BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0310.p (240 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777977.1| GntR family transcription regulator protein ... 477 e-133 ref|YP_002947398.1| regulatory protein GntR HTH [Variovorax para... 184 8e-45 ref|YP_001860595.1| GntR domain-containing protein [Burkholderia... 149 3e-34 ref|ZP_02884280.1| GntR domain protein [Burkholderia graminis C4... 148 7e-34 ref|ZP_00956578.1| transcriptional regulator, GntR family protei... 142 3e-32 ref|ZP_00963835.1| transcriptional regulator, GntR family protei... 142 4e-32 ref|YP_001888021.1| GntR domain-containing protein [Burkholderia... 140 2e-31 ref|YP_004230810.1| GntR domain-containing protein [Burkholderia... 136 2e-30 ref|YP_003608089.1| regulatory protein GntR HTH [Burkholderia sp... 134 2e-29 ref|YP_472852.1| GntR family transcriptional regulator [Rhizobiu... 133 3e-29 >ref|YP_003777977.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ66069.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 240 Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust. Identities = 239/240 (99%), Positives = 239/240 (99%) Query: 1 MLDSLPPSLAASRTHRLSRSEHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVR 60 MLDSLPPSLAASRTHRLSRSEHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVR Sbjct: 1 MLDSLPPSLAASRTHRLSRSEHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVR 60 Query: 61 EALSRLRSEGIVVSRRGSGNYVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIA 120 EALSRLRSEGIVVSRRGSGNYVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIA Sbjct: 61 EALSRLRSEGIVVSRRGSGNYVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIA 120 Query: 121 ATARQDEDVQAMRIALQALQRAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPI 180 ATARQDEDVQAMRIALQALQRAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPI Sbjct: 121 ATARQDEDVQAMRIALQALQRAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPI 180 Query: 181 RQCMELAQNLGSPQDGERIQTIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIFEGG 240 RQCMELAQNLGSPQDGERIQTIDDEHQAIIQAIAEGSPA AEAAMRAHIGHARLRIFEGG Sbjct: 181 RQCMELAQNLGSPQDGERIQTIDDEHQAIIQAIAEGSPARAEAAMRAHIGHARLRIFEGG 240 >ref|YP_002947398.1| regulatory protein GntR HTH [Variovorax paradoxus S110] gb|ACS22132.1| regulatory protein GntR HTH [Variovorax paradoxus S110] Length = 237 Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 102/220 (46%), Positives = 144/220 (65%) Query: 21 EHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSGN 80 + I +++ AILRG+ +++KLPTE ELA ++ SR TVREALSRLRS+GI+ SRRGSG+ Sbjct: 15 DQIYARMVEAILRGDYVDSKKLPTESELASQFGVSRPTVREALSRLRSDGIIESRRGSGS 74 Query: 81 YVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQALQ 140 V R P + P I + D+ERYYA+R VE GAA AA R +D+ +R L+A Sbjct: 75 QVVRAPGTPASSMPPIRNYSDIERYYAYRTVVESGAAAAAAEFRTADDLTTIRACLEAQT 134 Query: 141 RAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERIQ 200 A G G+++D+ H AIARA+ N FF++ +E ++ PIRQ MELA+++ S ER++ Sbjct: 135 LAMEGGNKGIEDDVRFHRAIARASHNQFFVAAVETSVAPIRQFMELARSVRSKMTVERVR 194 Query: 201 TIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIFEGG 240 + EHQ I+ AI + SPA A A R HI +A+ RIF+ Sbjct: 195 LVQMEHQQILDAIEKRSPADAAEATRLHILNAKRRIFDAA 234 >ref|YP_001860595.1| GntR domain-containing protein [Burkholderia phymatum STM815] gb|ACC73549.1| GntR domain protein [Burkholderia phymatum STM815] Length = 229 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 126/217 (58%) Query: 21 EHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSGN 80 + I I+ IL GE E +LPTE LA+R+E SR TVREAL+RLR++GI+V+R GSG Sbjct: 11 DKIYGDILNRILEGEYKEGERLPTEHALAERFETSRPTVREALARLRADGIIVTRHGSGT 70 Query: 81 YVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQALQ 140 V R P + + ++ D+ R Y FR E GAA +AA + +D+ A++ A L+ Sbjct: 71 TVARRPDPDVRRFAPLETLSDIRRCYDFRIVTESGAAELAAQMAEADDIAAIQHAWDELE 130 Query: 141 RAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERIQ 200 R G +D A H+AIARA++N FFI+ + I M L++NL + ER + Sbjct: 131 RIIETQGIGAKDDFAFHLAIARASKNQFFITMMSFIEEQIVFSMNLSRNLSLVKTLERQR 190 Query: 201 TIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIF 237 + EH A+++AI A A AMR H+ HAR R+F Sbjct: 191 LVQAEHLAVLEAIRRKDAAAAGQAMRLHLEHARDRMF 227 >ref|ZP_02884280.1| GntR domain protein [Burkholderia graminis C4D1M] gb|EDT10284.1| GntR domain protein [Burkholderia graminis C4D1M] Length = 229 Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 124/217 (57%) Query: 21 EHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSGN 80 + I I+ IL GE E ++LPTE LA+R+ SR TVREAL+RLR++GI+V+R GSG Sbjct: 11 DKIYGDILNRILEGEYKEGQRLPTEHALAERFSTSRPTVREALARLRADGIIVTRHGSGT 70 Query: 81 YVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQALQ 140 V R P + + ++ D+ R Y FR E GAA AA +D+ A+ A Q L+ Sbjct: 71 TVARRPDPDVRRFAPLETLSDIRRCYEFRIVTETGAAEHAALKADADDIAAIEEAWQQLE 130 Query: 141 RAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERIQ 200 R G +D H+A+ARA+RNPFFI+ + I M L++NL + ER + Sbjct: 131 RIIETRGIGAHDDFLFHLAVARASRNPFFITVMSFIEEQIVFSMNLSRNLSLVKTVERQR 190 Query: 201 TIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIF 237 + EH+A++ AI P A AMRAH+ +A R+F Sbjct: 191 LVQAEHRAVLDAIRRKDPQAAGQAMRAHLENALERMF 227 >ref|ZP_00956578.1| transcriptional regulator, GntR family protein [Sulfitobacter sp. EE-36] gb|EAP82870.1| transcriptional regulator, GntR family protein [Sulfitobacter sp. EE-36] Length = 230 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 125/220 (56%) Query: 20 SEHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSG 79 ++H +I+A I GE KLPTE +++ E SR +R+AL +LR +G+VVSR+GSG Sbjct: 11 ADHAYEKILAMISSGETAVGDKLPTEHAMSEMLEVSRPVLRQALKQLREDGVVVSRQGSG 70 Query: 80 NYVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQAL 139 ++VQR P + + SI D++R + FR +E AA +AA + D+ +R + L Sbjct: 71 SFVQRRPDTAVLTFAPVGSIADIQRTFEFRAAIEGEAAFLAAVRHTEADLAKLRAHFKEL 130 Query: 140 QRAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERI 199 R EG+ GV+ D A H AI A+ N +F + I + L +NL + ER+ Sbjct: 131 DRCIREGELGVEADEAFHQAICEASGNQYFATARTSMKSNILTGLNLTRNLSLSKPRERM 190 Query: 200 QTIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIFEG 239 + + EH+ I+ AI A A AAMRAH+ +A+ R+FEG Sbjct: 191 ELVQQEHRRILAAIIARDQAEARAAMRAHVENAKNRVFEG 230 >ref|ZP_00963835.1| transcriptional regulator, GntR family protein [Sulfitobacter sp. NAS-14.1] gb|EAP79681.1| transcriptional regulator, GntR family protein [Sulfitobacter sp. NAS-14.1] Length = 247 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 125/220 (56%) Query: 20 SEHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSG 79 ++H +I+A I GE KLPTE +++ E SR +R+AL +LR +G+VVSR+GSG Sbjct: 28 ADHAYEKILAMISSGETAVGDKLPTEHAMSEMLEVSRPVLRQALKQLREDGVVVSRQGSG 87 Query: 80 NYVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQAL 139 ++VQR P + + SI D++R + FR +E AA +AA + D+ +R + L Sbjct: 88 SFVQRRPDTAVLTFAPVGSIADIQRTFEFRAAIEGEAAYLAAVRHTEADLAKLRAHFKEL 147 Query: 140 QRAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERI 199 R EG+ GV+ D A H AI A+ N +F + I + L +NL + ER+ Sbjct: 148 DRCIREGELGVEADEAFHQAICEASGNQYFATARTSMKSNILTGLNLTRNLSLSKPRERM 207 Query: 200 QTIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIFEG 239 + + EH+ I+ AI A A AAMRAH+ +A+ R+FEG Sbjct: 208 ELVQQEHRRILAAIIARDQAEARAAMRAHVENAKNRVFEG 247 >ref|YP_001888021.1| GntR domain-containing protein [Burkholderia phytofirmans PsJN] gb|ACD18651.1| GntR domain protein [Burkholderia phytofirmans PsJN] Length = 229 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 123/217 (56%) Query: 21 EHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSGN 