BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0306.p (102 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_552277.1| hypothetical protein Bpro_5528 [Polaromonas sp.... 107 7e-22 ref|YP_002907534.1| RES domain-containing protein [Burkholderia ... 101 3e-20 ref|YP_004534906.1| hypothetical protein PP1Y_AT22403 [Novosphin... 98 4e-19 ref|YP_001115251.1| hypothetical protein Bcep1808_6074 [Burkhold... 95 4e-18 ref|YP_002551389.1| hypothetical protein Avi_9507 [Agrobacterium... 91 7e-17 ref|YP_004134565.1| res domain protein [Mesorhizobium ciceri bio... 79 3e-13 ref|ZP_05958583.1| LOW QUALITY PROTEIN: RES domain-containing pr... 78 5e-13 ref|YP_001110405.1| hypothetical protein Bcep1808_6714 [Burkhold... 78 5e-13 ref|ZP_03787022.1| RES domain-containing protein [Brucella ceti ... 76 1e-12 ref|YP_001021529.1| hypothetical protein Mpe_A2338 [Methylibium ... 75 5e-12 >ref|YP_552277.1| hypothetical protein Bpro_5528 [Polaromonas sp. JS666] gb|ABE47379.1| conserved hypothetical protein [Polaromonas sp. JS666] Length = 159 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 48/99 (48%), Positives = 62/99 (62%) Query: 2 VKIDPVVDFRGGLDEAWNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILFRS 61 + +D VVDFR G WN W + CDWR++VF + EPP+W + + A G KGILF S Sbjct: 61 LTLDKVVDFRAGFTPDWNPLWQDLSCDWRAMVFDDNVEPPTWVISDMCIAKGYKGILFPS 120 Query: 62 SVLKEGCNLVVFNRTLTDQDLISIHDPGGELPLNQLSWP 100 S L G NLV+FN ++ D + I DP G+LP NQ SWP Sbjct: 121 SALAGGNNLVIFNSSIVATDKLEIFDPKGDLPKNQASWP 159 >ref|YP_002907534.1| RES domain-containing protein [Burkholderia glumae BGR1] gb|ACR32684.1| RES domain-containing protein [Burkholderia glumae BGR1] Length = 177 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 1/99 (1%) Query: 2 VKIDPVVDFRGGLD-EAWNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILFR 60 V PVVDF GG + W W F+CDWR F + EPPSW LG++A A+GAKGILFR Sbjct: 74 VTATPVVDFTGGYRVDLWPPLWESFFCDWRHDWFNARIEPPSWVLGDEAIASGAKGILFR 133 Query: 61 SSVLKEGCNLVVFNRTLTDQDLISIHDPGGELPLNQLSW 99 S+ G NLV+F L + D + +HDP G LP +Q SW Sbjct: 134 STQAAGGTNLVLFVDQLGEGDRVDVHDPAGALPRDQASW 172 >ref|YP_004534906.1| hypothetical protein PP1Y_AT22403 [Novosphingobium sp. PP1Y] emb|CCA93088.1| conserved hypothetical protein [Novosphingobium sp. PP1Y] Length = 175 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 49/101 (48%), Positives = 62/101 (61%), Gaps = 1/101 (0%) Query: 1 MVKIDPVVDFRGGLDEA-WNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILF 59 ++ +D VVD GG D A W WAE+ C WR ++ +K PPSW L +Q +AG KGILF Sbjct: 74 ILSVDGVVDLSGGYDPAHWADGWAEWDCSWRRMLRIDKVTPPSWILADQVISAGHKGILF 133 Query: 60 RSSVLKEGCNLVVFNRTLTDQDLISIHDPGGELPLNQLSWP 100 S G NLV+FN LT D + +HDP G LP +Q SWP Sbjct: 134 PSIRHPGGTNLVIFNSNLTADDRLGVHDPDGRLPKDQSSWP 174 >ref|YP_001115251.1| hypothetical protein Bcep1808_6074 [Burkholderia vietnamiensis G4] gb|ABO58996.1| conserved hypothetical protein [Burkholderia vietnamiensis G4] Length = 177 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Query: 2 VKIDPVVDFRGGL-DEAWNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILFR 60 V PVVDF G + W+ W F+CDWR F ++ EPPSW LG++ AAGAKGILF Sbjct: 74 VTAAPVVDFTAGFRGDHWSPLWESFFCDWRRDWFNKRIEPPSWVLGDEVIAAGAKGILFS 133 Query: 61 SSVLKEGCNLVVFNRTLTDQDLISIHDPGGELPLNQLSWPRS 102 S+ G NLV+F L + D + + DP G LP +Q SW S Sbjct: 134 STQAAGGTNLVLFVDQLDNTDRLEVIDPAGALPRDQASWGES 175 >ref|YP_002551389.1| hypothetical protein Avi_9507 [Agrobacterium vitis S4] gb|ACM39263.