BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0335.p (115 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778001.1| membrane protein [Herbaspirillum seropedicae... 233 1e-59 ref|YP_001563080.1| hypothetical protein Daci_2055 [Delftia acid... 205 2e-51 gb|EGP47309.1| membrane protein [Achromobacter xylosoxidans AXX-A] 196 1e-48 ref|YP_674212.1| hypothetical protein Meso_1652 [Mesorhizobium s... 182 1e-44 ref|ZP_05032626.1| conserved hypothetical protein [Brevundimonas... 177 6e-43 ref|YP_004011473.1| hypothetical protein Rvan_1103 [Rhodomicrobi... 172 2e-41 ref|ZP_06123499.1| putative membrane protein [Providencia rettge... 172 2e-41 ref|YP_421557.1| hypothetical protein amb2194 [Magnetospirillum ... 171 3e-41 ref|YP_003755790.1| hypothetical protein Hden_1662 [Hyphomicrobi... 171 3e-41 ref|YP_004675738.1| hypothetical protein HYPMC_1946 [Hyphomicrob... 170 7e-41 >ref|YP_003778001.1| membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ66093.1| membrane protein [Herbaspirillum seropedicae SmR1] Length = 115 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 115/115 (100%), Positives = 115/115 (100%) Query: 1 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS 60 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS Sbjct: 1 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS 60 Query: 61 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPIG 115 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPIG Sbjct: 61 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPIG 115 >ref|YP_001563080.1| hypothetical protein Daci_2055 [Delftia acidovorans SPH-1] ref|YP_004489966.1| hypothetical protein DelCs14_4635 [Delftia sp. Cs1-4] gb|ABX34695.1| protein of unknown function DUF486 [Delftia acidovorans SPH-1] gb|AEF91611.1| protein of unknown function DUF486 [Delftia sp. Cs1-4] Length = 115 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 95/114 (83%), Positives = 109/114 (95%) Query: 1 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS 60 MSPK+ P++ L+ISNVFMTFAWYGHLKFENRPLYLVILVSW+IALAEYCFAVPANR+GH Sbjct: 1 MSPKIAPVLLLLISNVFMTFAWYGHLKFENRPLYLVILVSWLIALAEYCFAVPANRLGHE 60 Query: 61 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPI 114 VY+AAELKT+QEVITLVVF++FSVLYLGE+ T+NHLVGFG ICLGAFF+FKGP+ Sbjct: 61 VYSAAELKTIQEVITLVVFAVFSVLYLGEKLTLNHLVGFGFICLGAFFVFKGPL 114 >gb|EGP47309.1| membrane protein [Achromobacter xylosoxidans AXX-A] Length = 115 Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 89/114 (78%), Positives = 104/114 (91%) Query: 1 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS 60 MSPK+LP+ L++SNVFMTFAWYGHLKF RPLY+V+L SW+IA AEYCFAVPANRIGH+ Sbjct: 1 MSPKLLPVALLLVSNVFMTFAWYGHLKFGERPLYVVVLASWLIAFAEYCFAVPANRIGHT 60 Query: 61 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPI 114 VY+AAELKTMQEVITL VF++FSV YLGE+ T+NHLVGFGCI LGAFF+FKGP+ Sbjct: 61 VYSAAELKTMQEVITLTVFAVFSVFYLGERLTLNHLVGFGCIGLGAFFVFKGPL 114 >ref|YP_674212.1| hypothetical protein Meso_1652 [Mesorhizobium sp. BNC1] gb|ABG63047.1| protein of unknown function DUF486 [Chelativorans sp. BNC1] Length = 116 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 88/113 (77%), Positives = 97/113 (85%) Query: 3 PKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHSVY 62 P + PI+ L ISN+FMTFAWYGHLKF ++PL LVIL SW IA EYCFAVPANR GH+VY Sbjct: 4 PYLAPILLLTISNIFMTFAWYGHLKFGSKPLLLVILASWGIAFIEYCFAVPANRYGHAVY 63 Query: 63 NAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPIG 115 +AAELKTMQEVITL VF++FSV YLGEQ TINH VGFG ICLGAFFIFKGPIG Sbjct: 64 SAAELKTMQEVITLSVFAVFSVYYLGEQLTINHAVGFGLICLGAFFIFKGPIG 116 >ref|ZP_05032626.1| conserved hypothetical protein [Brevundimonas sp. BAL3] gb|EDX80055.1| conserved hypothetical protein [Brevundimonas sp. BAL3] Length = 118 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 