BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0183.p (418 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777867.1| AraC family xylose operon transcription regu... 863 0.0 ref|YP_004753804.1| Xylose activator XylR (AraC family) [Collimo... 660 0.0 ref|ZP_03266654.1| transcriptional regulator, AraC family [Burkh... 568 e-160 ref|ZP_04948784.1| Helix-turn-helix protein [Burkholderia dolosa... 568 e-160 ref|ZP_02882350.1| transcriptional regulator, AraC family [Burkh... 568 e-160 ref|ZP_02468249.1| xylose operon regluatory protein [Burkholderi... 566 e-159 ref|YP_552720.1| AraC family transcriptional regulator [Burkhold... 563 e-158 ref|YP_001584179.1| AraC family transcriptional regulator [Burkh... 563 e-158 ref|ZP_03569449.1| transcriptional regulator, AraC family [Burkh... 563 e-158 ref|YP_003608748.1| AraC family transcriptional regulator [Burkh... 563 e-158 >ref|YP_003777867.1| AraC family xylose operon transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65959.1| AraC family xylose operon transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 442 Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/418 (100%), Positives = 418/418 (100%) Query: 1 VAKAPTVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGH 60 VAKAPTVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGH Sbjct: 25 VAKAPTVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGH 84 Query: 61 GIIADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEA 120 GIIADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEA Sbjct: 85 GIIADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEA 144 Query: 121 GLQHFALFSLPESDCNRWAQERERIFTDLTGADGIAGHIYRGVGTSAQSWDTAVEQQIAW 180 GLQHFALFSLPESDCNRWAQERERIFTDLTGADGIAGHIYRGVGTSAQSWDTAVEQQIAW Sbjct: 145 GLQHFALFSLPESDCNRWAQERERIFTDLTGADGIAGHIYRGVGTSAQSWDTAVEQQIAW 204 Query: 181 VRSLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQ 240 VRSLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQ Sbjct: 205 VRSLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQ 264 Query: 241 GSVEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQY 300 GSVEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQY Sbjct: 265 GSVEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQY 324 Query: 301 ACQGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHAAEIA 360 ACQGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHAAEIA Sbjct: 325 ACQGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHAAEIA 384 Query: 361 VSCGFTSVQYMHAVFKRELGCTPREYQEQFAAGLERAAAPAARQKKKSAGTTLLEPTR 418 VSCGFTSVQYMHAVFKRELGCTPREYQEQFAAGLERAAAPAARQKKKSAGTTLLEPTR