BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0247.p (491 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777921.1| sensor histidine kinase [Herbaspirillum sero... 963 0.0 ref|YP_004753252.1| putative Signal transduction histidine kinas... 759 0.0 emb|CBA30856.1| hypothetical protein Csp_C25650 [Curvibacter put... 489 e-136 ref|ZP_01077039.1| putative Signal transduction histidine kinase... 416 e-114 ref|YP_004315087.1| integral membrane sensor signal transduction... 409 e-112 ref|YP_004483367.1| integral membrane sensor signal transduction... 391 e-106 ref|YP_437157.1| signal transduction histidine kinase [Hahella c... 390 e-106 ref|YP_001343178.1| integral membrane sensor signal transduction... 384 e-104 ref|YP_003898165.1| integral membrane sensor signal transduction... 374 e-101 ref|ZP_01233123.1| putative Signal transduction histidine kinase... 372 e-100 >ref|YP_003777921.1| sensor histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ66013.1| sensor histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 478 Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/478 (99%), Positives = 478/478 (100%) Query: 14 LPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMT 73 +PDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMT Sbjct: 1 MPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMT 60 Query: 74 LPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLP 133 LPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLP Sbjct: 61 LPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLP 120 Query: 134 EARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAAL 193 EARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAAL Sbjct: 121 EARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAAL 180 Query: 194 MPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVP 253 MPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVP Sbjct: 181 MPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVP 240 Query: 254 SLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDA 313 SLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDA Sbjct: 241 SLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDA 300 Query: 314 MRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEIAFTPS 373 MRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEIAFTPS Sbjct: 301 MRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEIAFTPS 360 Query: 374 GINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVPEDAM 433 GINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVPEDAM Sbjct: 361 GINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVPEDAM 420 Query: 434 GTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILPAR 491 GTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILPAR Sbjct: 421 GTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILPAR 478 >ref|YP_004753252.1| putative Signal transduction histidine kinase [Collimonas fungivorans