BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0187.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777871.1| short-chain dehydrogenase [Herbaspirillum se... 535 e-150 gb|ACN58875.1| D-xylose 1-dehydrogenase [uncultured bacterium BL... 338 7e-91 ref|YP_556561.1| D-xylose dehydrogenase [Burkholderia xenovorans... 324 8e-87 ref|ZP_08873203.1| short-chain dehydrogenase/reductase SDR [Verm... 322 4e-86 ref|ZP_03268311.1| short-chain dehydrogenase/reductase SDR [Burk... 318 5e-85 ref|YP_003544733.1| SDR-family protein [Sphingobium japonicum UT... 317 1e-84 ref|YP_001892607.1| short-chain dehydrogenase/reductase SDR [Ral... 315 5e-84 ref|YP_004538061.1| short-chain dehydrogenase/reductase SDR [Nov... 315 5e-84 ref|ZP_08388188.1| short chain dehydrogenase family protein [Sph... 314 7e-84 ref|ZP_08870521.1| short-chain dehydrogenase/reductase SDR [Azos... 314 7e-84 >ref|YP_003777871.1| short-chain dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65963.1| short-chain dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 263 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 260/263 (98%), Positives = 261/263 (99%) Query: 1 MTAATTPAFEHALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALV 60 MTAATTPAFEHALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALV Sbjct: 1 MTAATTPAFEHALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALV 60 Query: 61 ASLKDAAIAPRFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYW 120 ASLKDA IAPRFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYW Sbjct: 61 ASLKDAPIAPRFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYW 120 Query: 121 DERLAVNLRHQFFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTH 180 DERLAVNLRHQFFCAQAVLPGMR+RK GVILNFGSISWHLGLPDLTLYMTAKAGIEGMTH Sbjct: 121 DERLAVNLRHQFFCAQAVLPGMRERKQGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTH 180 Query: 181 GMARDFGRDGVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALF 240 GMARDFGRDGVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALF Sbjct: 181 GMARDFGRDGVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALF 240 Query: 241 LSSDSGAKCTGREYYVDAGWLGA 263 LSSDSGAKCTGREYYVDAGWLGA Sbjct: 241 LSSDSGAKCTGREYYVDAGWLGA 263 >gb|ACN58875.1| D-xylose 1-dehydrogenase [uncultured bacterium BLR13] Length = 288 Score = 338 bits (866), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 171/253 (67%), Positives = 203/253 (80%) Query: 11 HALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALVASLKDAAIAP 70 +A Y SLA KRV+ITGGG+GIGAA+V+AFV QGA+V F+DIA E S+ LVASL+ A P Sbjct: 36 YATYPSLADKRVLITGGGTGIGAAIVDAFVKQGARVYFIDIAEEASKELVASLQGAKYPP 95 Query: 71 RFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYWDERLAVNLRH 130 RFFPC+L +LEAL F +IE G ++++INNAAND+RH DVTP YWD+ LAVNLRH Sbjct: 96 RFFPCDLTDLEALATVFAQIEREHGALEVMINNAANDNRHNIEDVTPKYWDDSLAVNLRH 155 Query: 131 QFFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTHGMARDFGRDG 190 QFFCAQAV PGM+ GVILNFGSISWHL L +LTLYMTAKA IEGMT G+ARD G DG Sbjct: 156 QFFCAQAVAPGMKAAGTGVILNFGSISWHLALGNLTLYMTAKAAIEGMTRGLARDLGADG 215 Query: 191 VRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALFLSSDSGAKCT 250 +RVN IIPG++RTPRQ LWHTPE E IL AQCL RV+P DVAA+ALFL+SD+ +C+ Sbjct: 216 IRVNCIIPGSVRTPRQMALWHTPEGEQDILNAQCLHERVEPEDVAAMALFLASDNAGRCS 