Sbjct: 385 VSCGFTSVQYMHAVFKRELGCTPREYQEQFAAGLERAAAPAARQKKKSAGTTLLEPTR 442 >ref|YP_004753804.1| Xylose activator XylR (AraC family) [Collimonas fungivorans Ter331] gb|AEK62981.1| Xylose activator XylR (AraC family) [Collimonas fungivorans Ter331] Length = 408 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/386 (81%), Positives = 344/386 (89%), Gaps = 1/386 (0%) Query: 6 TVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHGIIAD 65 TVHRIALLFNGNKIFDR+IIAGIGEY+SSTRASWDL+LEEDFRCR QGIERW GHGIIAD Sbjct: 12 TVHRIALLFNGNKIFDRDIIAGIGEYLSSTRASWDLFLEEDFRCRLQGIERWQGHGIIAD 71 Query: 66 FDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAGLQHF 125 FDDP AAL V LPVVA+GGSYAD + YP + PYVATDN+K+VKLAYDHLIEAGLQ F Sbjct: 72 FDDPEACAALSRVSLPVVAVGGSYADAADYPGDTPYVATDNFKLVKLAYDHLIEAGLQRF 131 Query: 126 ALFSLPESDCNRWAQERERIFTDLTGADGIAGHIYRGVGTSAQSWDTAVEQQIAWVRSLP 185 A FSLP++D NRWAQERE+ F L DG+ G IYRG+GTSA SWDTAVEQQIAW+++LP Sbjct: 132 ACFSLPQADVNRWAQEREKAFESLMQRDGMQGEIYRGLGTSAPSWDTAVEQQIAWLQTLP 191 Query: 186 KPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQGSVEM 245 KP+GIIAVTDARARQLLQACL AGIAVPEQVALIGIDNDPLAR+LTR+PLSSVIQG+ EM Sbjct: 192 KPIGIIAVTDARARQLLQACLCAGIAVPEQVALIGIDNDPLARILTRVPLSSVIQGTREM 251 Query: 246 GRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQYACQGI 305 GRTAAHLLHQMLHG R TRI+VPP GINVLASSRHE +HPHVMQA+HFIRQYACQGI Sbjct: 252 GRTAAHLLHQMLHGGRLAGTRILVPPAGINVLASSRHEAPSHPHVMQAMHFIRQYACQGI 311 Query: 306 KTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHA-AEIAVSCG 364 KT+QVADYVG+SRSSLEWYFRRELGRSVHDEILRFKLD AK +L+ + AEIAVSCG Sbjct: 312 KTEQVADYVGVSRSSLEWYFRRELGRSVHDEILRFKLDVAKDMLQHKDQRSIAEIAVSCG 371 Query: 365 FTSVQYMHAVFKRELGCTPREYQEQF 390 FTSVQYMHAVFKRELGCTPREYQ++ Sbjct: 372 FTSVQYMHAVFKRELGCTPREYQDRL 397 >ref|ZP_03266654.1| transcriptional regulator, AraC family [Burkholderia sp. H160] gb|EEA01786.1| transcriptional regulator, AraC family [Burkholderia sp. H160] Length = 422 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/401 (68%), Positives = 321/401 (80%), Gaps = 6/401 (1%) Query: 3 KAP-TVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHG 61 +AP T HRIALLFN NK++DREII GIG Y+ STR +WDL+LEEDFRCR GI+R+ G G Sbjct: 21 QAPQTTHRIALLFNANKVYDREIITGIGNYLLSTRVAWDLFLEEDFRCRLAGIQRFDGDG 80 Query: 62 IIADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAG 121 IIADFDDP AL LPVVA+G SY DP+QYP + PY+ATDN K+V LAY HLI AG Sbjct: 81 IIADFDDPAVDEALRDCPLPVVAVGSSYEDPTQYPTDLPYIATDNSKLVSLAYTHLIGAG 140 Query: 122 LQHFALFSLPESDCNRWAQERERIFTDLTGADG-----IAGHIYRGVGTSAQSWDTAVEQ 176 L++FAL+SLP++ NRWAQ+RE F L ADG I IYRG+ TSA SW+ A+EQ Sbjct: 141 