BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0099.p         (306 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777796.1| hypothetical protein Hsero_4421 [Herbaspiril...   638   0.0  

>ref|YP_003777796.1| hypothetical protein Hsero_4421 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65888.1| hypothetical protein Hsero_4421 [Herbaspirillum seropedicae SmR1]
          Length = 323

 Score =  638 bits (1645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/306 (100%), Positives = 306/306 (100%)

Query: 1   MDFNQRISELLNIRPTVLNADGILRECVRIEQDNPYIPSGFLWVLEYKRGQVSKLRGDKP 60
           MDFNQRISELLNIRPTVLNADGILRECVRIEQDNPYIPSGFLWVLEYKRGQVSKLRGDKP
Sbjct: 18  MDFNQRISELLNIRPTVLNADGILRECVRIEQDNPYIPSGFLWVLEYKRGQVSKLRGDKP 77

Query: 61  GAVAHARRAVALNPYNEDLIREYRDLVANASTIKNLALIISCKKYEQKALSLQRQYEEAG 120
           GAVAHARRAVALNPYNEDLIREYRDLVANASTIKNLALIISCKKYEQKALSLQRQYEEAG
Sbjct: 78  GAVAHARRAVALNPYNEDLIREYRDLVANASTIKNLALIISCKKYEQKALSLQRQYEEAG 137

Query: 121 IESLIISGHDTEAINHPRAVQVAAPDNYEGLPRKTVAACTWVYENVGRNVGILKVDDDQT 180
           IESLIISGHDTEAINHPRAVQVAAPDNYEGLPRKTVAACTWVYENVGRNVGILKVDDDQT
Sbjct: 138 IESLIISGHDTEAINHPRAVQVAAPDNYEGLPRKTVAACTWVYENVGRNVGILKVDDDQT 197

Query: 181 LFDPVRARQLLDQLHTLNVYAGVPVSGTTHDRNWHWNKCQDKALNTISYGKPFWRHWAMG 240
           LFDPVRARQLLDQLHTLNVYAGVPVSGTTHDRNWHWNKCQDKALNTISYGKPFWRHWAMG
Sbjct: 198 LFDPVRARQLLDQLHTLNVYAGVPVSGTTHDRNWHWNKCQDKALNTISYGKPFWRHWAMG 257

Query: 241 GAYYLGPGPLEKLVMTMMRFPGLFDGEYYEDKLVGDALMVEQVPLKELAGYEDFGLSLTA 300
           GAYYLGPGPLEKLVMTMMRFPGLFDGEYYEDKLVGDALMVEQVPLKELAGYEDFGLSLTA
Sbjct: 258 GAYYLGPGPLEKLVMTMMRFPGLFDGEYYEDKLVGDALMVEQVPLKELAGYEDFGLSLTA 317

Query: 301 QHRFNS 306
           QHRFNS
Sbjct: 318 QHRFNS 323