275 Query: 251 GREYYVDAGWLGA 263 GR+Y+VDAGW GA Sbjct: 276 GRDYFVDAGWYGA 288 >ref|YP_556561.1| D-xylose dehydrogenase [Burkholderia xenovorans LB400] gb|ABE37211.1| D-xylose dehydrogenase [Burkholderia xenovorans LB400] Length = 268 Score = 324 bits (831), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 153/254 (60%), Positives = 196/254 (77%) Query: 9 FEHALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALVASLKDAAI 68 +A+Y SL+GK VVITGGGSGIGAA+VEAF QGA+V FLD+A + S AL SL DA Sbjct: 14 MSYAIYPSLSGKTVVITGGGSGIGAAMVEAFARQGARVFFLDVAEDDSLALQQSLSDAPH 73 Query: 69 APRFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYWDERLAVNL 128 P F C+L +++A+ + F I + G +++L+NNA NDDRH+ +TPAYWDER+AVNL Sbjct: 74 PPLFRRCDLRSVDAIHSAFAGIVEIAGPIEVLVNNAGNDDRHEVDAITPAYWDERMAVNL 133 Query: 129 RHQFFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTHGMARDFGR 188 RHQFFCAQA GMR+ GVILN GS+SWHL LP+L +YM+AKAGIEG+T G+ARD G Sbjct: 134 RHQFFCAQAAAAGMRKIGRGVILNLGSVSWHLALPNLAIYMSAKAGIEGLTRGLARDLGA 193 Query: 189 DGVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALFLSSDSGAK 248 G+RVN IIPGA+RTPRQ LW +PE EAK++A+QCL R++P VA +ALFL+SD ++ Sbjct: 194 AGIRVNCIIPGAVRTPRQMQLWQSPESEAKLVASQCLRLRIEPEHVARMALFLASDDASR 253 Query: 249 CTGREYYVDAGWLG 262 C+GR+Y+VDAGW G Sbjct: 254 CSGRDYFVDAGWYG 267 >ref|ZP_08873203.1| short-chain dehydrogenase/reductase SDR [Verminephrobacter sp. At4] Length = 253 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 150/249 (60%), Positives = 187/249 (75%) Query: 12 ALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALVASLKDAAIAPR 71 A+Y SLAGKRV+ITGGGSGIGAA+VEAF Q A+V F+DIA + S+AL+ L A ++ Sbjct: 4 AIYPSLAGKRVLITGGGSGIGAAMVEAFARQQARVWFIDIAEDASRALLEQLGAANLSAH 63 Query: 72 FFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYWDERLAVNLRHQ 131 F C+L NL+AL +I GG+D+L+NNAANDDRH+ D+TPAYWD+R+AVNLRH Sbjct: 64 FQHCDLSNLDALSTGIRDIAAQAGGMDVLVNNAANDDRHRIEDITPAYWDQRMAVNLRHL 123 Query: 132 FFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTHGMARDFGRDGV 191 F +QAVLP M+ GG I+N GSISWHL LP+L LY TAKAGIEGMT G+ARD G + Sbjct: 124 LFSSQAVLPAMQSAGGGAIVNLGSISWHLALPELVLYETAKAGIEGMTRGLARDLGGYNI 183 Query: 192 RVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALFLSSDSGAKCTG 251 RVN ++PG +RTPRQT LWH P+EEA++L QCL R+DP VAA+ LFL+SD CT Sbjct: 184 RVNCVVPGGVRTPRQTRLWHNPDEEARMLERQCLKERIDPEHVAAMVLFLASDDARMCTA 243 Query: 252 REYYVDAGW 260 + Y+VDAGW Sbjct: 244 QNYFVDAGW 252 >ref|ZP_03268311.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] gb|EEA00119.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] Length = 255 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 144/254 (56%), Positives = 192/254 (75%) Query: 9 FEHALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALVASLKDAAI 68 +A+Y SL+ K +V+TGGGSGIGAA+VEAF QGA+V FLD+A S AL +L+ A Sbjct: 1 MSYAIYPSLSDKTIVVTGGGSGIGAAMVEAFAQQGARVFFLDVAEHDSLALQEALRHAKH 60 Query: 69 APRFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYWDERLAVNL 128 P+F C+L N++A+ +TF I G +D+L+NNA NDDRH+ ++T +YWD+R+AVNL Sbjct: 61 PPKFRRCDLKNVDAIESTFAAIVDAAGPIDVLVNNAGNDDRHEIGELTASYWDDRIAVNL 120 Query: 129 RHQFFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTHGMARDFGR 188 RH FFCAQA MR+ GVILN GS+SWH+ LP+L +YMTAKAGIEG+T G+ARD G Sbjct: 121 RHHFFCAQAAAKSMRRAGRGVILNLGSVSWHVALPNLAIYMTAKAGIEGLTRGLARDLGG 