LENFALYSLPQAQENRWAQQRELAFGHLRSADGRSAAQIDSEIYRGLSTSAPSWNQAIEQ 200 Query: 177 QIAWVRSLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLS 236 AW+R LPKPVGIIAVTDARAR LLQACL AGI VPE+VA+IGIDNDPL R LTRIPLS Sbjct: 201 LTAWLRQLPKPVGIIAVTDARARHLLQACLIAGIPVPEEVAIIGIDNDPLTRTLTRIPLS 260 Query: 237 SVIQGSVEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHF 296 SVIQG+ EMGRTAAH+LHQMLHGARFP RI+VPPVGINVL S+RH+ P+VM+A HF Sbjct: 261 SVIQGTEEMGRTAAHILHQMLHGARFPGRRILVPPVGINVLESTRHQPLASPYVMRARHF 320 Query: 297 IRQYACQGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHA 356 IRQYACQGI+T+QVADYVG+SRSSLE YFRREL +VH EILR KLD AK LL + + + Sbjct: 321 IRQYACQGIRTEQVADYVGVSRSSLEEYFRRELQCTVHQEILRHKLDVAKTLLAKRDASS 380 Query: 357 AEIAVSCGFTSVQYMHAVFKRELGCTPREYQEQFAAGLERA 397 AE+A+ CGFTS+QYM+AVF+RELGCTPREYQE+ A + A Sbjct: 381 AEVAIRCGFTSLQYMYAVFRRELGCTPREYQERVGAKAKTA 421 >ref|ZP_04948784.1| Helix-turn-helix protein [Burkholderia dolosa AUO158] gb|EAY71955.1| Helix-turn-helix protein [Burkholderia dolosa AUO158] Length = 447 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/389 (70%), Positives = 319/389 (82%), Gaps = 4/389 (1%) Query: 3 KAPTVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHGI 62 A T HRIALLFN NK++DREII+GIGEY+ STR +WDL+LE+DFRCR GIER+ G GI Sbjct: 56 SAQTPHRIALLFNANKVYDREIISGIGEYLRSTRVAWDLFLEDDFRCRLAGIERFDGDGI 115 Query: 63 IADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAGL 122 IADFDDP AL G LP+VA+G SY DP+QYP + PY+ATDN K+V LAY HLI AGL Sbjct: 116 IADFDDPAVADALAGSPLPIVAVGSSYEDPTQYPDDLPYIATDNAKLVSLAYTHLIGAGL 175 Query: 123 QHFALFSLPESDCNRWAQERERIFTDLTGADGIAGHIYRGVGTSAQSWDTAVEQQIAWVR 182 HFA++SLP + NRWAQ+RE F L ADG+ IYRG+ TSA +W+ A+EQ I W+ Sbjct: 176 PHFAMYSLPVAQQNRWAQQRELAFDRLARADGLDAPIYRGLSTSASAWNHAIEQLIGWLN 235 Query: 183 SLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQGS 242 +LPKPVG+IAVTDARAR LLQACL AGIAVPEQVA+IGIDNDPL R LTRIPLSSVIQG+ Sbjct: 236 ALPKPVGVIAVTDARARHLLQACLIAGIAVPEQVAIIGIDNDPLTRTLTRIPLSSVIQGT 295 Query: 243 VEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQYAC 302 EMGRTAAHLLHQML GARFP RI+VPPVGINVL S+RHE PHVM+A HFIRQYAC Sbjct: 296 EEMGRTAAHLLHQMLRGARFPGRRILVPPVGINVLESTRHEPLASPHVMRARHFIRQYAC 355 Query: 303 QGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSH--AAEIA 360 QGIKT+QVADYVG+SRS LE +FRREL R+VH EILR KL+AAK LL AG H +AE+A Sbjct: 356 QGIKTEQVADYVGVSRSLLEEHFRRELQRTVHQEILRHKLEAAKALL--AGRHVSSAEVA 413 Query: 361 VSCGFTSVQYMHAVFKRELGCTPREYQEQ 389 + CGFTS+QYM+AVF+RELGCTPRE+QE+ Sbjct: 414 IRCGFTSLQYMYAVFRRELGCTPREFQER 442 >ref|ZP_02882350.1| transcriptional regulator, AraC family [Burkholderia graminis C4D1M] gb|EDT12595.1| transcriptional