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 175 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 1/100 (1%) Query: 2 VKIDPVVDFRGGLDEA-WNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILFR 60 V +D V D GG D W++ WAE+ C WR +V +++ P SW L + +AG KGILF Sbjct: 76 VVLDRVADLSGGFDPLLWDATWAEWDCPWRRIVRIDRKIPASWKLSDIVISAGYKGILFP 135 Query: 61 SSVLKEGCNLVVFNRTLTDQDLISIHDPGGELPLNQLSWP 100 S G NLVVF+ L D D + +HDP G LP +Q SWP Sbjct: 136 SLRHAGGTNLVVFSANLIDDDTVEVHDPDGRLPKDQSSWP 175 >ref|YP_004134565.1| res domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV15391.1| RES domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 174 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 1/100 (1%) Query: 2 VKIDPVVDFRGGLD-EAWNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILFR 60 + + + D G D W+SAW E+ C WR + + + P SW L + G +GILF Sbjct: 75 ITLSEIADLSQGFDPNVWDSAWNEWDCAWRQIARIDSKIPSSWKLADLVVTTGLRGILFP 134 Query: 61 SSVLKEGCNLVVFNRTLTDQDLISIHDPGGELPLNQLSWP 100 S G NLV+F L D D +++HDP LP +Q SWP Sbjct: 135 SLRHAGGTNLVIFPANLVDGDKVAVHDPDHRLPTDQSSWP 174 >ref|ZP_05958583.1| LOW QUALITY PROTEIN: RES domain-containing protein [Brucella pinnipedialis B2/94] ref|ZP_06000419.1| LOW QUALITY PROTEIN: RES domain-containing protein [Brucella sp. F5/99] ref|ZP_06099171.1| LOW QUALITY PROTEIN: RES domain-containing protein [Brucella pinnipedialis M292/94/1] gb|EEY02106.1| LOW QUALITY PROTEIN: RES domain-containing protein [Brucella pinnipedialis B2/94] gb|EEY24690.1| LOW QUALITY PROTEIN: RES domain-containing protein [Brucella sp. F5/99] gb|EEZ29072.1| LOW QUALITY PROTEIN: RES domain-containing protein [Brucella pinnipedialis M292/94/1] Length = 116 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Query: 1 MVKIDPVVDFRGGLDEA-WNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILF 59 + + V D G D W+ AWA++ C WR + +K+ PPSW L + +AG +G+LF Sbjct: 15 TITLGEVADLSRGYDPVHWDDAWADWDCPWRKIARIDKKTPPSWKLADDIISAGLRGLLF 74 Query: 60 RSSVLKEGCNLVVFNRTLTDQDLISIHDPGGELPLNQLSWPR 101 S G NLV+F L D + ++DP LP +Q SWP Sbjct: 75 PSLRHAGGTNLVIFPANLMAGDEVDVYDPDNRLPRDQSSWPH 116 >ref|YP_001110405.1| hypothetical protein Bcep1808_6714 [Burkholderia vietnamiensis G4] gb|ABO59602.1| conserved hypothetical protein [Burkholderia vietnamiensis G4] Length = 175 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 50/84 (59%) Query: 18 WNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILFRSSVLKEGCNLVVFNRTL 77 W+ W ++ DWR + F+ EPP+W L + R G GI+F S + G NLVVF L Sbjct: 92 WDDLWHDWREDWRHLKFELHIEPPTWVLSDMVREQGFTGIVFPSQTHESGTNLVVFADRL 151 Query: 78 TDQDLISIHDPGGELPLNQLSWPR 101 D + I ++DP G+LP +Q SWPR Sbjct: 152 GDGNSIEVNDPDGQLPRDQASWPR 175 >ref|ZP_03787022.1| RES domain-containing protein [Brucella ceti str. Cudo] gb|EEH13882.1| RES domain-containing protein [Brucella ceti str. Cudo] Length = 96 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Query: 7 VVDFRGGLDEA-WNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILFRSSVLK 65 + D G D W+ AWA++ C WR + +K+ PPSW L + +AG +G+LF S Sbjct: 1 MADLSRGYDPVHWDDAWADWDCPWRKIARIDKKTPPSWKLADDIISAGLRGLLFPSLRHA 60 Query: 66 EGCNLVVFNRTLTDQDLISIHDPGGELPLNQLSWPR 101 G NLV+F L D + ++DP LP +Q SWP Sbjct: 61 GGTNLVIFPANLMAGDEVDVYDPDNRLPRDQSSWPH 96 >ref|YP_001021529.1| hypothetical protein Mpe_A2338 [Methylibium petroleiphilum PM1] gb|ABM95294.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 175 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 49/86 (56%) Query: 16 EAWNSAWAEFYCDWRSVVFQEKREPPSWALGEQARAAGAKGILFRSSVLKEGCNLVVFNR 75 E W+ W ++ DWR + F+ EPP+W LG+ A G GILF S G N+VVF Sbjct: 90 EPWDELWHDWREDWRHLKFELHIEPPTWVLGDMVLAQGHTGILFPSQANDGGTNIVVFVD 149 Query: 76 TLTDQDLISIHDPGGELPLNQLSWPR 101 L D + + ++DP G LP +Q SW R Sbjct: 150 RLRDGNSVEVNDPDGRLPRDQSSWTR 175