Ter331] gb|AEK62429.1| putative Signal transduction histidine kinase [Collimonas fungivorans Ter331] Length = 504 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/482 (75%), Positives = 420/482 (87%) Query: 9 LLDWLLPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAI 68 LL WLLP +LLGRLSVVM+FGVLVTQVAGGLIW+ QLRSK+E ET+TAAQHLAHSAASA+ Sbjct: 22 LLSWLLPHTLLGRLSVVMVFGVLVTQVAGGLIWSAQLRSKAEVETKTAAQHLAHSAASAV 81 Query: 69 RYFMTLPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLRED 128 R+FM+LP NYRP++IQQLREMGGTRFF+N N V + I D+ LA +A+ TL+ D Sbjct: 82 RFFMSLPANYRPILIQQLREMGGTRFFVNTNDGPVTIHKIADNTLADMALADIGATLKTD 141 Query: 129 LPFLPEARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWI 188 LPFLP RLAFAWPD L V+ GL V DLPD+WVQH L+ KPN APVLVIQ ++E G W+ Sbjct: 142 LPFLPGFRLAFAWPDDLMVSPQGLQVADLPDSWVQHTLLIKPNPAPVLVIQTELEPGNWL 201 Query: 189 YLAALMPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGK 248 YLAALMPNPYFLDSDNPL +RL+LQGLSLA +LLL+ILVVRWTTRPLAAL+DAAEAFGK Sbjct: 202 YLAALMPNPYFLDSDNPLSPERLLLQGLSLATVLLLSILVVRWTTRPLAALSDAAEAFGK 261 Query: 249 GETVPSLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTEL 308 GE P LPETGSRE++KTARAF MRERIKRYL+DRERLFVSISHDLRTPITRLKLRTEL Sbjct: 262 GEAAPELPETGSREFIKTARAFRAMRERIKRYLDDRERLFVSISHDLRTPITRLKLRTEL 321 Query: 309 MDDDAMRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEI 368 +DD+ +R++FH+DLDELDMMVKGALQSVKDSDIHENRTEV+LD L+LRMIRDAR+AGHE+ Sbjct: 322 LDDEHLRSEFHEDLDELDMMVKGALQSVKDSDIHENRTEVKLDTLILRMIRDARMAGHEV 381 Query: 369 AFTPSGINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGV 428 AF +G+ V+AKPLALKRAIGNLFDNAL+YGQKVEIS+ G ++I+IRDHGPGV Sbjct: 382 AFAETGLTVMAKPLALKRAIGNLFDNALHYGQKVEISVAGLINESGSNIQIQIRDHGPGV 441 Query: 429 PEDAMGTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIIL 488 PE+A+ +LF+PY RLEHGR QN+GGMGLGLGI+RNIVQAHGGEL LRNH EGGL+ATI+L Sbjct: 442 PEEALHSLFEPYTRLEHGRDQNAGGMGLGLGIARNIVQAHGGELHLRNHTEGGLVATIVL 501 Query: 489 PA 490 PA Sbjct: 502 PA 503 >emb|CBA30856.1| hypothetical protein Csp_C25650 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 491 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 245/478 (51%), Positives = 332/478 (69%), Gaps = 5/478 (1%) Query: 14 LPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMT 73 LPDSLLGR+ VVM GV+ Q+ G L+WA QLR + AE +A +A +AA +IR+F Sbjct: 14 LPDSLLGRIVVVMALGVISAQLVGTLLWARQLRESARAEALSAGHAIALNAAGSIRFFRD 73 Query: 74 LPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLP 133 LPP +RP++I+QLR MGGTRFFIN N + V V+ + + L ++ L +L Sbjct: 74 LPPQFRPILIEQLRTMGGTRFFINVNKARVPVQPVEGNGLVDAVVEAMQGDLTRNLAGNT 133 Query: 134 EA-RLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAA 192 +A +AFAWP+ L V+ DG V DLPD+WV+ L+ +P APVLVIQ + E GRW+YLA Sbjct: 134 QAPSVAFAWPESLQVSDDGRMVRDLPDSWVEATLLLRPRPAPVLVIQAEFEPGRWLYLAT 193 Query: 193 LMPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETV 252 MP+PYFL++ NPL DR+ LQ ++L L++++L+VR RPL +A AA AFG Sbjct: 194 