regulator, AraC family [Burkholderia graminis C4D1M] Length = 407 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/400 (68%), Positives = 320/400 (80%), Gaps = 7/400 (1%) Query: 6 TVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHGIIAD 65 T HRIALLFN NK++DREII GIG Y+ STR +WDL+LE+DFRCR GIER+ G GIIAD Sbjct: 9 TTHRIALLFNANKVYDREIITGIGNYLLSTRVAWDLFLEDDFRCRLTGIERFDGDGIIAD 68 Query: 66 FDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAGLQHF 125 FDDP + AL LPVVA+G S+ DP+QYP + PY+ATDN K+V LAY HLI AGL+HF Sbjct: 69 FDDPAVSEALRDCPLPVVAVGSSFEDPAQYPPDLPYIATDNSKLVSLAYTHLIGAGLEHF 128 Query: 126 ALFSLPESDCNRWAQERERIFTDLTGADG-----IAGHIYRGVGTSAQSWDTAVEQQIAW 180 AL+SLP++ NRWAQ+RE F L ADG I IYRG+ TSA SW+ A EQ AW Sbjct: 129 ALYSLPQAQENRWAQQRELAFAHLRNADGHSAEQIQSEIYRGLSTSAPSWNQATEQLTAW 188 Query: 181 VRSLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQ 240 +R LPKPVGIIAVTDARAR LLQACL AGI VPE+VA+IGIDNDPL R LTRIPLSSVIQ Sbjct: 189 LRELPKPVGIIAVTDARARHLLQACLIAGIPVPEEVAIIGIDNDPLTRTLTRIPLSSVIQ 248 Query: 241 GSVEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQY 300 G+ EMGRTAAHLLHQMLHGARFP RI+VPPVGINVL S+RH+ P+VM+A HFIRQY Sbjct: 249 GTEEMGRTAAHLLHQMLHGARFPGRRILVPPVGINVLESTRHQPLASPYVMRARHFIRQY 308 Query: 301 ACQGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHAAEIA 360 ACQGI+T+QVADYVG+SRSSLE YFRRE +VH EILR KLD AK LL + + +AE+A Sbjct: 309 ACQGIRTEQVADYVGVSRSSLEEYFRRERKCTVHQEILRHKLDVAKALLAKRDASSAEVA 368 Query: 361 VSCGFTSVQYMHAVFKRELGCTPREYQEQFAAGLERAAAP 400 + CGFTS+QYM+AVF+RELGCTPREYQE+ A L +A+ P Sbjct: 369 IRCGFTSLQYMYAVFRRELGCTPREYQER--ASLTQASTP 406 >ref|ZP_02468249.1| xylose operon regluatory protein [Burkholderia thailandensis MSMB43] Length = 397 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 274/392 (69%), Positives = 321/392 (81%), Gaps = 4/392 (1%) Query: 3 KAPTVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHGI 62 A T HRIALLFN NK++DREII GIG+Y+ STR +WDL+LE+DFRCR GIER+ G GI Sbjct: 6 SARTPHRIALLFNANKVYDREIIGGIGDYLRSTRVAWDLFLEDDFRCRLAGIERFDGDGI 65 Query: 63 IADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAGL 122 IADFDDP AL G LP+VA+G SY DP+QYPA+ PY+ATDN K+V LAY HLI AGL Sbjct: 66 IADFDDPAVADALAGSPLPIVAVGSSYEDPAQYPADLPYIATDNAKLVSLAYTHLIGAGL 125 Query: 123 QHFALFSLPESDCNRWAQERERIFTDLTGADGIAGHIYRGVGTSAQSWDTAVEQQIAWVR 182 FA++SLP + NRWA++RER F L ADG+ +YRG+ TSA +W+ A+EQ I W+R Sbjct: 126 PRFAMYSLPVARQNRWAEQRERAFDRLARADGLDAPVYRGLSTSASAWNHAIEQLIGWLR 185 Query: 183 SLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQGS 242 +LPKPVG+IAVTDARAR LLQACL AGI VPEQVA++GIDNDPL R LTRIPLSSVIQG+ Sbjct: 186 