180 Query: 189 DGVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALFLSSDSGAK 248 G+RVN IIPGA++TPRQ LW + E EAK++A+QCL R++P VA +ALFL+SD ++ Sbjct: 181 VGIRVNCIIPGAVKTPRQMQLWQSAESEAKVVASQCLQLRIEPEHVARMALFLASDDASR 240 Query: 249 CTGREYYVDAGWLG 262 C+GR+Y+VDAGW G Sbjct: 241 CSGRDYFVDAGWYG 254 >ref|YP_003544733.1| SDR-family protein [Sphingobium japonicum UT26S] dbj|BAI96121.1| SDR-family protein [Sphingobium japonicum UT26S] Length = 252 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 161/249 (64%), Positives = 193/249 (77%), Gaps = 1/249 (0%) Query: 12 ALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALVASLKDAAIAPR 71 A+Y SL GKRV I+GGGSGIG LVEAF QGA+V F DIA E S+A+ LK A P Sbjct: 4 AVYPSLKGKRVFISGGGSGIGEGLVEAFAAQGARVAFCDIAQEESEAVAERLKGADFPPI 63 Query: 72 FFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYWDERLAVNLRHQ 131 F PC+L ++EA++A +E +GGVDILINNAANDDRH +VTPAYWDER+AVNLRH Sbjct: 64 FHPCDLRDIEAVQAMIATVEEQLGGVDILINNAANDDRHGIEEVTPAYWDERMAVNLRHL 123 Query: 132 FFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTHGMARDFGRDGV 191 FF AQAV+P M++ GGVILNFGSISWHL LPDL LY TAKAGIEG+T +ARD GRD + Sbjct: 124 FFAAQAVVPAMKRAGGGVILNFGSISWHLALPDLVLYQTAKAGIEGLTRSLARDLGRDNI 183 Query: 192 RVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALFLSSDSGAKCTG 251 RVN IIPG ++TPRQ + W+TPE EA+I+AAQCL R+ P DVAALA+FL+SD CTG Sbjct: 184 RVNTIIPGNVKTPRQ-MKWYTPEGEAEIVAAQCLNGRIMPADVAALAMFLASDDARMCTG 242 Query: 252 REYYVDAGW 260 +Y++DAGW Sbjct: 243 HDYFIDAGW 251 >ref|YP_001892607.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12J] ref|YP_002984109.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12D] gb|ACD29180.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12J] gb|ACS65437.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12D] Length = 255 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 160/254 (62%), Positives = 191/254 (75%) Query: 9 FEHALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALVASLKDAAI 68 +A+Y SL K VVITGGGSGIGAA+VE F QGA+V FLDIA S+AL +SL + Sbjct: 1 MSYAIYPSLVNKNVVITGGGSGIGAAIVEGFAKQGARVTFLDIARADSEALASSLGECVH 60 Query: 69 APRFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYWDERLAVNL 128 P F C+L +++ L ATF++IE G +D+LINNAANDDRH+ VT AYWD R+ VNL Sbjct: 61 PPVFRYCDLRDIDTLNATFSDIEADTGPIDVLINNAANDDRHQIGTVTQAYWDNRIEVNL 120 Query: 129 RHQFFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTHGMARDFGR 188 RHQFFCAQAVLP M++R GVILN GSISWHL DL +YMTAKAGIEG+T G+ARD G Sbjct: 121 RHQFFCAQAVLPSMKKRGHGVILNLGSISWHLAQADLAIYMTAKAGIEGLTRGLARDLGG 180 Query: 189 DGVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALFLSSDSGAK 248 G+RVN I+PGA+RTPRQ LW +PE EAK+L QCL RVDP VA +ALFL+SD A+ Sbjct: 181 FGIRVNCIVPGAVRTPRQMALWQSPESEAKLLGEQCLHERVDPEHVARMALFLASDDAAR 240 Query: 249 CTGREYYVDAGWLG 262 CT REY+VDAGW G Sbjct: 241 CTAREYFVDAGWYG 254 >ref|YP_004538061.1| short-chain dehydrogenase/reductase SDR [Novosphingobium sp. PP1Y] emb|CCA90094.1| short-chain dehydrogenase/reductase SDR [Novosphingobium sp. PP1Y] Length = 260 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 146/250 (58%), Positives = 184/250 (73%), Gaps = 1/250 (0%) Query: 11 HALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALVASLKDAAIAP 70 HA+Y SL+GKRV++TGG SGIG +VEAF QGAQV FLDI E S ALV L +A P Sbjct: 