BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0098.p (356 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777795.1| SAM-dependent methyltransferase [Herbaspiril... 738 0.0 ref|ZP_08880627.1| SAM-dependent methyltransferase [Saccharopoly... 172 9e-41 ref|ZP_01979018.1| hypothetical protein A5A_0240 [Vibrio cholera... 126 6e-27 ref|YP_001753903.1| type 11 methyltransferase [Methylobacterium ... 121 2e-25 gb|AAS83045.1| hypothetical protein pRhico105 [Azospirillum bras... 87 5e-15 ref|YP_004872470.1| hypothetical protein GNIT_2380 [Glaciecola n... 85 2e-14 ref|ZP_08409028.1| exopolysaccharide biosynthesis [Pseudoalterom... 85 2e-14 >ref|YP_003777795.1| SAM-dependent methyltransferase [Herbaspirillum seropedicae SmR1] emb|CAM32678.1| SAM-dependent methyltransferase protein [Herbaspirillum seropedicae] gb|ADJ65887.1| SAM-dependent methyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 356 Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/356 (99%), Positives = 356/356 (100%) Query: 1 VTAASFFIKPGYRARTQPEYYADVHDDGTIWQPEVYPLAATLARQYGCRYIIDIGCGRAR 60 +TAASFFIKPGYRARTQPEYYADVHDDGTIWQPEVYPLAATLARQYGCRYIIDIGCGRAR Sbjct: 1 MTAASFFIKPGYRARTQPEYYADVHDDGTIWQPEVYPLAATLARQYGCRYIIDIGCGRAR 60 Query: 61 KLSMMYPEFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSDGVQFPPEVLQNAVVINSDV 120 KLSMMYPEFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSDGVQFPPEVLQNAVVINSDV Sbjct: 61 KLSMMYPEFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSDGVQFPPEVLQNAVVINSDV 120 Query: 121 IEHLVNPTRLMALIRSYLVHAKVAVISTPERDLERGTHDMGPPANPTHIREWNLAELETM 180 IEHLVNPTRLMALIRSYLVHAKVAVISTPERDLERGTHDMGPPANPTHIREWNLAELETM Sbjct: 121 IEHLVNPTRLMALIRSYLVHAKVAVISTPERDLERGTHDMGPPANPTHIREWNLAELETM 180 Query: 181 LSSEGLRPAYCGLTISNDRDMLRKTSLAVVPGLSLNSSAVRELGAFCEKWLAASPEMRDA 240 LSSEGLRPAYCGLTISNDRDMLRKTSLAVVPGLSLNSSAVRELGAFCEKWLAASPEMRDA Sbjct: 181 LSSEGLRPAYCGLTISNDRDMLRKTSLAVVPGLSLNSSAVRELGAFCEKWLAASPEMRDA 240 Query: 241 GNGQYLQNLAQLEREMASAQSAAQPLLAPMSPLEIGMEHIAAARYEEAFKVLTEALQNDG 300 GNGQYLQNLAQLEREMASAQSAAQPLLAPMSPLEIGMEHIAAARYEEAFKVLTEALQNDG Sbjct: 241 GNGQYLQNLAQLEREMASAQSAAQPLLAPMSPLEIGMEHIAAARYEEAFKVLTEALQNDG 300 Query: 301 ENPAVVFQLGRLAAICNMPEDAKELFYQAALRAPEIVKDIFDFYQEQLARARAGLE 356 ENPAVVFQLGRLAAICNMPEDAKELFYQAALRAPEIVKDIFDFYQEQLARARAGLE Sbjct: 301 ENPAVVFQLGRLAAICNMPEDAKELFYQAALRAPEIVKDIFDFYQEQLARARAGLE 356 >ref|ZP_08880627.1| SAM-dependent methyltransferase [Saccharopolyspora spinosa NRRL 18395] Length = 227 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 124/208 (59%), Gaps = 5/208 (2%) Query: 7 FIKPGYRARTQPEYYADVHDDGTIWQPEVYPLAATLARQYGCRYIIDIGCGRARKLSMM- 65 +++ GY R PEY+ D+ D+G WQP+VYP LA+Q+ R IID+GCGRA KL + Sbjct: 12 YLRHGYTPRVPPEYFVDI-DNGITWQPDVYPEVLVLAQQHDRRVIIDLGCGRAGKLVALA 70 Query: 66 --YPEFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSDGVQFPPEVLQNAVVINSDVIEH 123 +P ++G+DFG N+E CRA P G W++ DLE + + EV+ +VV+ SDV+EH Sbjct: 71 AQHPHLDLVGIDFGPNIEWCRANLPVGRWLDADLEAATTLPLDTEVIARSVVVCSDVLEH 130 Query: 124 LVNPTRLMALIRSYLVH-AKVAVISTPERDLERGTHDMGPPANPTHIREWNLAELETMLS 182 L++P M LI L A AV+STP RD GT ++GPPANP+H+REW E + Sbjct: 131 LIDPRPAMRLICWLLDRGAACAVVSTPARDKRAGTENLGPPANPSHVREWAQDEFRAFVE 190 Query: 183 SEGLRPAYCGLTISNDRDMLRKTSLAVV 210 S GLT S+D T L V+ Sbjct: 191 SFPAAIERFGLTRSDDSGGGMTTQLVVL 218 >ref|ZP_01979018.1| hypothetical protein A5A_0240 [Vibrio cholerae MZO-2] gb|ABI85331.1| hypothetical protein [Vibrio cholerae] gb|EDM54107.1| hypothetical protein A5A_0240 [Vibrio cholerae MZO-2] Length = 491 Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 104/207 (50%), Gaps = 3/207 (1%) Query: 5 SFFIKPGYRARTQPEYYADVHDDGTIWQPEVYPLAATLARQYGCRYIIDIGCGRARKLSM 64 +F+ Y R++ Y D + T +QP VY LA Q +Y+IDIGCG A KL Sbjct: 2 KYFLPKDYSIRSEHVLYTDAPSELT-YQPYVYKLAEHFVDQANLKYVIDIGCGSAGKLKN 60 Query: 65 MYPEFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSDGVQFPPEVLQNAVVINSDVIEHL 124 + + +IIG D + + P G ++E DLE + EV++ +V+I SDVIEHL Sbjct: 61 LANKCKIIGFDSPVGVAMAKNTIPKGEFIEQDLEKTLPA-LDKEVIEQSVIICSDVIEHL 119 Query: 125 VNPTRLMALIRSYLVHAKVAVISTPERDLERGTHDMGPPANPTHIREWNLAELETMLSSE 184 P L + + A ++STP+RD RG D GPPANP H+ EWN E L Sbjct: 120 QQPDNLASQLAKLAKVAPFVIVSTPDRDRSRGWLDQGPPANPAHVMEWNGTEFVRFLKEN 179 Query: 185 GLRPA-YCGLTISNDRDMLRKTSLAVV 210 G + G TI+ D + T + V Sbjct: 180 GFESVPFHGNTINTDHHCAKSTLITVT 206 >ref|YP_001753903.1| type 11 methyltransferase [Methylobacterium radiotolerans JCM 2831] gb|ACB23220.1| Methyltransferase type 11 [Methylobacterium radiotolerans JCM 2831] Length = 510 Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 119/213 (55%), Gaps = 7/213 (3%) Query: 4 ASFFIKPGYRARTQPEYYADVHDDGTIW--QPEVYPLAATLARQYGCRYIIDIGCGRARK 61 + F+ Y R +YY D + + QPE+Y A L+R+ G IID+GCG K Sbjct: 4 SDLFLPSWYERRVAVDYYDDRIGENLLLRHQPEIYGFAEYLSRKDGRSTIIDLGCGTGNK 63 Query: 62 L-SMMYPEFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSDGVQFPPEVLQN-AVVINSD 119 + S +Y +IIG+D G NL+ + ++ VE DLE D +P ++ N VV+ +D Sbjct: 64 IKSNVYS--KIIGVDQGVNLDAFKRRHKNARAVEGDLEVCD-FPWPADLAWNEVVVVCAD 120 Query: 120 VIEHLVNPTRLMALIRSYLVHAKVAVISTPERDLERGTHDMGPPANPTHIREWNLAELET 179 VIEHL++PT L++ + V ++S+P+RD G ++ PPANP H++EW L EL Sbjct: 121 VIEHLIDPTCLLSELAKLTNAGAVVLLSSPDRDRVYGGQNVSPPANPCHVQEWTLKELCQ 180 Query: 180 MLSSEGLRPAYCGLTISNDRDMLRKTSLAVVPG 212 ++ S + ++ G TIS++ + TSL + G Sbjct: 181 LIRSSNVPVSFSGYTISDNMIRRKATSLIISDG 