ALPKPVGVIAVTDARARHLLQACLIAGIPVPEQVAIVGIDNDPLTRTLTRIPLSSVIQGT 245 Query: 243 VEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQYAC 302 EMGRTAAHLLHQML GARFP RI+VPPVGINVL S+RH+ PHVM+A HFIRQYAC Sbjct: 246 GEMGRTAAHLLHQMLGGARFPGRRILVPPVGINVLESTRHQPLASPHVMRARHFIRQYAC 305 Query: 303 QGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHA--AEIA 360 QGIKT+QVADYVG+SRS LE +FRREL R+VH EILR KL+AA+ LL AG HA AE+A Sbjct: 306 QGIKTEQVADYVGVSRSLLEEHFRRELRRTVHQEILRHKLEAAQALL--AGRHASSAEVA 363 Query: 361 VSCGFTSVQYMHAVFKRELGCTPREYQEQFAA 392 + CGFTS+QYMHAVF+RELGCTPREYQE+ A+ Sbjct: 364 IRCGFTSLQYMHAVFRRELGCTPREYQERAAS 395 >ref|YP_552720.1| AraC family transcriptional regulator [Burkholderia xenovorans LB400] gb|ABE33370.1| transcriptional regulator, AraC family [Burkholderia xenovorans LB400] Length = 405 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 272/389 (69%), Positives = 313/389 (80%), Gaps = 5/389 (1%) Query: 6 TVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHGIIAD 65 T HRIALLFN NK++DREII GIG Y+ STR +WDL+LEEDFRCR GIER+ G GIIAD Sbjct: 9 TSHRIALLFNANKVYDREIITGIGNYLLSTRVAWDLFLEEDFRCRLTGIERFDGDGIIAD 68 Query: 66 FDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAGLQHF 125 FDDP AL LPVVA+G S+ DP+ YP + PY+ATDN K+V LAY HLI AGL+HF Sbjct: 69 FDDPAVGEALRDCPLPVVAVGSSFEDPAHYPPDLPYIATDNSKLVSLAYTHLIGAGLEHF 128 Query: 126 ALFSLPESDCNRWAQERERIFTDLTGADG-----IAGHIYRGVGTSAQSWDTAVEQQIAW 180 AL+SLP++ NRWAQ+RE F L ADG I G IYRG+ TSA SW+ A EQ AW Sbjct: 129 ALYSLPQAQENRWAQQRELAFAHLRSADGRSTAQIDGEIYRGLSTSAPSWNQATEQLTAW 188 Query: 181 VRSLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQ 240 +R LPKPVGIIAVTDARAR LLQACL AGI VPE+VA+IGIDNDPL R LTRIPLSSVIQ Sbjct: 189 LRDLPKPVGIIAVTDARARHLLQACLIAGIPVPEEVAIIGIDNDPLTRTLTRIPLSSVIQ 248 Query: 241 GSVEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQY 300 G+ EMGRTAAHLLHQMLHGARFP RI+VPPVGINVL S+RH+ P+VM+A HFIRQY Sbjct: 249 GTEEMGRTAAHLLHQMLHGARFPGRRILVPPVGINVLESTRHQPLASPYVMRARHFIRQY 308 Query: 301 ACQGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHAAEIA 360 ACQGI+T+QVADYVG+SRSSLE YFRRE +VH EILR KLD AK LL + + +AE+A Sbjct: 309 ACQGIRTEQVADYVGVSRSSLEEYFRRERQCTVHQEILRHKLDVAKALLAKRDASSAEVA 368 Query: 361 VSCGFTSVQYMHAVFKRELGCTPREYQEQ 389 + CGFTS+QYM+AVF+RELGCTPREYQE+ Sbjct: 369 IRCGFTSLQYMYAVFRRELGCTPREYQER 397 >ref|YP_001584179.1| AraC family transcriptional regulator [Burkholderia multivorans ATCC 17616] ref|YP_001948692.1| LacI family transcriptional regulator [Burkholderia multivorans ATCC 17616] ref|ZP_03583009.1| transcriptional regulator, AraC family [Burkholderia multivorans CGD1] gb|ABX17887.1| transcriptional regulator, AraC