTAREREVAARLLDGMTSKEIGKALAISHRTVEIYRARLMRKYKASTTADLVHKLMA 179 >ref|NP_519690.1| transcription regulator protein [Ralstonia solanacearum GMI1000] emb|CAD15271.1| putative transcription regulator protein [Ralstonia solanacearum GMI1000] Length = 181 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 103/177 (58%), Positives = 135/177 (76%) Query: 7 IDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADEFERTGL 66 +D++ F AP+GM +S RV+ N A +FG+ A+ SF+ +YPT DE+ERTG Sbjct: 4 LDYQTAFQLAPVGMVMSRERVMVDVNEEAARIFGHPRTAMIGQSFELLYPTHDEYERTGA 63 Query: 67 RLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAKRPIAPG 126 R+VPI+N +G YSDERIMKR+N E+FWCHVTG AL+R P GIWTFED+SA RP+ Sbjct: 64 RIVPIMNARGSYSDERIMKRANGELFWCHVTGRALDRTRPLGEGIWTFEDLSAHRPVTAA 123 Query: 127 LTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHKLLS 183 LTPRER+IAA LVEGKTSK I +Q+++SPRTVE++RARLM+K+AA+TS ELV +L+ Sbjct: 124 LTPRERDIAAQLVEGKTSKQIGKQLDISPRTVEIYRARLMKKYAASTSLELVQRLMG 180 >emb|CCA79811.1| putative transcriptional regulator; LuxR family [blood disease bacterium R229] Length = 181 Score = 223 bits (568), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 103/177 (58%), Positives = 134/177 (75%) Query: 7 IDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADEFERTGL 66 +D++ F AP+GM +S RV+ N A +FG+ A+ SF+ +YPT DE+ERTG Sbjct: 4 LDYQTAFQLAPVGMVMSRERVMVDVNEEAARIFGHPRTAMIGQSFELLYPTHDEYERTGA 63 Query: 67 RLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAKRPIAPG 126 R+VPI+N +G YSDERIMKR+N E+FWCHVTG AL+R P GIWTFED+SA RP+ Sbjct: 64 RIVPIMNTRGSYSDERIMKRANGELFWCHVTGRALDRTKPLGEGIWTFEDLSAHRPVTAA 123 Query: 127 LTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHKLLS 183 LTPRER+IAA LVEGKTSK I +Q+++SPRTVE++RARLM+K+AA TS ELV +L+ Sbjct: 124 LTPRERDIAAQLVEGKTSKQIGKQLDISPRTVEIYRARLMKKYAANTSLELVQRLMG 180 >ref|YP_003752303.1| LuxR family transcriptional regulator [Ralstonia solanacearum PSI07] emb|CBJ51018.1| putative transcriptional regulator; LuxR family [Ralstonia solanacearum PSI07] Length = 181 Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 103/177 (58%), Positives = 134/177 (75%) Query: 7 IDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADEFERTGL 66 +D++ F AP+GM +S RV+ N A +FG+ A+ SF+ +YPT DE+ERTG Sbjct: 4 LDYQTAFQLAPVGMVMSRERVMVDVNEEAARIFGHPRTAMIGQSFELLYPTHDEYERTGA 63 Query: 67 RLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAKRPIAPG 126 R+VPI+N +G YSDERIMKR+N E+FWCHVTG AL+R P GIWTFED+SA RP+ Sbjct: 64 RIVPIMNARGSYSDERIMKRANGELFWCHVTGRALDRTKPLGEGIWTFEDLSAHRPVTAA 123 Query: 127 LTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHKLLS 183 LTPRER+IAA LVEGKTSK I +Q+++SPRTVE++RARLM+K+AA TS ELV +L+ Sbjct: 124 LTPRERDIAAQLVEGKTSKQIGKQLDISPRTVEIYRARLMKKYAANTSLELVQRLMG 180 >emb|CBJ37769.1| putative transcriptional regulator; LuxR family [Ralstonia solanacearum CMR15] Length = 181 Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 103/177 (58%), Positives = 134/177 (75%) Query: 7 IDFEQVFMHAPIGMCVSHNRVIQQANLAMAAMFGYEVEALRQTSFQEIYPTADEFERTGL 66 +D++ F AP+GM +S RV+ N A +FG+ A+ SF+ +YPT DE+ERTG Sbjct: 4 LDYQTAFQLAPVGMVMSRERVMVDVNEEAARIFGHPRTAMIGQSFELLYPTHDEYERTGA 63 Query: 67 RLVPILNEKGFYSDERIMKRSNDEMFWCHVTGHALNRDNPHAAGIWTFEDVSAKRPIAPG 126 R+VPI+N +G YSDERIMKR N E+FWCHVTG AL+R P GIWTFED+SA RP+ Sbjct: 64 RIVPIMNARGSYSDERIMKRVNGELFWCHVTGRALDRTRPLGEGIWTFEDLSAHRPVTAA 123 Query: 127 LTPREREIAALLVEGKTSKLIARQVELSPRTVEMHRARLMRKFAAATSSELVHKLLS 183 LTPRER+IAA LVEGKTSK I +Q+++SPRTVE++RARLM+K+AA+TS ELV +L+ Sbjct: 124 LTPRERDIAAQLVEGKTSKQIGKQLDISPRTVEIYRARLMKKYAASTSLELVQRLMG 180