TMPDPYFLENANPLTWDRVALQLVTLLTALVISVLLVRGLIRPLNKIASAANAFGSDTAP 253 Query: 253 PSLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDD 312 S+PETG+ E +TARAF+ M+ RI+ YL DRERLF+ ISH L+TPI RLKLRTEL+DDD Sbjct: 254 ESVPETGTAELRRTARAFNEMQARIQGYLVDRERLFLGISHGLKTPIMRLKLRTELLDDD 313 Query: 313 AMRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEIAFTP 372 +R +FH+DLD+LD+MVK ALQSVKD+DIHEN T VRLD L+ R+ + I T Sbjct: 314 TLRAEFHEDLDDLDVMVKAALQSVKDTDIHENLTPVRLDTLLARLAQRPIHPDATIECTA 373 Query: 373 SGINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVPEDA 432 ++V+ KPLAL+RA+ NL DNA+ YG++V++ + +G +E+RD GPG+ + + Sbjct: 374 EPVSVLGKPLALERALSNLLDNAVLYGERVQVRL----SLQGSRALVEVRDFGPGIAQAS 429 Query: 433 MGTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILPA 490 M F+P+VRL HG+ QN G GLGLGI+RNI+QAHGGE+ L NH EGGL+ T++L A Sbjct: 430 MSAAFEPHVRLSHGQQQNRTGTGLGLGIARNIIQAHGGEIRLHNHAEGGLVVTVLLAA 487 >ref|ZP_01077039.1| putative Signal transduction histidine kinase [Marinomonas sp. MED121] gb|EAQ64914.1| putative Signal transduction histidine kinase [Marinomonas sp. MED121] Length = 497 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 219/481 (45%), Positives = 311/481 (64%), Gaps = 15/481 (3%) Query: 14 LPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMT 73 L SL G++ +++ GV Q+ IW QL + +E R AQ +A AS I YF + Sbjct: 25 LHHSLTGQILIILALGVTAAQLFSSTIWLKQLAADAEQNVREVAQPMAFRVASTISYFSS 84 Query: 74 LPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLP 133 LP NYR ++I QL+EMGGTRFF+ N+ + + + +S L + I+ TL + L + Sbjct: 85 LPQNYRHIVIDQLQEMGGTRFFVTVNNEEILINELEESPLQNIVIEEFRNTLAKQLG-IT 143 Query: 134 EARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAAL 193 ++AF+ PD L V ++ ++DLP+ W H L+ KP + P+LVIQ+ + W+YLA L Sbjct: 144 NPKIAFSSPDDLHVINNHTRLSDLPERWGHHSLLVKPLTPPILVIQIPINEKDWLYLATL 203 Query: 194 MPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVP 253 MP+PYFLD +P+ D+L +S+ +LLL+ L++R T+PLA LA AAE+FG+G+ P Sbjct: 204 MPDPYFLDDSSPISNDKLFSLAISIMTVLLLSFLIIRRVTKPLAKLARAAESFGQGDYQP 263 Query: 254 SLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDA 313 + E GS E TA AF+ M+ RI+RYL+DRERLF SISHDL+TPITRL+LR E++D++ Sbjct: 264 -VEEVGSEEIRNTAHAFNAMQTRIQRYLDDRERLFASISHDLKTPITRLRLRAEMVDEED 322 Query: 314 MRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRD----ARLAGHEIA 369 R DL++LDM+VKGALQSVK++DIHENR E+ +L+M++D A LA ++ Sbjct: 323 TREAMVRDLEDLDMLVKGALQSVKETDIHENRVEIN----ILKMLKDLQNSAHLAQRDMQ 378 Query: 370 FTPS-GINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGV 428 + + KPLA+KR + NL DN LYYG +V++ + + +LV I I D GPG+ Sbjct: 379 LSGELNQAYVGKPLAIKRCLTNLIDNGLYYGDRVKVEL----DNDDELVTIRILDEGPGI 434 Query: 429 PEDAMGTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIIL 488 P + M +FQPY RL A + GMGLGL I+RNI +AHGGE+ L N PEGGL A +IL Sbjct: 435 PSEKMEKVFQPYTRLTIKHANHPSGMGLGLSIARNIARAHGGEVHLINRPEGGLEAKLIL 494 Query: 489 P 489 P Sbjct: 495 P 495 >ref|YP_004315087.1| integral membrane sensor signal transduction histidine kinase [Marinomonas mediterranea MMB-1] gb|ADZ93251.1| integral membrane sensor signal transduction histidine kinase [Marinomonas mediterranea MMB-1] Length = 484 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 221/476 (46%), Positives = 309/476 (64%), Gaps = 10/476 (2%) Query: 17 SLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMTLPP 76 SL G++ ++M FGV Q+ IW QL++ +E + + H+A A+ + YF +LP Sbjct: 14 SLTGQILIIMAFGVASAQLVSSAIWLRQLQADTEKNVQEVSTHMAFRIAATVSYFSSLPQ 73 Query: 77 NYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLPEAR 136 NYR ++I QL++MGGTRFF+ N + + ++ +S+L ++ D TL L + A Sbjct: 74 NYRHIVIDQLQDMGGTRFFVTLNKEYITIDALPESKLKRIVKDEIHNTLSRQLG-IHTAD 132 Query: 137 LAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAALMPN 196 ++F+ PD L V ++ ++DLP+ W H LM KP + P+++IQ+QV W+YLA+LMP Sbjct: 133 ISFSSPDNLRVINNQTKLSDLPERWGHHSLMMKPLTPPIVIIQIQVSESEWLYLASLMPA 192 Query: 197 PYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVPSLP 256 PYFLD + L DRL S+ +LLLT+L +R TTRPLA LA AAE FGKG+ P L Sbjct: 193 PYFLDESSLLTADRLFSLTASVITVLLLTLLFIRRTTRPLALLAHAAEQFGKGDWKP-LK 251 Query: 257 ETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDAMRT 316 E G+ E KTA AF+ M++RI+RY++DRERLF SISHDL+TPITRL+LR E++D+D R Sbjct: 252 EDGALEVRKTAHAFNDMQKRIQRYVDDRERLFASISHDLKTPITRLRLRAEMLDEDEARD 311 Query: 317 DFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEI-AFTPSGI 375 DL++LDM+VKGALQSVK++DIHENR E+ L+ L+ + A + ++ F Sbjct: 312 AMVRDLEDLDMLVKGALQSVKETDIHENRVELDLERLLKDIQSSANIHITKVQVFGQLQH 371 Query: 376 NVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVPEDAMGT 435 + KPLA+KR +GNL DNALYYG EI I + D + I I D GPG+P D + Sbjct: 372 PYVGKPLAIKRCLGNLIDNALYYGNTAEIFIEDTE----DTLCIRICDKGPGIPLDKIDK 427 Query: 436 LFQPYVRL--EHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILP 489 +FQPY RL EH + GMGLGL I+RNI +AHGGE+ L N P+ GL A ++LP Sbjct: 428 VFQPYTRLVPEHS-GHHPTGMGLGLSIARNIARAHGGEVSLSNRPKKGLEAKLLLP 482 >ref|YP_004483367.1| integral membrane sensor signal transduction histidine kinase [Marinomonas posidonica IVIA-Po-181] gb|AEF56448.1| integral membrane sensor signal transduction histidine kinase [Marinomonas posidonica IVIA-Po-181] Length = 488 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 214/474 (45%), Positives = 297/474 (62%), Gaps = 7/474 (1%) Query: 17 SLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMTLPP 76 SL G++ ++M GV Q W QL S +E R ++H+A A+ + YF +LP Sbjct: 19 SLTGQILIIMALGVASAQFISSTFWLRQLESDTEQNVREVSKHMAFRIAATVSYFTSLPT 78 Query: 77 NYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLPEAR 136 NYR ++I QL++MGGTRFF+ N + + + S L + TL + L + A+ Sbjct: 79 NYRHIVIDQLQDMGGTRFFVTLNKEEILINPLEASPLKDVVKQEVNDTLVKQLG-IHNAK 137 Query: 137 LAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAALMPN 196 +AF+ P L V ++ + DLP+ W H L+ KP + P++VIQ+ + W+YLA+LMP+ Sbjct: 138 IAFSSPSDLHVINNQTRLMDLPERWGHHSLLVKPLTPPIIVIQIPINDKDWLYLASLMPD 197 Query: 197 PYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVPSLP 256 PYFLD + DRL +S+ +LLL+I+++R TRPLA LA AAE FG+G+ P + Sbjct: 198 PYFLDDTTAVSGDRLFSMAMSVITVLLLSIVILRRVTRPLATLARAAERFGQGDWRP-MK 256 Query: 257 ETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDAMRT 316 E GS E TA+AF+ M+ RI+RYL DRERLF +ISHDL+TPITRL+LR E++D+D +R Sbjct: 257 ENGSVEVRNTAKAFNDMQRRIQRYLNDRERLFAAISHDLKTPITRLRLRAEMLDEDDIRD 316 Query: 317 DFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEIAFTPSGIN 376 DL++LDM+VKGALQSVK++DIHENR EV + ++ M A + +I + + Sbjct: 317 AMIRDLEDLDMLVKGALQSVKETDIHENRVEVDISRMLKDMQSTANIQRPKIIIKGALSH 376 Query: 377 -VIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVPEDAMGT 435 I KPLA+KR +GNL DNALYYG+ I I A V I I D GPG+P D + Sbjct: 377 PYIGKPLAIKRCLGNLVDNALYYGKSATIHIEDDDEA----VCIRICDQGPGIPIDKIDK 432 Query: 436 LFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILP 489 +FQPY RL + GMGLGL I+RNI +AHGGE+ L NHPE GL A + LP Sbjct: 433 VFQPYTRLMADHTGHPTGMGLGLSIARNIARAHGGEVTLSNHPEQGLEAKVWLP 486 >ref|YP_437157.1| signal transduction histidine kinase [Hahella chejuensis KCTC 2396] gb|ABC32732.1| Signal transduction histidine kinase [Hahella chejuensis KCTC 2396] Length = 493 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 206/480 (42%), Positives = 297/480 (61%), Gaps = 9/480 (1%) Query: 13 LLPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFM 72 L+P SLL R+ +V++ VL Q LIW Q++++++ + + HLA S AS +R+F Sbjct: 14 LVPRSLLSRMVIVLVIAVLAAQALSSLIWVAQIKTRNQENVLSMSNHLAFSIASTVRFFK 73 Query: 73 TLPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFL 132 +LP YR +++ QLR MGG+RFF+ NS + + D+ L + ++ L+ +L Sbjct: 74 SLPVEYRHIVLDQLRRMGGSRFFVTFNSELINISPTPDTDLKRWVLEEVDSVLQRELGRQ 133 Query: 133 PEARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAA 192 E F++ + L V ++ + + DLP W H L+ P P+LV+Q+ +E W+YLA Sbjct: 134 VEIISEFSFAESLRVFNNDIRLLDLPPGWGHHSLLLHPQKTPILVVQIGLEKDEWLYLAT 193 Query: 193 LMPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETV 252 L+P P L + L +RL G+++ ++L +VVRW TRPL L+ AA+ GK Sbjct: 194 LLPTPDGLIEGDYLPAERLWFMGITVILVVLSLFVVVRWLTRPLKLLSRAADELGKDIER 253 Query: 253 PSLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDD 312 P LPE GS E V AR F+ M+ERI+RY++DRE LF +ISHDL+TPITRL+LR E++DDD Sbjct: 254 PPLPEEGSTEVVAAARTFNSMQERIQRYIQDRETLFSAISHDLKTPITRLRLRAEMLDDD 313 Query: 313 AMRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEIAFTP 372 A R F DL++LD MV GALQ VKD+ +HEN + L L+ ++ A L ++ T Sbjct: 314 AQRGKFIQDLEDLDHMVHGALQCVKDTTVHENPVNIDLHYLLQQICEGADLQRKKV--TL 371 Query: 373 SGI---NVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVP 429 SG+ KPLALKRA N+ DNAL+YG + E+ + EG V + +RD GPGVP Sbjct: 372 SGLLEQPFWGKPLALKRAFSNIIDNALFYGHQAEVFLEDV--QEG--VHVAVRDFGPGVP 427 Query: 430 EDAMGTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILP 489 E +F+PYVRLE R +N+GG GLGL I+RNI+ AHGG L +RNH +GG + + LP Sbjct: 428 EMEQDRIFEPYVRLEKSRNRNTGGSGLGLSIARNIIHAHGGRLKVRNHEQGGFVVEVWLP 487 >ref|YP_001343178.1| integral membrane sensor