family [Burkholderia multivorans ATCC 17616] dbj|BAG46156.1| LacI family transcriptional regulator [Burkholderia multivorans ATCC 17616] gb|EEE03182.1| transcriptional regulator, AraC family [Burkholderia multivorans CGD1] Length = 397 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 269/387 (69%), Positives = 314/387 (81%) Query: 3 KAPTVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHGI 62 APT HRIALLFN NK++DREII+GIG+Y+ STR WDL+LE+DFRCR GIER+ G GI Sbjct: 6 SAPTPHRIALLFNANKVYDREIISGIGQYLHSTRVVWDLFLEDDFRCRLAGIERFDGDGI 65 Query: 63 IADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAGL 122 IADFDDP AL G LP+VA+G SY DPS YP PY+ATDN K+V LAY HLI AGL Sbjct: 66 IADFDDPAVADALAGSPLPIVAVGSSYEDPSHYPDGVPYIATDNPKLVSLAYTHLIGAGL 125 Query: 123 QHFALFSLPESDCNRWAQERERIFTDLTGADGIAGHIYRGVGTSAQSWDTAVEQQIAWVR 182 HFA++SLP + NRWAQ+RE F L ADG+ IYRG+ T+A W+ A+EQ I W+ Sbjct: 126 PHFAMYSLPAAQENRWAQQRELAFDRLARADGLDAPIYRGLPTTASGWNHAIEQLIGWLN 185 Query: 183 SLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQGS 242 +LPKPVG+IAVTDARAR LLQACL AGIAVPEQVA+IGIDNDPL R LTRIPLSSVIQG+ Sbjct: 186 ALPKPVGVIAVTDARARHLLQACLIAGIAVPEQVAIIGIDNDPLTRTLTRIPLSSVIQGT 245 Query: 243 VEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQYAC 302 EMGRTAAHLLH+ML GARFP RI+VPPVGINVL S+RH+ PHVM+A HFIRQYAC Sbjct: 246 EEMGRTAAHLLHRMLRGARFPGQRILVPPVGINVLESTRHQPVASPHVMRARHFIRQYAC 305 Query: 303 QGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHAAEIAVS 362 QGIKT+QVADYVG+SRS LE +FRREL R+VH EILR KL+AA+ LL + +AE+A+ Sbjct: 306 QGIKTEQVADYVGVSRSLLEEHFRRELQRTVHQEILRHKLEAAQALLASRNASSAEVAIR 365 Query: 363 CGFTSVQYMHAVFKRELGCTPREYQEQ 389 CGFTS+QYM+AVF+RELGCTPREYQE+ Sbjct: 366 CGFTSLQYMYAVFRRELGCTPREYQER 392 >ref|ZP_03569449.1| transcriptional regulator, AraC family [Burkholderia multivorans CGD2M] ref|ZP_03576093.1| transcriptional regulator, AraC family [Burkholderia multivorans CGD2] gb|EEE09436.1| transcriptional regulator, AraC family [Burkholderia multivorans CGD2] gb|EEE15356.1| transcriptional regulator, AraC family [Burkholderia multivorans CGD2M] Length = 397 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 269/387 (69%), Positives = 314/387 (81%) Query: 3 KAPTVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHGI 62 APT HRIALLFN NK++DREII+GIG+Y+ STR WDL+LE+DFRCR GIER+ G GI Sbjct: 6 SAPTPHRIALLFNANKVYDREIISGIGQYLHSTRVVWDLFLEDDFRCRLAGIERFDGDGI 65 Query: 63 IADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAGL 122 IADFDDP AL G LP+VA+G SY DPS YP PY+ATDN K+V LAY HLI AGL Sbjct: 66 IADFDDPAVADALAGSPLPIVAVGSSYEDPSHYPDGVPYIATDNPKLVSLAYTHLIGAGL 125 Query: 123 