80 + I I+ I+ GE E +LPTE LA+R+ SR TVREAL+RLR++GI+++R GSG Sbjct: 11 DKIYGDILNRIVEGEYKEGERLPTEHALAERFATSRPTVREALARLRADGIIMTRHGSGT 70 Query: 81 YVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQALQ 140 V R P + + ++ D+ R Y FR E GAA AA +D+ A++ A L+ Sbjct: 71 TVARRPDPDVRRFAPLETLSDIRRCYEFRIVTEAGAAEQAALKADADDIAAIQHAWDQLE 130 Query: 141 RAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERIQ 200 R G +D H+A+ARA++NPFFI+ + I M L++NL + R + Sbjct: 131 RIIETQGIGAKDDFMFHLAVARASKNPFFITVMSFIEEQILFSMNLSRNLSLVKTVARQR 190 Query: 201 TIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIF 237 + +EH+A++ AI A +AMRAH+ +A R+F Sbjct: 191 LVQEEHRAVLDAIRRKDAPGAASAMRAHLENALERMF 227 >ref|YP_004230810.1| GntR domain-containing protein [Burkholderia sp. CCGE1001] gb|ADX57750.1| GntR domain protein [Burkholderia sp. CCGE1001] Length = 229 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 87/217 (40%), Positives = 123/217 (56%) Query: 21 EHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSGN 80 + I I+ IL GE E ++LPTE LA+R+ SR TVREAL+RLR++GI+V+R GSG Sbjct: 11 DKIYGDILNRILEGEYKEGQRLPTEHALAERFSTSRPTVREALARLRADGIIVTRHGSGT 70 Query: 81 YVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQALQ 140 V R P + + ++ D+ R Y FR E GAA AA D+ A+ A Q L+ Sbjct: 71 TVARRPDPDVRRFAPLETLSDIRRCYEFRIVTETGAAEHAALKADAADIAAIEEAWQQLE 130 Query: 141 RAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERIQ 200 R G +D H+A+ARA+RNPFFI+ + I M L++NL + ER + Sbjct: 131 RIIETRGIGAHDDFLFHLAVARASRNPFFITVMSFIEEQIVFSMNLSRNLSLVKTVERQR 190 Query: 201 TIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIF 237 + EH+A++ AI P A AMRAH+ +A R+F Sbjct: 191 LVQAEHRAVLDAIRRRDPQAAGQAMRAHLENALERMF 227 >ref|YP_003608089.1| regulatory protein GntR HTH [Burkholderia sp. CCGE1002] gb|ADG18578.1| regulatory protein GntR HTH [Burkholderia sp. CCGE1002] Length = 229 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/218 (39%), Positives = 123/218 (56%), Gaps = 2/218 (0%) Query: 21 EHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSGN 80 + I I+ IL GE E +LPTE LA+R+ SR TVREAL+RLR++GI+ +R GSG Sbjct: 11 DQIYGDILNRILEGEYKEGERLPTEHALAERFATSRPTVREALARLRADGIISTRHGSGT 70 Query: 81 YVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQALQ 140 V R P + + ++ D+ R Y FR E GAA AA D+ A++ A L+ Sbjct: 71 TVARRPDPDVRRFAPLETLSDIRRCYEFRIVTEAGAAAQAALKADANDIAAIQHAWDELE 130 Query: 141 RAQLEGQ-TGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERI 199 R +E Q G +D H A+ARA++NPFFI+ + I M L++NL + ER Sbjct: 131 RI-IEAQGIGAKDDFLFHQAVARASKNPFFITVMSFIEEQILFSMNLSRNLSLVKTVERQ 189 Query: 200 QTIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIF 237 + + EH A++ AI A A AAMRAH+ +A R+F Sbjct: 190 RLVQAEHMAVLDAIRRKDSAGAGAAMRAHLENALERMF 227 >ref|YP_472852.1| GntR family transcriptional regulator [Rhizobium etli CFN 42] gb|ABC94125.1| probable transcriptional regulator protein, GntR family [Rhizobium etli CFN 42] Length = 237 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 129/220 (58%) Query: 20 SEHICRQIIAAILRGELGENRKLPTEVELAQRYEASRTTVREALSRLRSEGIVVSRRGSG 79 S+ I +I+ I G N +LP+E +LA + ASR VREAL RLR++G+VVSR+GSG Sbjct: 17 SDIIYEKIVGMIADGNFPVNERLPSETKLAADFGASRPVVREALERLRADGLVVSRKGSG 76 Query: 80 NYVQRLPTLSSQGSPQIASIHDVERYYAFRECVEVGAAGIAATARQDEDVQAMRIALQAL 139 +YV++ P S + S+ DV+R++ FR +E AA +AA Q D + + AL A+ Sbjct: 77 SYVRQRPDSSMLKMVPVGSLADVQRFFEFRAGLEAEAAELAARNWQPADKERITEALLAI 136 Query: 140 QRAQLEGQTGVDEDLALHMAIARATRNPFFISTIEHALGPIRQCMELAQNLGSPQDGERI 199 ++ G+ G DED ALH AIA AT N F I+ E + ++L + E+I Sbjct: 137 EQCLRNGELGADEDQALHDAIAMATGNQFHITVREWFKPHFAIGHSVTRSLSLKRTPEQI 196 Query: 200 QTIDDEHQAIIQAIAEGSPAWAEAAMRAHIGHARLRIFEG 239 +++ DEH I++AI A A AM+ HI +AR R+F+G Sbjct: 197 RSVQDEHAVIVEAIFARREAEAHDAMKKHILNARARMFQG 236