signal transduction histidine kinase [Marinomonas sp. MWYL1] gb|ABR73243.1| integral membrane sensor signal transduction histidine kinase [Marinomonas sp. MWYL1] Length = 488 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 222/480 (46%), Positives = 303/480 (63%), Gaps = 19/480 (3%) Query: 17 SLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMTLPP 76 SL G++ ++M GV Q IW QL S +E R ++H+A A+ + YF +LP Sbjct: 19 SLTGQILIIMALGVASAQFISSSIWLRQLESDTEENVREVSKHMAFRIAATVSYFTSLPT 78 Query: 77 NYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLPEAR 136 NYR ++I QL++MGGTRFF+ N + + +I DS L + + TL + L + A+ Sbjct: 79 NYRHIVIDQLQDMGGTRFFVTLNKEEILINNIPDSPLKDIVKNEVQSTLVKQLG-IHNAK 137 Query: 137 LAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAALMPN 196 +AF+ P L V ++ + DLP+ W H L+ KP + P++VIQ+ + W+YLA+LMP+ Sbjct: 138 IAFSSPSDLHVINNHTRLVDLPERWGHHSLLVKPLTPPIIVIQIPINDKDWLYLASLMPD 197 Query: 197 PYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVPSLP 256 PYFLD L DRL +S+ +LLL+IL++R TRPLA LA AAE FG+G+ P + Sbjct: 198 PYFLDGTTALSGDRLFSMAMSVITVLLLSILILRRVTRPLATLARAAERFGQGDWQP-IK 256 Query: 257 ETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDAMRT 316 E GS E TA+AF+ M+ RI+RYL DRERLF SISHDL+TPITRL+LR E++D+D +R Sbjct: 257 EVGSVEVRNTAKAFNDMQRRIQRYLNDRERLFASISHDLKTPITRLRLRAEMLDEDDIRD 316 Query: 317 DFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAG--HEIAFTPSG 374 DL++LDM++KGALQSVK++DIHENR EV + RM+RD + H + T G Sbjct: 317 AMIRDLEDLDMLLKGALQSVKETDIHENRVEVNIS----RMLRDMQSTANLHGVKLTVVG 372 Query: 375 ---INVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIR--DHGPGVP 429 I KP A+KR +GNL DNALYYG+ + I E D E+ IR D GPG+P Sbjct: 373 ELQHPFIGKPFAIKRCLGNLVDNALYYGKTATVFI------EDDENEVCIRVCDQGPGIP 426 Query: 430 EDAMGTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILP 489 D M +FQPY RL + + GGMGLGL I+RNI +AHGGE+ L NH GL A + LP Sbjct: 427 IDKMDKVFQPYTRLTPDHSGHPGGMGLGLSIARNIARAHGGEVTLSNHMPQGLEAKLWLP 486 >ref|YP_003898165.1| integral membrane sensor signal transduction histidine kinase [Halomonas elongata DSM 2581] emb|CBV42980.1| integral membrane sensor signal transduction histidine kinase [Halomonas elongata DSM 2581] Length = 496 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 200/476 (42%), Positives = 292/476 (61%), Gaps = 5/476 (1%) Query: 14 LPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMT 73 LP SL GR ++M+ GVL Q+A IW Q R A + ++A+S AS +R+F + Sbjct: 17 LPSSLRGRFLLIMVVGVLGAQLASYSIWTAQARDGQLARLDELSSNIAYSVASTVRFFRS 76 Query: 74 LPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLP 133 LP +YR +++ QLR+MGGTRFF++ N + V IG+ L ID LR+++ + Sbjct: 77 LPYDYRHIVLDQLRDMGGTRFFVSVNDHRIEVDDIGEGSAKALVIDNFHDVLRDEIG-VT 135 Query: 134 EARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAAL 193 +A + F PD L + ++ + + D+P W QH LM+ P S P+LV+Q+ +E G+W+Y+A L Sbjct: 136 DAEVTFTRPDTLRLLNNEVLLRDMPPRWGQHSLMSAPLSQPILVVQLPLERGQWLYVATL 195 Query: 194 MPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVP 253 +P L DRL + + L ++ L+ L +R TR LA L+ AA G P Sbjct: 196 LPVSDVFHDGGWLSGDRLFVALMVLLTVIGLSWLGIRSATRTLARLSRAARRLGDDLDSP 255 Query: 254 SLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDA 313 L E G RE TA AF+ M+ RI+ +E+RERLF +ISHDL+TPITRL+LR E++DD Sbjct: 256 PLSEGGPREVAATAIAFNRMQRRIQHQVEERERLFSAISHDLKTPITRLRLRAEMLDDPM 315 Query: 314 MRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEIAFTPS 373 +R F LDELD +V+GAL SVK D+HE + AL + + L G E+ Sbjct: 316 LRERFCASLDELDQLVRGALDSVKGLDMHEEVEIIEPRALCDELAGEMALQGGEVRVMGE 375 Query: 374 GINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVPEDAM 433 V KPLA KR + NL +NA++YG++ E+ + +P D +++ IRDHGPG+ Sbjct: 376 AAPVAVKPLAFKRCLTNLLENAVFYGRRAEVRLEDTP----DSLQMAIRDHGPGIEPAQR 431 Query: 434 GTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILP 489 +F P+VRLE R++++GG GLGLGI+R+I+QAHGG L L NHPEGGL+ +++LP Sbjct: 432 ERVFSPFVRLEPSRSRHTGGSGLGLGIARHIIQAHGGRLALDNHPEGGLVVSLMLP 487 >ref|ZP_01233123.1| putative Signal transduction histidine kinase [Vibrio angustum S14] gb|EAS65578.1| putative Signal transduction histidine kinase [Vibrio angustum S14] Length = 481 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/484 (39%), Positives = 296/484 (61%), Gaps = 21/484 (4%) Query: 13 LLPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFM 72 L P SL+ R + + V + QV IW Q + + ++ + +A AS + +F Sbjct: 6 LWPKSLVSRTLWLTLLAVFLAQVIATGIWYTQSKKRDLEGLQSTSASMATMFASTVNFFQ 65 Query: 73 TLPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFL 132 +LP YR ++++QLR MGGTRFF++ N + +K I ++ ++A+ V L E LP L Sbjct: 66 SLPLEYRHIVLEQLRNMGGTRFFVSFNDQEINIKPIRNTEQKEMAVSVFKTVLHEKLPTL 125 Query: 133 PEARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAA 192 + F+ P+ L V + + ++DLP +WV + L +P + P+LV+Q++++ +W+Y+AA Sbjct: 126 SNIHVEFSRPETLHVLKNDILLSDLPRSWVHNTLSLEPLNPPILVVQIELDKDQWLYIAA 185 Query: 193 LMPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETV 252 L+P PY + D + +++ S +LL T ++VR TRPL LADAA A Sbjct: 186 LLPAPYMMLKDEIITRQQIIFLTFSTVLLLLFTYIMVRRQTRPLKQLADAANALSLDIYQ 245 Query: 253 PSLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDD 312 P L E G+ E V +AF+ M+ R+++Y+EDRE+LF +ISHDL+TPITRL+LR EL+DDD Sbjct: 246 PPLKEQGASELVMATQAFNRMQLRLRKYIEDREQLFSAISHDLKTPITRLRLRAELIDDD 305 Query: 313 AMRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIR-------DARLAG 365 F+ DLDEL++MVKGALQ VKD+D+HEN + ++ L+ + RL Sbjct: 306 EKIDKFNHDLDELEIMVKGALQCVKDTDLHENLVTIDVEHLLNSIAEHHNHKDTKVRLPQ 365 Query: 366 HEIAFTPSGINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHG 425 H I + ++AKPLALKR + NL DN + YG V +++ SP D + I I D G Sbjct: 366 HPI------LPIMAKPLALKRCLSNLIDNGVKYGHSVTVNVIDSP----DKLIITISDKG 415 Query: 426 PGVPEDAMGTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMAT 485 G+P+ + T+F+PYVRL A ++ G GLG+GISRNIV+AHGG+L ++N +GGL+ Sbjct: 416 QGIPDAKLKTVFEPYVRL----ATDNTGHGLGMGISRNIVRAHGGQLTIKNSIKGGLLVI 471 Query: 486 IILP 489 ++LP Sbjct: 472 VVLP 475