QHFALFSLPESDCNRWAQERERIFTDLTGADGIAGHIYRGVGTSAQSWDTAVEQQIAWVR 182 HFA++SLP + NRWAQ+RE F L ADG+ IYRG+ T+A W+ A+EQ I W+ Sbjct: 126 PHFAMYSLPAAQENRWAQQRELAFDRLARADGLDAPIYRGLPTTASGWNHAIEQLIDWLN 185 Query: 183 SLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLSSVIQGS 242 +LPKPVG+IAVTDARAR LLQACL AGIAVPEQVA+IGIDNDPL R LTRIPLSSVIQG+ Sbjct: 186 ALPKPVGVIAVTDARARHLLQACLIAGIAVPEQVAIIGIDNDPLTRTLTRIPLSSVIQGT 245 Query: 243 VEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHFIRQYAC 302 EMGRTAAHLLH+ML GARFP RI+VPPVGINVL S+RH+ PHVM+A HFIRQYAC Sbjct: 246 EEMGRTAAHLLHRMLRGARFPGQRILVPPVGINVLESTRHQPVASPHVMRARHFIRQYAC 305 Query: 303 QGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHAAEIAVS 362 QGIKT+QVADYVG+SRS LE +FRREL R+VH EILR KL+AA+ LL + +AE+A+ Sbjct: 306 QGIKTEQVADYVGVSRSLLEEHFRRELQRTVHQEILRHKLEAAQALLASRNASSAEVAIR 365 Query: 363 CGFTSVQYMHAVFKRELGCTPREYQEQ 389 CGFTS+QYM+AVF+RELGCTPREYQE+ Sbjct: 366 CGFTSLQYMYAVFRRELGCTPREYQER 392 >ref|YP_003608748.1| AraC family transcriptional regulator [Burkholderia sp. CCGE1002] gb|ADG19237.1| transcriptional regulator, AraC family [Burkholderia sp. CCGE1002] Length = 406 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 271/393 (68%), Positives = 317/393 (80%), Gaps = 6/393 (1%) Query: 3 KAP-TVHRIALLFNGNKIFDREIIAGIGEYISSTRASWDLYLEEDFRCRPQGIERWAGHG 61 +AP T HRIALLFN NK++DREII GIG Y+ STR +WDL+LEEDFRCR GI+R+ G G Sbjct: 5 QAPQTTHRIALLFNANKVYDREIITGIGNYLLSTRVAWDLFLEEDFRCRLAGIQRFDGDG 64 Query: 62 IIADFDDPVTTAALEGVQLPVVAIGGSYADPSQYPANRPYVATDNYKMVKLAYDHLIEAG 121 IIADFDDP AL LPVVA+G SY DP+QYP++ PY+ATDN K+V LAY HLI AG Sbjct: 65 IIADFDDPAVDEALRDCPLPVVAVGSSYEDPTQYPSDLPYIATDNSKLVSLAYTHLIGAG 124 Query: 122 LQHFALFSLPESDCNRWAQERERIFTDLTGADG-----IAGHIYRGVGTSAQSWDTAVEQ 176 L++FAL+SLP++ NRWAQ+RE F L ADG I IYRG+ TSA SW+ A+EQ Sbjct: 125 LENFALYSLPQAQENRWAQQRELAFAHLRSADGRSAAQIDSEIYRGLSTSAPSWNQAIEQ 184 Query: 177 QIAWVRSLPKPVGIIAVTDARARQLLQACLFAGIAVPEQVALIGIDNDPLARVLTRIPLS 236 W+R LPKPVGIIAVTDARAR LLQACL AGI VPE+VA+IGIDNDPL R LTRIPLS Sbjct: 185 LTTWLRQLPKPVGIIAVTDARARHLLQACLIAGIPVPEEVAIIGIDNDPLTRTLTRIPLS 244 Query: 237 SVIQGSVEMGRTAAHLLHQMLHGARFPDTRIMVPPVGINVLASSRHEVRNHPHVMQALHF 296 SVIQG+ EMGRTAAH+LHQMLHGARFP RI+VPPVGINVL S+RH+ P+VM+A HF Sbjct: 245 SVIQGTEEMGRTAAHILHQMLHGARFPGRRILVPPVGINVLESTRHQPLASPYVMRARHF 304 Query: 297 IRQYACQGIKTDQVADYVGISRSSLEWYFRRELGRSVHDEILRFKLDAAKRLLEQAGSHA 356 IRQYACQGI+T+QVADYVG+SRSSLE YFRRE +VH EILR KLD AK LL + + + Sbjct: 305 IRQYACQGIRTEQVADYVGVSRSSLEEYFRRERQCTVHQEILRHKLDVAKSLLAKRDASS 364 Query: 357 AEIAVSCGFTSVQYMHAVFKRELGCTPREYQEQ 389 AE+A+ CGFTS+QYM+AVF+RELGCTPREYQE+ Sbjct: 365 AEVAIRCGFTSLQYMYAVFRRELGCTPREYQER 397