213 >gb|AAS83045.1| hypothetical protein pRhico105 [Azospirillum brasilense] Length = 347 Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 25/204 (12%) Query: 1 VTAASFFIKPGYRARTQPEYY-ADVHDDGTIWQPE--------VYPLAATLARQYGCR-Y 50 + A ++F+K GY + T E A+ D T W+ E VY A +AR R + Sbjct: 109 MKANNYFLKAGYVSLTAVETVEAEPGDYWTPWRIEMASIYQWHVYEAARDVARGMPERPH 168 Query: 51 IIDIGCGRARKLS-MMYP---EFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSD---GV 103 ++D+GCG KL ++ P + +D + A +P +V VDLE D G Sbjct: 169 VLDVGCGYPIKLHRLLAPASASASVTVVDQPTLAGRIAADFPELRFVPVDLERPDADLGA 228 Query: 104 QFPPEVLQNAVVINSDVIEHLVNPTRLMALIRSYLVHAKVAVISTPERDLERGTHDMGPP 163 +F +VI SDV+EHL++P +A I+ +L VAV STPERD+ RG + P Sbjct: 229 RF-------GLVICSDVLEHLLDPDPCVAFIKRHLAPGGVAVFSTPERDILRGRDCLRSP 281 Query: 164 ANPTHIREWNLAELETMLSSEGLR 187 P H+REWN E + S G R Sbjct: 282 -KPEHVREWNREEFVRYIESHGFR 304 >ref|YP_004872470.1| hypothetical protein GNIT_2380 [Glaciecola nitratireducens FR1064] gb|AEP30477.1| hypothetical protein GNIT_2380 [Glaciecola nitratireducens FR1064] Length = 638 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%) Query: 6 FFIKPGYRARTQPEYYADVHDDGTIWQPEVYPLAATLARQYGCRYIIDIGCGRARKLSMM 65 F + Y +R + +Y D D WQ EVY A L I+D+G G K Sbjct: 444 FSLPAQYISRNKYHHYDD-SDCEDEWQLEVYLHALGLMTTNSFSNIVDVGTGSGYKFMKY 502 Query: 66 YPEFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSDGVQFPPEVLQNAVVINSDVIEHLV 125 + ++ +G++ N++ +YP W D + V VVI SD+IEHLV Sbjct: 503 FSQYNTLGLELPVNVDLLMQKYPDKRWKVSDFTSE-------RVFSADVVICSDIIEHLV 555 Query: 126 NPTRLMALIRSYLVHAKVAVISTPERDL---ERGTHDMGPPANPTHIREWNLAELETMLS 182 +P L+ + + K V+STP+RDL + GPP N H REW+ +E +S Sbjct: 556 DPDDLLIFLNAQ--DFKYLVLSTPDRDLVYPKTSVFQAGPPRNFAHQREWSFSEFADYVS 613 Query: 183 S 183 + Sbjct: 614 T 614 >ref|ZP_08409028.1| exopolysaccharide biosynthesis [Pseudoalteromonas haloplanktis ANT/505] gb|EGI73895.1| exopolysaccharide biosynthesis [Pseudoalteromonas haloplanktis ANT/505] Length = 636 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 84/187 (44%), Gaps = 22/187 (11%) Query: 8 IKPGYRARTQPEYYA-------DVHDDGTIWQPEVYPLAATLARQYGCRYIIDIGCGRAR 60 + P Y+ Y A D+ W+ EVY A L + I D+GCG Sbjct: 433 LTPEYKYEMDQRYCARKVFHQYDIQSHEDEWRLEVYLHALGLMVKNRFTSIADVGCGSGF 492 Query: 61 KLSMMYPEFQIIGMDFGSNLEHCRAQYPFGNWVEVDLENSDGVQFPPEVLQNAVVINSDV 120 KL + ++ +G++ N+ + +YP NW D S VQ + V+I SDV Sbjct: 493 KLMTYFKDYSTLGLELPKNVNVLKEKYPDNNWKVSDF--SSQVQ----EISTDVIICSDV 546 Query: 121 IEHLVNPTRLMALIRSYLVHAKVA--VISTPERDLERGTHD---MGPPANPTHIREWNLA 175 IE +VNP L+ SYL ++ST R+L D GPP N TH REWN Sbjct: 547 IEQIVNPDALL----SYLDRQSFEYLILSTSARELIYSKDDPAMFGPPKNLTHQREWNFE 602 Query: 176 ELETMLS 182 E ++ LS Sbjct: 603 EFQSYLS 609