84/115 (73%), Positives = 100/115 (86%) Query: 1 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS 60 +SP + PIV L +SNVFMTFAWYGHLKF+++PL+L+++ SW IA EY AVPANRIGH Sbjct: 3 LSPYIAPIVMLALSNVFMTFAWYGHLKFDHKPLWLLVMASWGIAFFEYWLAVPANRIGHQ 62 Query: 61 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPIG 115 VY+AAELKTMQEVITL+VF+ FSVLYLGE+ T+NHLVGFG I LGAFFIFKGP+G Sbjct: 63 VYSAAELKTMQEVITLLVFAGFSVLYLGEKLTVNHLVGFGFIGLGAFFIFKGPLG 117 >ref|YP_004011473.1| hypothetical protein Rvan_1103 [Rhodomicrobium vannielii ATCC 17100] gb|ADP70374.1| protein of unknown function DUF486 [Rhodomicrobium vannielii ATCC 17100] Length = 116 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 78/115 (67%), Positives = 97/115 (84%) Query: 1 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS 60 +S +LP++ L+ SNVFMTFAWYGHLKF +RPL++VILVSW IA EYC AVPANRIG + Sbjct: 2 VSANILPVLLLLASNVFMTFAWYGHLKFTDRPLWIVILVSWSIAFFEYCLAVPANRIGST 61 Query: 61 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPIG 115 VY+ AELK MQEVITL+VF++F++ YLGE+FTINH++GF I LGAFF+FK PI Sbjct: 62 VYSGAELKAMQEVITLIVFAVFAITYLGERFTINHVIGFSFIALGAFFVFKAPIS 116 >ref|ZP_06123499.1| putative membrane protein [Providencia rettgeri DSM 1131] gb|EFE55750.1| putative membrane protein [Providencia rettgeri DSM 1131] Length = 114 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 83/113 (73%), Positives = 93/113 (82%) Query: 1 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS 60 M K+ P+ L+ISNVFM FAWYGHLKF +PLY+VI SW+IAL EYCFAVPANR+GH Sbjct: 1 MLTKLYPVFLLVISNVFMMFAWYGHLKFTTKPLYVVIFFSWLIALVEYCFAVPANRLGHQ 60 Query: 61 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGP 113 Y+AAELKTMQEVITL VF +FSVLYLGE FTINHL+GF I GAFFIFKGP Sbjct: 61 YYSAAELKTMQEVITLCVFVLFSVLYLGESFTINHLIGFILIFAGAFFIFKGP 113 >ref|YP_421557.1| hypothetical protein amb2194 [Magnetospirillum magneticum AMB-1] dbj|BAE50998.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1] Length = 117 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 79/113 (69%), Positives = 92/113 (81%) Query: 2 SPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHSV 61 S + PI L+ISNVFMTFAWYGHLKF +R +++ I+VSW+IA EYCFAVPANRIGH Sbjct: 3 SSAIAPIGLLVISNVFMTFAWYGHLKFTDRAMWIAIVVSWLIAFVEYCFAVPANRIGHGT 62 Query: 62 YNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPI 114 Y+ AELKTMQEVITL VF+ FSVLYLGE+ TINH +GF IC GAFF+FK PI Sbjct: 63 YSTAELKTMQEVITLTVFAGFSVLYLGERLTINHAIGFALICAGAFFVFKSPI 115 >ref|YP_003755790.1| hypothetical protein Hden_1662 [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ23469.1| protein of unknown function DUF486 [Hyphomicrobium denitrificans ATCC 51888] Length = 115 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 82/114 (71%), Positives = 95/114 (83%) Query: 1 MSPKVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHS 60 +SP +LPIV L +SNVFMT AWYGHLKF +RPL+ V+LVSW IA EYC AVPANR GH+ Sbjct: 2 ISPSLLPIVLLTMSNVFMTAAWYGHLKFTDRPLWAVVLVSWGIAFFEYCLAVPANRYGHA 61 Query: 61 VYNAAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPI 114 VY+AAELKTMQEVITLVVF++FSV+YL E TINH VGF I GAFF+FKGP+ Sbjct: 62 VYSAAELKTMQEVITLVVFAVFSVVYLKEALTINHAVGFLLIAAGAFFVFKGPL 115 >ref|YP_004675738.1| hypothetical protein HYPMC_1946 [Hyphomicrobium sp. MC1] emb|CCB65168.1| conserved membrane protein of unknown function [Hyphomicrobium sp. MC1] Length = 115 Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 83/111 (74%), Positives = 91/111 (81%) Query: 4 KVLPIVFLIISNVFMTFAWYGHLKFENRPLYLVILVSWMIALAEYCFAVPANRIGHSVYN 63 +LPIV L +SNVFMTFAWYGHLKF N+PL+LVI+VSW IA EYC AVPANR G +VYN Sbjct: 5 SLLPIVLLTMSNVFMTFAWYGHLKFTNKPLWLVIIVSWGIAFFEYCLAVPANRYGSAVYN 64 Query: 64 AAELKTMQEVITLVVFSIFSVLYLGEQFTINHLVGFGCICLGAFFIFKGPI 114 AELKTMQEVITL VFSIFSV YLGE TINH VGF I LGAFF+FK P+ Sbjct: 65 PAELKTMQEVITLTVFSIFSVTYLGETLTINHAVGFAFIALGAFFVFKAPL 115