11 HAIYPSLSGKRVIVTGGASGIGEGMVEAFTLQGAQVTFLDIQEEASLALVKRLANAPFKP 70 Query: 71 RFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYWDERLAVNLRH 130 F C++ ++EA + T +GG D+LINNA NDDRH D+TP YWDER+AVNLRH Sbjct: 71 DFELCDITDIEAFGQVLDRMLTSLGGCDVLINNAGNDDRHAIEDITPDYWDERMAVNLRH 130 Query: 131 QFFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTHGMARDFGRDG 190 QFF A+AV+P M+ G I+N GSISWHLGL DL +Y TAKA IEG+T +AR+ GR G Sbjct: 131 QFFAAKAVIPAMKAAGSGSIINLGSISWHLGLEDLVIYQTAKAAIEGLTRSLARELGRSG 190 Query: 191 VRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALFLSSDSGAKCT 250 +RVN++IPG ++TPRQ + W++PE EA+I+AAQCL R+ P D+AA+ALFL+SD G CT Sbjct: 191 IRVNSVIPGNVQTPRQ-MQWYSPEGEAEIVAAQCLDGRIQPQDIAAMALFLASDDGRFCT 249 Query: 251 GREYYVDAGW 260 Y+VDAGW Sbjct: 250 SHNYWVDAGW 259 >ref|ZP_08388188.1| short chain dehydrogenase family protein [Sphingomonas sp. S17] gb|EGI55488.1| short chain dehydrogenase family protein [Sphingomonas sp. S17] Length = 261 Score = 314 bits (805), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 161/261 (61%), Positives = 193/261 (73%), Gaps = 2/261 (0%) Query: 1 MTAATTPAFEHALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALV 60 M T+ A A Y SL KRV++TGGGSGIG LVEAFV QGA+V F+DIA + SQALV Sbjct: 1 MLQTTSAADLTARYPSLIDKRVIVTGGGSGIGEGLVEAFVAQGARVAFVDIAEDASQALV 60 Query: 61 ASLK-DAAIAPRFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAY 119 L DA AP C+L NL++L+ F ++E +GGVDIL+NNA NDDRH DVTPAY Sbjct: 61 DRLSGDARHAPVHRRCDLTNLDSLKTIFADLEAALGGVDILVNNAGNDDRHSIEDVTPAY 120 Query: 120 WDERLAVNLRHQFFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMT 179 WDERL VNLRHQFF AQAV+P M++ GG ILNFGSISWHLGL DL LY T KA IEG+T Sbjct: 121 WDERLNVNLRHQFFAAQAVIPAMKRAGGGAILNFGSISWHLGLNDLVLYQTCKAAIEGLT 180 Query: 180 HGMARDFGRDGVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALAL 239 +ARD GR+ +RVN I+PG ++TPRQ W+TPE EA+I+AAQCL R+ P DVAAL L Sbjct: 181 RSLARDLGRENIRVNTIVPGNVQTPRQE-KWYTPEGEAEIVAAQCLDGRIQPSDVAALVL 239 Query: 240 FLSSDSGAKCTGREYYVDAGW 260 FL+SD CTG +Y++DAGW Sbjct: 240 FLASDDAKMCTGHDYFIDAGW 260 >ref|ZP_08870521.1| short-chain dehydrogenase/reductase SDR [Azospirillum amazonense Y2] gb|EGX99884.1| short-chain dehydrogenase/reductase SDR [Azospirillum amazonense Y2] Length = 265 Score = 314 bits (805), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 157/251 (62%), Positives = 191/251 (76%), Gaps = 2/251 (0%) Query: 11 HALYRSLAGKRVVITGGGSGIGAALVEAFVGQGAQVCFLDIAAEPSQALVASLKD-AAIA 69 HA+Y SL GKRV++TGGGSGIGAA+ EAFV QGAQV FLDIA S+AL SL + AA A Sbjct: 15 HAIYPSLQGKRVIVTGGGSGIGAAITEAFVRQGAQVSFLDIAETDSRALEQSLAEGAAHA 74 Query: 70 PRFFPCNLMNLEALRATFTEIETVMGGVDILINNAANDDRHKTADVTPAYWDERLAVNLR 129 P+F+ C+L NL+ L+AT EI+ G VD+L+NNAANDDRH +TP YWD R+AVNLR Sbjct: 75 PKFYKCDLTNLDQLKATLAEIQNA-GPVDVLVNNAANDDRHTIEQITPEYWDNRMAVNLR 133 Query: 130 HQFFCAQAVLPGMRQRKGGVILNFGSISWHLGLPDLTLYMTAKAGIEGMTHGMARDFGRD 189 H FF +QAV+PGM+ ++ G I+NFGSISWH+ LP+L +Y TAKAGIEGMT +ARD G Sbjct: 134 HMFFASQAVVPGMKAQRSGAIINFGSISWHVALPELLMYQTAKAGIEGMTRSLARDLGEH 193 Query: 190 GVRVNAIIPGAIRTPRQTLLWHTPEEEAKILAAQCLPTRVDPHDVAALALFLSSDSGAKC 249 VRV ++PG +RT RQ LWH PEEEA+IL+ QCL RVDP VAA+ LFL+SD G C Sbjct: 194 NVRVTCVVPGGVRTERQMRLWHNPEEEARILSQQCLKERVDPPHVAAMVLFLASDDGRMC 253 Query: 250 TGREYYVDAGW 260 T EY+VDAGW Sbjct: 254 TSHEYFVDAGW 264